Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_I22
         (631 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    23   2.4  
AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    23   2.4  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    22   5.7  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    22   5.7  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    22   5.7  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   5.7  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   7.5  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   9.9  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   9.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   9.9  

>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +3

Query: 279 EVPAAERRPQRPHHVTFRLILHTDRR 356
           E P   +R  R HH+   + LHT  +
Sbjct: 11  ECPECHKRFTRDHHLKTHMRLHTGEK 36


>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
           finger domain-Z2 isoform protein.
          Length = 71

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 379 AIARKIVDLHCNKEETYDCV 438
           ++ R + D H  ++E Y CV
Sbjct: 20  SLKRHVADKHAERQEEYRCV 39


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 587 IRHEPPAEPDPSRP 546
           +R EP AEP  +RP
Sbjct: 116 LRREPEAEPGNNRP 129



 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 587 IRHEPPAEPDPSRP 546
           +R EP AEP  +RP
Sbjct: 142 LRREPEAEPGNNRP 155


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +2

Query: 401 ICIVTKRRLTIVYILEKICYVISRSRGHSNLLL 499
           IC++T  R       E  C + S S  H N +L
Sbjct: 523 ICLLTNARRVASVRAETYCNLFSLSVDHFNAVL 555


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +2

Query: 401 ICIVTKRRLTIVYILEKICYVISRSRGHSNLLL 499
           IC++T  R       E  C + S S  H N +L
Sbjct: 491 ICLLTNARRVASVRAETYCNLFSLSVDHFNAVL 523


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 306 EGDVLLQGLRPVVSAPDRIRSG 241
           EGD++L GL  V    DR+  G
Sbjct: 114 EGDLVLGGLMMVHERQDRLTCG 135


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +1

Query: 349  IDESSEMVDYAIARKIVDLHCNKEETYDCVYSREDLL 459
            ++E  +  D  +   I+D H    +  D  +S ED+L
Sbjct: 1388 LNEYLDKADVIVNTPIMDAHFKDVKLSDFGFSTEDIL 1424


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 445 REDLLRYIAFARSFK 489
           +EDL+ Y  + RSFK
Sbjct: 27  KEDLIVYQVYPRSFK 41


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 445 REDLLRYIAFARSFK 489
           +EDL+ Y  + RSFK
Sbjct: 27  KEDLIVYQVYPRSFK 41


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -3

Query: 110 HTPLSANIRAPASITKSKDSSSLTTAAVRPAA 15
           H P S+    PA+IT +  +++ TTA     A
Sbjct: 95  HPPASST-SLPATITTTTTTTTTTTATAAATA 125


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,050
Number of Sequences: 438
Number of extensions: 3929
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)