Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_I22
(631 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29095-13|CAA82357.1| 810|Caenorhabditis elegans Hypothetical p... 279 1e-75
Z22181-15|CAA80191.1| 810|Caenorhabditis elegans Hypothetical p... 279 1e-75
Z22181-14|CAI46590.1| 516|Caenorhabditis elegans Hypothetical p... 279 1e-75
AF326940-1|AAG49390.1| 810|Caenorhabditis elegans replication l... 279 1e-75
AC025716-11|AAK39605.1| 823|Caenorhabditis elegans Yeast mcm (l... 176 1e-44
AF016427-3|AAB65356.1| 730|Caenorhabditis elegans Yeast mcm (li... 172 2e-43
Z50874-6|CAA90765.1| 759|Caenorhabditis elegans Hypothetical pr... 157 6e-39
Z81039-5|CAB02770.1| 812|Caenorhabditis elegans Hypothetical pr... 150 7e-37
AL023828-7|CAA19452.1| 881|Caenorhabditis elegans Hypothetical ... 146 9e-36
Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical pr... 30 1.2
U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin pro... 30 1.2
Z83220-2|CAB05701.2| 905|Caenorhabditis elegans Hypothetical pr... 29 2.7
AF026213-9|AAB71302.2| 615|Caenorhabditis elegans Protein kinas... 29 2.7
U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore co... 28 4.8
Z70205-11|CAD44096.1| 409|Caenorhabditis elegans Hypothetical p... 27 8.4
Z68003-6|CAD44105.1| 409|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z49938-2|CAA90187.1| 306|Caenorhabditis elegans Hypothetical pr... 27 8.4
U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical pr... 27 8.4
AL034543-2|CAA22515.1| 1696|Caenorhabditis elegans Hypothetical ... 27 8.4
>Z29095-13|CAA82357.1| 810|Caenorhabditis elegans Hypothetical
protein ZK632.1a protein.
Length = 810
Score = 279 bits (684), Expect = 1e-75
Identities = 139/211 (65%), Positives = 166/211 (78%), Gaps = 2/211 (0%)
Frame = +1
Query: 4 RGSSAAGLTAAVVKDEESFDFVIEAGALMLADNGVCCIDEFDKMDPTDQVAIHEAMEQQT 183
+ SSAAGLTAAVVKDEESF+FVIEAGALMLADNGVCCIDEFDKMD DQVAIHEAMEQQT
Sbjct: 423 KASSAAGLTAAVVKDEESFEFVIEAGALMLADNGVCCIDEFDKMDLKDQVAIHEAMEQQT 482
Query: 184 ISLAKAGVRATLNARTSILAAANPIGGRYDRAKSLQQNVALSAPIMSRFDLFFILIDESS 363
IS+ KAGV+ATLNAR SILAAANP+ GRYDR++ L+ NV +SAPIMSRFDLFF+L+DE +
Sbjct: 483 ISITKAGVKATLNARASILAAANPVNGRYDRSRPLKYNVQMSAPIMSRFDLFFVLVDECN 542
Query: 364 EMVDYAIARKIVDLH--CNKEETYDCVYSREDLLRYIAFARSFKPIITEEAGKLLVEYYT 537
E+ DYAIAR+I+D H ++ D VY +D+ +YIAFAR FKP I+++A + LV Y
Sbjct: 543 EVTDYAIARRILDNHRAISEHTERDSVYKIDDIKKYIAFARCFKPKISDKAAETLVREYK 602
Query: 538 VVXXXXXXXXXXXXXXITVRQLESMVRLAEA 630
+ ITVRQLES+VRL+EA
Sbjct: 603 KLRMSDSNNAATSSWRITVRQLESLVRLSEA 633
>Z22181-15|CAA80191.1| 810|Caenorhabditis elegans Hypothetical
protein ZK632.1a protein.
