Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_I19
(509 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation... 304 3e-83
AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determini... 304 3e-83
Z81462-7|CAB03845.1| 1008|Caenorhabditis elegans Hypothetical pr... 236 6e-63
Z81457-12|CAB03819.1| 1008|Caenorhabditis elegans Hypothetical p... 236 6e-63
AF286900-1|AAG01333.1| 1008|Caenorhabditis elegans sex determini... 236 6e-63
Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical pr... 200 5e-52
AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex determina... 200 5e-52
U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical pr... 193 7e-50
U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical pr... 193 7e-50
AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical ... 151 3e-37
U97014-3|AAB52427.3| 856|Caenorhabditis elegans Hypothetical pr... 138 2e-33
L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical pr... 103 6e-23
AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical ... 100 1e-21
Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical pr... 68 5e-12
Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical pr... 65 2e-11
AC084159-1|AAK39368.1| 223|Caenorhabditis elegans Hypothetical ... 51 4e-07
AC006708-24|AAF60413.1| 660|Caenorhabditis elegans Hypothetical... 31 0.37
AF077545-1|AAC26306.2| 506|Caenorhabditis elegans Hypothetical ... 30 0.85
Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z78543-3|CAB01755.2| 772|Caenorhabditis elegans Hypothetical pr... 27 6.0
U00037-5|AAA50659.1| 235|Caenorhabditis elegans Hypothetical pr... 27 6.0
>U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation of
germline protein5 protein.
Length = 1200
Score = 304 bits (746), Expect = 3e-83
Identities = 140/166 (84%), Positives = 156/166 (93%)
Frame = +2
Query: 11 FEDCTSPETIIKYMTDGMLLRECLMDLDLKSYSVIMLDEAHERTIHTDVLFGLLKQAVQK 190
FEDCTS +TIIKYMTDGMLLRECL+D DL YS+IMLDEAHERTIHTDVLFGLLK A +K
Sbjct: 623 FEDCTSQDTIIKYMTDGMLLRECLIDPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARK 682
Query: 191 RPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQI 370
RPELKLI+TSATLD+VKFS+YF EAPIFTIPGRTFPVE+LYT+EPE+DYL+A+ ITVMQI
Sbjct: 683 RPELKLIITSATLDSVKFSEYFLEAPIFTIPGRTFPVEILYTREPESDYLEAAHITVMQI 742
Query: 371 HLREPPGDVLLFLTGQEEIDTACEILYERMKSLGQDVPELIILPVY 508
HL EPPGDVL+FLTGQEEIDT+CE+LYERMKS+G DVPELIILPVY
Sbjct: 743 HLTEPPGDVLVFLTGQEEIDTSCEVLYERMKSMGPDVPELIILPVY 788
>AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determining
protein MOG-5 protein.
Length = 1200
Score = 304 bits (746), Expect = 3e-83
Identities = 140/166 (84%), Positives = 156/166 (93%)
Frame = +2
Query: 11 FEDCTSPETIIKYMTDGMLLRECLMDLDLKSYSVIMLDEAHERTIHTDVLFGLLKQAVQK 190
FEDCTS +TIIKYMTDGMLLRECL+D DL YS+IMLDEAHERTIHTDVLFGLLK A +K
Sbjct: 623 FEDCTSQDTIIKYMTDGMLLRECLIDPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARK 682
Query: 191 RPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQI 370
RPELKLI+TSATLD+VKFS+YF EAPIFTIPGRTFPVE+LYT+EPE+DYL+A+ ITVMQI
Sbjct: 683 RPELKLIITSATLDSVKFSEYFLEAPIFTIPGRTFPVEILYTREPESDYLEAAHITVMQI 742
Query: 371 HLREPPGDVLLFLTGQEEIDTACEILYERMKSLGQDVPELIILPVY 508
HL EPPGDVL+FLTGQEEIDT+CE+LYERMKS+G DVPELIILPVY
Sbjct: 743 HLTEPPGDVLVFLTGQEEIDTSCEVLYERMKSMGPDVPELIILPVY 788
>Z81462-7|CAB03845.1| 1008|Caenorhabditis elegans Hypothetical
protein C04H5.6 protein.