Length = 810
Score = 279 bits (684), Expect = 1e-75
Identities = 139/211 (65%), Positives = 166/211 (78%), Gaps = 2/211 (0%)
Frame = +1
Query: 4 RGSSAAGLTAAVVKDEESFDFVIEAGALMLADNGVCCIDEFDKMDPTDQVAIHEAMEQQT 183
+ SSAAGLTAAVVKDEESF+FVIEAGALMLADNGVCCIDEFDKMD DQVAIHEAMEQQT
Sbjct: 423 KASSAAGLTAAVVKDEESFEFVIEAGALMLADNGVCCIDEFDKMDLKDQVAIHEAMEQQT 482
Query: 184 ISLAKAGVRATLNARTSILAAANPIGGRYDRAKSLQQNVALSAPIMSRFDLFFILIDESS 363
IS+ KAGV+ATLNAR SILAAANP+ GRYDR++ L+ NV +SAPIMSRFDLFF+L+DE +
Sbjct: 483 ISITKAGVKATLNARASILAAANPVNGRYDRSRPLKYNVQMSAPIMSRFDLFFVLVDECN 542
Query: 364 EMVDYAIARKIVDLH--CNKEETYDCVYSREDLLRYIAFARSFKPIITEEAGKLLVEYYT 537
E+ DYAIAR+I+D H ++ D VY +D+ +YIAFAR FKP I+++A + LV Y
Sbjct: 543 EVTDYAIARRILDNHRAISEHTERDSVYKIDDIKKYIAFARCFKPKISDKAAETLVREYK 602
Query: 538 VVXXXXXXXXXXXXXXITVRQLESMVRLAEA 630
+ ITVRQLES+VRL+EA
Sbjct: 603 KLRMSDSNNAATSSWRITVRQLESLVRLSEA 633
>Z22181-14|CAI46590.1| 516|Caenorhabditis elegans Hypothetical
protein ZK632.1b protein.
Length = 516
Score = 279 bits (684), Expect = 1e-75
Identities = 139/211 (65%), Positives = 166/211 (78%), Gaps = 2/211 (0%)
Frame = +1
Query: 4 RGSSAAGLTAAVVKDEESFDFVIEAGALMLADNGVCCIDEFDKMDPTDQVAIHEAMEQQT 183
+ SSAAGLTAAVVKDEESF+FVIEAGALMLADNGVCCIDEFDKMD DQVAIHEAMEQQT
Sbjct: 129 KASSAAGLTAAVVKDEESFEFVIEAGALMLADNGVCCIDEFDKMDLKDQVAIHEAMEQQT 188
Query: 184 ISLAKAGVRATLNARTSILAAANPIGGRYDRAKSLQQNVALSAPIMSRFDLFFILIDESS 363
IS+ KAGV+ATLNAR SILAAANP+ GRYDR++ L+ NV +SAPIMSRFDLFF+L+DE +
Sbjct: 189 ISITKAGVKATLNARASILAAANPVNGRYDRSRPLKYNVQMSAPIMSRFDLFFVLVDECN 248
Query: 364 EMVDYAIARKIVDLH--CNKEETYDCVYSREDLLRYIAFARSFKPIITEEAGKLLVEYYT 537
E+ DYAIAR+I+D H ++ D VY +D+ +YIAFAR FKP I+++A + LV Y
Sbjct: 249 EVTDYAIARRILDNHRAISEHTERDSVYKIDDIKKYIAFARCFKPKISDKAAETLVREYK 308
Query: 538 VVXXXXXXXXXXXXXXITVRQLESMVRLAEA 630
+ ITVRQLES+VRL+EA
Sbjct: 309 KLRMSDSNNAATSSWRITVRQLESLVRLSEA 339
>AF326940-1|AAG49390.1| 810|Caenorhabditis elegans replication
licensing factor MCM2/3/5-type protein protein.