Length = 1008
Score = 236 bits (578), Expect = 6e-63
Identities = 108/167 (64%), Positives = 138/167 (82%), Gaps = 1/167 (0%)
Frame = +2
Query: 11 FEDCTSPETIIKYMTDGMLLRECLMDLDLKSYSVIMLDEAHERTIHTDVLFGLLKQAVQK 190
FEDCTS +T++KYMTDGMLLRE L + DL SYSV+M+DEAHERT+HTD+LFGL+K +
Sbjct: 448 FEDCTSEKTVLKYMTDGMLLREFLNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARF 507
Query: 191 RPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQI 370
R +LKL+++SATLDA KFS +F +APIF IPGR FPV++ YT+ PE DY+DA+++T+MQI
Sbjct: 508 RKDLKLLISSATLDAEKFSSFFDDAPIFRIPGRRFPVDIYYTQAPEADYVDAAIVTIMQI 567
Query: 371 HLREP-PGDVLLFLTGQEEIDTACEILYERMKSLGQDVPELIILPVY 508
HL +P PGD+L+FLTGQEEI+T E L ER K+LG + ELI LPVY
Sbjct: 568 HLTQPLPGDILVFLTGQEEIETVQEALMERSKALGSKIKELIPLPVY 614
>Z81457-12|CAB03819.1| 1008|Caenorhabditis elegans Hypothetical
protein C04H5.6 protein.
Length = 1008
Score = 236 bits (578), Expect = 6e-63
Identities = 108/167 (64%), Positives = 138/167 (82%), Gaps = 1/167 (0%)
Frame = +2
Query: 11 FEDCTSPETIIKYMTDGMLLRECLMDLDLKSYSVIMLDEAHERTIHTDVLFGLLKQAVQK 190
FEDCTS +T++KYMTDGMLLRE L + DL SYSV+M+DEAHERT+HTD+LFGL+K +
Sbjct: 448 FEDCTSEKTVLKYMTDGMLLREFLNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARF 507
Query: 191 RPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQI 370
R +LKL+++SATLDA KFS +F +APIF IPGR FPV++ YT+ PE DY+DA+++T+MQI
Sbjct: 508 RKDLKLLISSATLDAEKFSSFFDDAPIFRIPGRRFPVDIYYTQAPEADYVDAAIVTIMQI 567
Query: 371 HLREP-PGDVLLFLTGQEEIDTACEILYERMKSLGQDVPELIILPVY 508
HL +P PGD+L+FLTGQEEI+T E L ER K+LG + ELI LPVY
Sbjct: 568 HLTQPLPGDILVFLTGQEEIETVQEALMERSKALGSKIKELIPLPVY 614
>AF286900-1|AAG01333.1| 1008|Caenorhabditis elegans sex determining
protein MOG-4 protein.
Length = 1008
Score = 236 bits (578), Expect = 6e-63
Identities = 108/167 (64%), Positives = 138/167 (82%), Gaps = 1/167 (0%)
Frame = +2
Query: 11 FEDCTSPETIIKYMTDGMLLRECLMDLDLKSYSVIMLDEAHERTIHTDVLFGLLKQAVQK 190
FEDCTS +T++KYMTDGMLLRE L + DL SYSV+M+DEAHERT+HTD+LFGL+K +
Sbjct: 448 FEDCTSEKTVLKYMTDGMLLREFLNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARF 507
Query: 191 RPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQI 370
R +LKL+++SATLDA KFS +F +APIF IPGR FPV++ YT+ PE DY+DA+++T+MQI
Sbjct: 508 RKDLKLLISSATLDAEKFSSFFDDAPIFRIPGRRFPVDIYYTQAPEADYVDAAIVTIMQI 567
Query: 371 HLREP-PGDVLLFLTGQEEIDTACEILYERMKSLGQDVPELIILPVY 508
HL +P PGD+L+FLTGQEEI+T E L ER K+LG + ELI LPVY
Sbjct: 568 HLTQPLPGDILVFLTGQEEIETVQEALMERSKALGSKIKELIPLPVY 614
>Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical protein
K03H1.2 protein.
Length = 1131
Score = 200 bits (488), Expect = 5e-52
Identities = 93/167 (55%), Positives = 126/167 (75%), Gaps = 1/167 (0%)
Frame = +2
Query: 11 FEDCTSPETIIKYMTDGMLLRECLMDLDLKSYSVIMLDEAHERTIHTDVLFGLLKQAVQK 190
FEDCTS +TIIKYMTDG+LLRECL D L YS I++DEAHER+++TDVLFGLL++ + K
Sbjct: 524 FEDCTSEKTIIKYMTDGILLRECLGDGSLDQYSAIIMDEAHERSLNTDVLFGLLREVIAK 583
Query: 191 RPELKLIVTSATLDAVKFSQYF-FEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQ 367
R +LKLIVTSAT+DA KF+ +F P FTIPGRTFPVE+ + + P DY+DA++ +
Sbjct: 584 RADLKLIVTSATMDADKFADFFGGNCPTFTIPGRTFPVELFHARTPVEDYVDAAVKQAVT 643
Query: 368 IHLREPPGDVLLFLTGQEEIDTACEILYERMKSLGQDVPELIILPVY 508
IHL GD+L+F+ GQE+I+ CE++ E++ L + P L +LP+Y
Sbjct: 644 IHLGGMDGDILIFMPGQEDIECTCEMIKEKLGEL-DEAPPLAVLPIY 689
>AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex determination
protein MOG-1 protein.
Length = 1131
Score = 200 bits (488), Expect = 5e-52
Identities = 93/167 (55%), Positives = 126/167 (75%), Gaps = 1/167 (0%)
Frame = +2
Query: 11 FEDCTSPETIIKYMTDGMLLRECLMDLDLKSYSVIMLDEAHERTIHTDVLFGLLKQAVQK 190
FEDCTS +TIIKYMTDG+LLRECL D L YS I++DEAHER+++TDVLFGLL++ + K
Sbjct: 524 FEDCTSEKTIIKYMTDGILLRECLGDGSLDQYSAIIMDEAHERSLNTDVLFGLLREVIAK 583
Query: 191 RPELKLIVTSATLDAVKFSQYF-FEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQ 367
R +LKLIVTSAT+DA KF+ +F P FTIPGRTFPVE+ + + P DY+DA++ +
Sbjct: 584 RADLKLIVTSATMDADKFADFFGGNCPTFTIPGRTFPVELFHARTPVEDYVDAAVKQAVT 643
Query: 368 IHLREPPGDVLLFLTGQEEIDTACEILYERMKSLGQDVPELIILPVY 508
IHL GD+L+F+ GQE+I+ CE++ E++ L + P L +LP+Y
Sbjct: 644 IHLGGMDGDILIFMPGQEDIECTCEMIKEKLGEL-DEAPPLAVLPIY 689
>U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical
protein F56D2.6b protein.
Length = 700
Score = 193 bits (470), Expect = 7e-50
Identities = 87/167 (52%), Positives = 123/167 (73%), Gaps = 1/167 (0%)
Frame = +2
Query: 11 FEDCTSPETIIKYMTDGMLLRECLMDLDLKSYSVIMLDEAHERTIHTDVLFGLLKQAVQK 190
FEDC S T++KY TDGMLLRE + L Y V++LDEAHERT+ TD+L GL+K+ V+
Sbjct: 167 FEDCISERTVLKYCTDGMLLREAMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRN 226
Query: 191 RPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQI 370
R ++K+++ SATLDA KF +YF + P+ ++PGRTFPVE+ +T E DYL+A++ TV+QI
Sbjct: 227 RADIKVVIMSATLDAGKFQRYFEDCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQI 286
Query: 371 HL-REPPGDVLLFLTGQEEIDTACEILYERMKSLGQDVPELIILPVY 508
H+ E GD+LLFLTGQEEI+ AC+ + +++LG D L +P+Y
Sbjct: 287 HMVEEVEGDILLFLTGQEEIEEACKRIDREIQALGADAGALSCIPLY 333
>U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical
protein F56D2.6a protein.