Length = 810
Score = 279 bits (684), Expect = 1e-75
Identities = 139/211 (65%), Positives = 166/211 (78%), Gaps = 2/211 (0%)
Frame = +1
Query: 4 RGSSAAGLTAAVVKDEESFDFVIEAGALMLADNGVCCIDEFDKMDPTDQVAIHEAMEQQT 183
+ SSAAGLTAAVVKDEESF+FVIEAGALMLADNGVCCIDEFDKMD DQVAIHEAMEQQT
Sbjct: 423 KASSAAGLTAAVVKDEESFEFVIEAGALMLADNGVCCIDEFDKMDLKDQVAIHEAMEQQT 482
Query: 184 ISLAKAGVRATLNARTSILAAANPIGGRYDRAKSLQQNVALSAPIMSRFDLFFILIDESS 363
IS+ KAGV+ATLNAR SILAAANP+ GRYDR++ L+ NV +SAPIMSRFDLFF+L+DE +
Sbjct: 483 ISITKAGVKATLNARASILAAANPVNGRYDRSRPLKYNVQMSAPIMSRFDLFFVLVDECN 542
Query: 364 EMVDYAIARKIVDLH--CNKEETYDCVYSREDLLRYIAFARSFKPIITEEAGKLLVEYYT 537
E+ DYAIAR+I+D H ++ D VY +D+ +YIAFAR FKP I+++A + LV Y
Sbjct: 543 EVTDYAIARRILDNHRAISEHTERDSVYKIDDIKKYIAFARCFKPKISDKAAETLVREYK 602
Query: 538 VVXXXXXXXXXXXXXXITVRQLESMVRLAEA 630
+ ITVRQLES+VRL+EA
Sbjct: 603 KLRMSDSNNAATSSWRITVRQLESLVRLSEA 633
>AC025716-11|AAK39605.1| 823|Caenorhabditis elegans Yeast mcm
(licensing factor) relatedprotein 4 protein.
Length = 823
Score = 176 bits (428), Expect = 1e-44
Identities = 90/212 (42%), Positives = 138/212 (65%), Gaps = 3/212 (1%)
Frame = +1
Query: 4 RGSSAAGLTAAVVKDEESFDFVIEAGALMLADNGVCCIDEFDKMDPTDQVAIHEAMEQQT 183
+GSSA GLTA+V +D ++ V++ GAL+LADNGVCCIDEFDKM+ + + +HE MEQQT
Sbjct: 495 KGSSAVGLTASVSRDADTKQLVLQTGALVLADNGVCCIDEFDKMNESARSVLHEVMEQQT 554
Query: 184 ISLAKAGVRATLNARTSILAAANPIGGRYDRAKSLQQNVALSAPIMSRFDLFFILIDESS 363
+S+AKAG+ LNAR S+LAAANP+ +++R K++ +N+ L ++SRFDL F+++D
Sbjct: 555 LSIAKAGIICQLNARASVLAAANPVDSKWNRNKTIVENITLPHTLLSRFDLIFLIVDAQD 614
Query: 364 EMVDYAIARKIVDLHCNKEETYD-CVYSREDLLR-YIAFAR-SFKPIITEEAGKLLVEYY 534
EM D + +V L+ + + + +LLR YIA+A+ + P ++EEA + ++E Y
Sbjct: 615 EMQDRRLGNHLVSLYFENDGNQEKTEHVDMNLLRDYIAYAKANIHPKLSEEASQFIIEKY 674
Query: 535 TVVXXXXXXXXXXXXXXITVRQLESMVRLAEA 630
+ RQLES++RL+EA
Sbjct: 675 LFMRKAGAQHGQITAY---PRQLESLIRLSEA 703
>AF016427-3|AAB65356.1| 730|Caenorhabditis elegans Yeast mcm
(licensing factor) relatedprotein 7 protein.
Length = 730
Score = 172 bits (418), Expect = 2e-43
Identities = 92/212 (43%), Positives = 129/212 (60%), Gaps = 3/212 (1%)
Frame = +1
Query: 4 RGSSAAGLTAAVVKDEESFDFVIEAGALMLADNGVCCIDEFDKMDPTDQVAIHEAMEQQT 183
RGSS GLTAAV+KD + + +E GAL+LAD G+CCIDEFDKM D+ AIHE MEQQT
Sbjct: 416 RGSSGVGLTAAVMKDPVTGEMSLEGGALVLADGGICCIDEFDKMMDHDRTAIHEVMEQQT 475
Query: 184 ISLAKAGVRATLNARTSILAAANPIGGRYDRAKSLQQNVALSAPIMSRFDLFFILIDESS 363
IS+AKAG+ TLNART+I+AAANP GRY+ +S++QNV L A ++SRFDL ++ D++
Sbjct: 476 ISIAKAGIMTTLNARTAIIAAANPAYGRYNPNRSIEQNVDLPAALLSRFDLILLMQDKAD 535
Query: 364 EMVDYAIARKIVDLH---CNKEETYDCVYSREDLLRYIAFARSFKPIITEEAGKLLVEYY 534
D +A I +H C+ + S E L YI+ +++ P + + +VE Y
Sbjct: 536 RENDKILAEHITYVHQHGCHPNREKKDLISLETLREYISLCKTYTPTVDPALRERIVEAY 595
Query: 535 TVVXXXXXXXXXXXXXXITVRQLESMVRLAEA 630
V ++ R + +VR+A A
Sbjct: 596 --VEMRRDARYSSDPTFVSPRMILGIVRMATA 625
>Z50874-6|CAA90765.1| 759|Caenorhabditis elegans Hypothetical protein
R10E4.4 protein.
Length = 759
Score = 157 bits (381), Expect = 6e-39
Identities = 98/242 (40%), Positives = 142/242 (58%), Gaps = 33/242 (13%)
Frame = +1
Query: 4 RGSSAAGLTAAVVKDEESFDFVIEAGALMLADNGVCCIDEFDKMDPTDQVAIHEAMEQQT 183
+GSSAAGLTA+V++D +S F++E GA++LAD GV CIDEFDKM D+VAIHEAMEQQT
Sbjct: 406 KGSSAAGLTASVIRDPQSRSFIMEGGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQT 465
Query: 184 ISLAKAGVRATLNARTSILAAANPIGGRYDRAKSLQQNVALSAPIMSRFDLFFILIDESS 363
IS+AKAG+ TLN+R S+LAAAN + GR+D ++ N+ I+SRFD+ +I+ D
Sbjct: 466 ISIAKAGITTTLNSRCSVLAAANSVYGRWDESRG-DDNIDFMPTILSRFDMIYIVKDTHD 524
Query: 364 EMVDYAIARKIVDLHCN----KEETY--------------------DCVYSREDLLRYIA 471
+ D +A+ ++++H N KE D + E L +++
Sbjct: 525 VLKDATLAKHVIEVHVNASAAKERDIAGVPKTATTDSDGVMTMFDTDGFLTIEFLKKFVT 584
Query: 472 FAR-SFKPIITEEAGKLLVEYYT-----VVXXXXXXX---XXXXXXXITVRQLESMVRLA 624
+AR + P +T +A + LV +Y VV ITVRQLE++VR+A
Sbjct: 585 YARLNCGPRLTPQASEKLVNHYVKMRNPVVNADAFKSGKKAHNSAIPITVRQLEAIVRIA 644
Query: 625 EA 630
E+
Sbjct: 645 ES 646
>Z81039-5|CAB02770.1| 812|Caenorhabditis elegans Hypothetical
protein C25D7.6 protein.
Length = 812
Score = 150 bits (364), Expect = 7e-37
Identities = 71/135 (52%), Positives = 95/135 (70%)
Frame = +1
Query: 4 RGSSAAGLTAAVVKDEESFDFVIEAGALMLADNGVCCIDEFDKMDPTDQVAIHEAMEQQT 183
RGSS GLTAAV D +S + +EAGA++LAD GV CIDEFDKM D+ AIHE MEQ
Sbjct: 374 RGSSGVGLTAAVTTDPDSGERRLEAGAMVLADRGVVCIDEFDKMSDIDRTAIHEVMEQGR 433
Query: 184 ISLAKAGVRATLNARTSILAAANPIGGRYDRAKSLQQNVALSAPIMSRFDLFFILIDESS 363
++++KAG+ A LNAR S+LAAANP+ GRY+ KS +N+ + ++SRFDL F+L+DE
Sbjct: 434 VTISKAGIHAKLNARCSVLAAANPVYGRYNPFKSPMENIGMQDSLLSRFDLIFVLLDEHD 493
Query: 364 EMVDYAIARKIVDLH 408
D +A ++ LH
Sbjct: 494 ADKDANVAEHVLKLH 508
Score = 36.7 bits (81), Expect = 0.014
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +1
Query: 436 VYSREDLLRYIAFARSFKPIITEEAGKLLVEYYTVVXXXXXXXXXXXXXX-ITVRQLESM 612
+ + + + +YI ARS +P +T+EA + + E Y + +T RQLE++
Sbjct: 559 ILTMDFMRKYIHLARSVQPKLTDEATEYISEVYADIRSFDITKTDQERTMPVTARQLETL 618
Query: 613 VRLAEA 630
+RL+ A
Sbjct: 619 IRLSTA 624
>AL023828-7|CAA19452.1| 881|Caenorhabditis elegans Hypothetical
protein Y17G7B.5a protein.