Length = 739
Score = 193 bits (470), Expect = 7e-50
Identities = 87/167 (52%), Positives = 123/167 (73%), Gaps = 1/167 (0%)
Frame = +2
Query: 11 FEDCTSPETIIKYMTDGMLLRECLMDLDLKSYSVIMLDEAHERTIHTDVLFGLLKQAVQK 190
FEDC S T++KY TDGMLLRE + L Y V++LDEAHERT+ TD+L GL+K+ V+
Sbjct: 167 FEDCISERTVLKYCTDGMLLREAMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRN 226
Query: 191 RPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQI 370
R ++K+++ SATLDA KF +YF + P+ ++PGRTFPVE+ +T E DYL+A++ TV+QI
Sbjct: 227 RADIKVVIMSATLDAGKFQRYFEDCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQI 286
Query: 371 HL-REPPGDVLLFLTGQEEIDTACEILYERMKSLGQDVPELIILPVY 508
H+ E GD+LLFLTGQEEI+ AC+ + +++LG D L +P+Y
Sbjct: 287 HMVEEVEGDILLFLTGQEEIEEACKRIDREIQALGADAGALSCIPLY 333
>AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical
protein Y67D2.6 protein.
Length = 732
Score = 151 bits (366), Expect = 3e-37
Identities = 79/176 (44%), Positives = 115/176 (65%), Gaps = 10/176 (5%)
Frame = +2
Query: 11 FEDCTSPETIIKYMTDGMLLRECLMDLDLKSYSVIMLDEAHERTIHTDVLFGLLKQAVQK 190
F+D + +T +K+MTDG+LLRE L D L YS+IM+DEAHER+ +TD+L GLL++ +Q
Sbjct: 161 FDDVSDKDTKVKFMTDGLLLREILADPLLSKYSIIMIDEAHERSCNTDILLGLLRKIIQI 220
Query: 191 RPELKLIVTSATLDAVKFSQYF----------FEAPIFTIPGRTFPVEVLYTKEPETDYL 340
R +L++IV+SATLDA F +F A I ++ GRT PV V +TK DY
Sbjct: 221 RNDLRIIVSSATLDAELFKDFFEMNETGNSDKDTAGIISVEGRTHPVAVHHTKTSVPDYC 280
Query: 341 DASLITVMQIHLREPPGDVLLFLTGQEEIDTACEILYERMKSLGQDVPELIILPVY 508
+++ TV+ IH E PGD+L+FLTGQ+E++ CE L E +L ++ L ++P Y
Sbjct: 281 QSAVDTVINIHKHENPGDILVFLTGQDEVEDVCEKLRELAGNL-KNCDRLWVVPCY 335
>U97014-3|AAB52427.3| 856|Caenorhabditis elegans Hypothetical
protein T05E8.3 protein.
Length = 856
Score = 138 bits (335), Expect = 2e-33
Identities = 77/180 (42%), Positives = 109/180 (60%), Gaps = 11/180 (6%)
Frame = +2
Query: 2 HEGFEDCTSPETIIKYMTDGMLLRECLMDLDLKSYSVIMLDEAHERTIHTDVLFGLLKQA 181
H FE+ T +T I+YMTDG++LR+ L+ L YS +++DEAHER++H+DVL +L+Q
Sbjct: 241 HVRFENATCHKTKIEYMTDGIVLRKALVSPLLDKYSCVIIDEAHERSLHSDVLMCILRQC 300
Query: 182 VQKRPE----LKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEVLYTKE------PET 331
+R E L+LI+ SATL A KF YF A + + GRTFP+EV + T
Sbjct: 301 QDQRRETNNPLRLIIMSATLQAEKFQSYFNNAKVVLVAGRTFPIEVFHVNPKINKSFSST 360
Query: 332 DYLDASLITVMQIHLREPPG-DVLLFLTGQEEIDTACEILYERMKSLGQDVPELIILPVY 508
DY+ ++I V +HL EP G D+L+FLTG EEI+ L E SL L+ +P+Y
Sbjct: 361 DYVYNAVICVKYVHLTEPKGRDILVFLTGSEEIEAVASQLAELNGSLPASADVLMPVPLY 420
>L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical
protein C06E1.10 protein.