Length = 881
Score = 146 bits (355), Expect = 9e-36
Identities = 89/230 (38%), Positives = 135/230 (58%), Gaps = 21/230 (9%)
Frame = +1
Query: 4 RGSSAAGLTAAVVKDEESFDFVIEAGALMLADNGVCCIDEFDKMDPTDQVAIHEAMEQQT 183
+G+SA GLTA V + + ++ +EAGA++LAD GVC IDEFDKM D+ +IHEAMEQQ+
Sbjct: 524 QGASAVGLTAYVQRHPVTREWTLEAGAMVLADKGVCLIDEFDKMSDQDRTSIHEAMEQQS 583
Query: 184 ISLAKAGVRATLNARTSILAAANPIGGRYDRAKSLQQNVALSAPIMSRFDLFFILIDESS 363
IS++KAG+ +L+AR +++AA+NPIGGRY+ ++ +NV L+ PI+SRFD+ ++ D
Sbjct: 584 ISISKAGIVTSLHARCTVIAASNPIGGRYNPTRTFAENVDLTEPILSRFDVLCVIRDSVD 643
Query: 364 EMVDYAIARKIVDLHC------------NKEETYDCVYSR-------EDLLR-YIAFAR- 480
+ D +A+ +V H E D + R +DLLR YI +AR
Sbjct: 644 SVEDERLAKFVVGNHRTHHPDAKKIVKEGDELEEDQMDERTGVRLIPQDLLRKYIIYARE 703
Query: 481 SFKPIITEEAGKLLVEYYTVVXXXXXXXXXXXXXXITVRQLESMVRLAEA 630
P + E+ + ++ + ITVR +ESM+RL+EA
Sbjct: 704 KCHPTLPEQHSE---KFSNIFAQMRKESMATGSVAITVRHVESMIRLSEA 750
>Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical protein
F18C12.1 protein.
Length = 4171
Score = 32.7 bits (71), Expect = 0.22
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 12/110 (10%)
Frame = +1
Query: 112 CIDEFDKMDPTDQVA-------IHEAMEQQTISLAKAGVRATLNARTSILAAANPIGGRY 270
C DEF+++D T A I A++ + S G +N ++I NP G Y
Sbjct: 1687 CFDEFNRLDSTVLSAVSMQIQTIQGAIKSRAGSCTFGGKNVQVNPNSAIFVTLNPAGKGY 1746
Query: 271 DRAKSLQQNV--ALSAPIMSRFD--LFFILIDESSEMVD-YAIARKIVDL 405
+ + N+ A +M + D L I S VD A+ARKIV +
Sbjct: 1747 GGRQKMPDNLKQLFRAVVMGKPDNELISSTILYSEGFVDATALARKIVSV 1796
>Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical
protein F33A8.1 protein.
Length = 897
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +3
Query: 255 DRGQIRQGEVPAAERRPQRPHHVTFRLILHTDRREQRDGRLRYSEEDRRS 404
D G+ R+G+ +R + H R DR ++RD R S++DR++
Sbjct: 824 DSGERRRGDRDRRDRNKDQEDHREDRRDRSKDREDRRDRRRHDSDDDRKT 873
>U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin
protein.
Length = 897
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +3
Query: 255 DRGQIRQGEVPAAERRPQRPHHVTFRLILHTDRREQRDGRLRYSEEDRRS 404
D G+ R+G+ +R + H R DR ++RD R S++DR++
Sbjct: 824 DSGERRRGDRDRRDRNKDQEDHREDRRDRSKDREDRRDRRRHDSDDDRKT 873
>Z83220-2|CAB05701.2| 905|Caenorhabditis elegans Hypothetical
protein C34B7.2 protein.
Length = 905
Score = 29.1 bits (62), Expect = 2.7
Identities = 24/87 (27%), Positives = 37/87 (42%)
Frame = -3
Query: 344 MKNKSKRDMMGALRATFCCRDFALSYLPPIGFAAARIEVLAFNVALTPAFANDMVCCSMA 165
+K KR G L F + YL ++ ++F+VA AN M ++
Sbjct: 349 IKRNEKRRHEGVLHTQFLKN---IEYLNQFLPNEEKLCYISFDVARCNKAANSMPSINVL 405
Query: 164 SCMATWSVGSILSNSSIQHTPLSANIR 84
+ M S+ SIL N Q PLS ++
Sbjct: 406 NVMEDLSMKSILKNGWFQSFPLSEALK 432
>AF026213-9|AAB71302.2| 615|Caenorhabditis elegans Protein kinase
protein 9, isoform b protein.
Length = 615
Score = 29.1 bits (62), Expect = 2.7
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 143 PTKSPYTKPWNNRPYR 190
P +S Y PWNN+PY+
Sbjct: 114 PPRSQYQAPWNNQPYQ 129
>U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore
complex protein protein11 protein.
Length = 805
Score = 28.3 bits (60), Expect = 4.8
Identities = 21/69 (30%), Positives = 31/69 (44%)
Frame = -3
Query: 221 FNVALTPAFANDMVCCSMASCMATWSVGSILSNSSIQHTPLSANIRAPASITKSKDSSSL 42
F + PA A + A+ +T SVG + NSS T +A APA+ + +
Sbjct: 298 FGASTAPAAATGGLFSIGAASASTPSVG-LFGNSSASTTAAAAPATAPAAASTGGLFGAT 356
Query: 41 TTAAVRPAA 15
T AA P +
Sbjct: 357 TAAAAAPTS 365
>Z70205-11|CAD44096.1| 409|Caenorhabditis elegans Hypothetical
protein E02H4.3b protein.
Length = 409
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 282 VPAAERRPQRPHHVTFRLILHTDRREQRDGRLRYSEED 395
+PA++ RP+ P V+ + T ++ +DG L YS+ D
Sbjct: 33 IPASQARPKVPEIVSSQ---RTQHQDDKDGHLIYSKGD 67
>Z68003-6|CAD44105.1| 409|Caenorhabditis elegans Hypothetical
protein E02H4.3b protein.
Length = 409
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 282 VPAAERRPQRPHHVTFRLILHTDRREQRDGRLRYSEED 395
+PA++ RP+ P V+ + T ++ +DG L YS+ D
Sbjct: 33 IPASQARPKVPEIVSSQ---RTQHQDDKDGHLIYSKGD 67
>Z49938-2|CAA90187.1| 306|Caenorhabditis elegans Hypothetical
protein F38A3.1 protein.
Length = 306
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 450 RSVTLYRVREVIQTYYYGGSR*VVSRVLHSGPRSRRVGLR 569
RS++L+ EV++ + S+ VV R H G RRV R
Sbjct: 61 RSLSLHNQYEVVEEFTGVPSKFVVKREAHRGMSKRRVARR 100
>U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical protein
T05A12.4a protein.
Length = 1622
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 149 WSVGSILSNSSIQHTPLSANIRA 81
W++G I S I + P+ ANIRA
Sbjct: 1574 WTIGDIRSMFGINYYPVQANIRA 1596
>AL034543-2|CAA22515.1| 1696|Caenorhabditis elegans Hypothetical
protein Y81G3A.3 protein.
Length = 1696
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/43 (25%), Positives = 23/43 (53%)
Frame = +1
Query: 343 ILIDESSEMVDYAIARKIVDLHCNKEETYDCVYSREDLLRYIA 471
I + ++ +A+KI N ++TY+ + + +LLR +A
Sbjct: 281 ISVSPDQILIQLNVAQKIFSSEENMQDTYELIVQKSNLLRLLA 323
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,353,670
Number of Sequences: 27780
Number of extensions: 305704
Number of successful extensions: 1126
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1108
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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