Length = 1148
Score = 103 bits (248), Expect = 6e-23
Identities = 56/147 (38%), Positives = 86/147 (58%), Gaps = 8/147 (5%)
Frame = +2
Query: 11 FEDCTSPETIIKYMTDGMLLRECLMDLDLKSYSVIMLDEAHERTIHTDVLFGLLKQAVQK 190
+E S T I +MTDG+L++E D+ LK YSVI++DEAHER++++DVL G+L + V
Sbjct: 318 YEGTRSETTNILFMTDGVLMKEMEQDVMLKKYSVILIDEAHERSMYSDVLIGMLSRIVPL 377
Query: 191 RPE----LKLIVTSATLDAVKFSQY----FFEAPIFTIPGRTFPVEVLYTKEPETDYLDA 346
R + L+L++ SATL F+ + + R FPV V + K DY+ +
Sbjct: 378 RSKTARPLRLVIMSATLRLDDFTHKKLFPLLTPKVIKVDARQFPVSVHFEKRTPDDYIAS 437
Query: 347 SLITVMQIHLREPPGDVLLFLTGQEEI 427
+ +IH PPG +L+F+TGQ E+
Sbjct: 438 AFRKTCRIHETLPPGAILVFVTGQHEV 464
>AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical
protein Y37E11AM.1 protein.
Length = 1037
Score = 99.5 bits (237), Expect = 1e-21
Identities = 58/159 (36%), Positives = 92/159 (57%), Gaps = 13/159 (8%)
Frame = +2
Query: 11 FEDCTSPETIIKYMTDGMLLRECLMDLDLKSYSVIMLDEAHERTIHTDVLFGLLKQAVQK 190
FE S +T + ++T+G+LLR+ D L+ Y+VI+LDE HER + +D+L GLL+ K
Sbjct: 172 FETTKSQKTKLLFLTEGLLLRQMEKDSLLEKYNVIILDEVHERHLTSDLLIGLLRDLCTK 231
Query: 191 RPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEVLY--------TKEPETDYLDA 346
R +LKLI+ SAT++ F YF AP+ +PGR FP++V + + +T +D
Sbjct: 232 RDDLKLILMSATINLDLFKGYFEGAPVVQVPGRLFPIDVRWHPIKQFIDQSDKKTHKIDP 291
Query: 347 S-LITVMQIHLREPP----GDVLLFLTGQEEIDTACEIL 448
+ ++++ ++ P GD L+FL G EI E L
Sbjct: 292 EPYLKILELIDKQFPSTQRGDALIFLNGVAEISMVAEHL 330
>Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical
protein F52B5.3 protein.
Length = 1425
Score = 67.7 bits (158), Expect = 5e-12
Identities = 38/100 (38%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Frame = +2
Query: 26 SPETIIKYMTDGMLLRECLMDLDLKSYSVIMLDEAHERTIHTDVLFGLLKQAVQKRPELK 205
S +T++ Y T G+LLR D + I++DE HER I+TD L L++ ++ RP+LK
Sbjct: 271 SDDTVLTYCTTGVLLRMLTSDPVASGITHIVMDEIHEREINTDYLLIALRECLKMRPDLK 330
Query: 206 LIVTSATLDA--VKFSQYF--FEAPIFTIPGRTFPVEVLY 313
+I+ SAT++ FS YF + I R F V+V Y
Sbjct: 331 VILMSATIEGNMQLFSNYFENHSMDVIRIESRAFDVKVFY 370
>Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical
protein T07D4.3 protein.
Length = 1301
Score = 65.3 bits (152), Expect = 2e-11
Identities = 36/111 (32%), Positives = 64/111 (57%), Gaps = 7/111 (6%)
Frame = +2
Query: 11 FEDCTS-PETIIKYMTDGMLLRECLMDLDLKSYSVIMLDEAHERTIHTDVLFGLLKQAVQ 187
F+ T P I + T G+LLR +M+ L+ S +++DE HER + TD + +L++ +
Sbjct: 468 FDSATPRPYGSIMFCTVGVLLR--MMENGLRGISHVIIDEIHERDVDTDFVLIVLREMIS 525
Query: 188 KRPELKLIVTSATLDAVKFSQYFFE------APIFTIPGRTFPVEVLYTKE 322
+L++++ SAT+D F+ +F P+ T+ GRTFPV+ Y ++
Sbjct: 526 TYRDLRVVLMSATIDTDLFTNFFSSIPDVGPTPVITMHGRTFPVQSFYLED 576
>AC084159-1|AAK39368.1| 223|Caenorhabditis elegans Hypothetical
protein Y73B3A.21 protein.
Length = 223
Score = 51.2 bits (117), Expect = 4e-07
Identities = 21/41 (51%), Positives = 30/41 (73%)
Frame = +2
Query: 332 DYLDASLITVMQIHLREPPGDVLLFLTGQEEIDTACEILYE 454
DY +++ TV+ IH E PGD+L+FLTGQ+E++ CE L E
Sbjct: 148 DYCQSAVNTVINIHKHENPGDILVFLTGQDEVEDVCEKLRE 188
>AC006708-24|AAF60413.1| 660|Caenorhabditis elegans Hypothetical
protein Y110A7A.19 protein.
Length = 660
Score = 31.5 bits (68), Expect = 0.37
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +2
Query: 380 EPPGDVLLFLTGQEEIDTACEILYERMKSLGQDVPELIILPVY 508
EP + LL + E+ +C ILYERM+S DV E + L ++
Sbjct: 117 EPTENNLLKMISSREVKDSC-ILYERMRSENVDVSEKVQLELF 158
>AF077545-1|AAC26306.2| 506|Caenorhabditis elegans Hypothetical
protein H41C03.3 protein.
Length = 506
Score = 30.3 bits (65), Expect = 0.85
Identities = 13/64 (20%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 302 EVLYTKEPETDYLDAS-LITVMQIHLREPPGDVLLFLTGQEEIDTACEILYERMKSLGQD 478
+ +Y + PETD++D ++ +++L+ G + + + ++ +C + R+ G D
Sbjct: 95 KAIYPRRPETDHIDCGRILADDKVYLQTVSGKDRVKIVENKNLNMSCSAIMNRILPSGND 154
Query: 479 VPEL 490
+ L
Sbjct: 155 LKPL 158
>Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 27.9 bits (59), Expect = 4.5
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +3
Query: 12 SRTAPAPRPLSST*QTVCCSANV*WTST*SHTP**CWTKPTSEPSTLT 155
+ T PAP+ ++T TV + + T+T TP T T+ P+T T
Sbjct: 302 AETVPAPKTTTTTTTTVPSTTTITTTTTQRTTPYTTTTTTTAAPTTTT 349
>Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 27.9 bits (59), Expect = 4.5
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +3
Query: 12 SRTAPAPRPLSST*QTVCCSANV*WTST*SHTP**CWTKPTSEPSTLT 155
+ T PAP+ ++T TV + + T+T TP T T+ P+T T
Sbjct: 302 AETVPAPKTTTTTTTTVPSTTTITTTTTQRTTPYTTTTTTTAAPTTTT 349
>Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical
protein F29G6.3c protein.
Length = 1453
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -1
Query: 473 APRISFSRTGSHRRCRSPPGQSGTGAHHRAVPSD 372
AP ++ SR+GSH S +HH A+ D
Sbjct: 135 APSVASSRSGSHHSVASHHSHHSQHSHHSALTHD 168
>Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical
protein F29G6.3b protein.
Length = 1785
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -1
Query: 473 APRISFSRTGSHRRCRSPPGQSGTGAHHRAVPSD 372
AP ++ SR+GSH S +HH A+ D
Sbjct: 135 APSVASSRSGSHHSVASHHSHHSQHSHHSALTHD 168
>Z78543-3|CAB01755.2| 772|Caenorhabditis elegans Hypothetical
protein F29G6.3a protein.
Length = 772
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -1
Query: 473 APRISFSRTGSHRRCRSPPGQSGTGAHHRAVPSD 372
AP ++ SR+GSH S +HH A+ D
Sbjct: 135 APSVASSRSGSHHSVASHHSHHSQHSHHSALTHD 168
>U00037-5|AAA50659.1| 235|Caenorhabditis elegans Hypothetical
protein T20H4.2 protein.
Length = 235
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 450 YRISQAVSISSWPVRNRSTSPGGSLRC 370
+R S + S W R R T+P G+ RC
Sbjct: 109 HRNSDSRSHERWSTRRRQTTPEGNFRC 135
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,781,637
Number of Sequences: 27780
Number of extensions: 283146
Number of successful extensions: 925
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 912
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -