Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_I16
(535 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X64364-1|CAA45716.1| 269|Homo sapiens M6 antigen protein. 59 8e-09
M87879-1|AAA91084.1| 269|Homo sapiens 5F7 protein. 59 8e-09
L20471-1|AAB41120.1| 269|Homo sapiens extracellular matrix meta... 59 8e-09
L10240-1|AAA68936.1| 269|Homo sapiens collagenase stimulatory f... 59 8e-09
D45131-1|BAA08109.1| 269|Homo sapiens basigin protein. 59 8e-09
BC009040-1|AAH09040.1| 269|Homo sapiens basigin (Ok blood group... 59 8e-09
AY942196-1|AAX20110.1| 385|Homo sapiens basigin (OK blood group... 59 8e-09
AY358113-1|AAQ88480.1| 385|Homo sapiens EMMPRIN protein. 59 8e-09
AF548371-1|AAN40694.1| 385|Homo sapiens basigin long isoform pr... 59 8e-09
AF042854-1|AAD10704.1| 269|Homo sapiens EMMPRIN protein. 59 8e-09
AC005559-1|AAC33279.1| 269|Homo sapiens basigin protein. 59 8e-09
AB091680-1|BAC67168.1| 269|Homo sapiens cervical EMMPRIN protein. 59 8e-09
BC117462-1|AAI17463.1| 282|Homo sapiens neuroplastin protein. 58 1e-08
BC105979-1|AAI05980.1| 282|Homo sapiens neuroplastin protein. 58 1e-08
AF109127-1|AAD43218.1| 282|Homo sapiens stromal cell-derived re... 58 1e-08
AF109126-1|AAD43217.1| 398|Homo sapiens stromal cell-derived re... 58 1e-08
AB072923-1|BAB88938.1| 269|Homo sapiens EMMPRIN protein. 57 3e-08
AB085790-1|BAC76828.1| 269|Homo sapiens CD147 protein. 57 5e-08
BC142689-1|AAI42690.1| 1024|Homo sapiens PSD protein protein. 30 5.9
BC142643-1|AAI42644.1| 1024|Homo sapiens PSD protein protein. 30 5.9
BC059398-1|AAH59398.1| 327|Homo sapiens embigin homolog (mouse)... 30 5.9
BC039259-1|AAH39259.2| 927|Homo sapiens PSD protein protein. 30 5.9
AL121928-3|CAI12516.1| 1024|Homo sapiens pleckstrin and Sec7 dom... 30 5.9
AB095931-1|BAC23107.1| 1091|Homo sapiens KIAA2011 protein protein. 30 5.9
BC103509-1|AAI03510.1| 958|Homo sapiens SLIT and NTRK-like fami... 29 7.8
BC098106-1|AAH98106.1| 958|Homo sapiens SLIT and NTRK-like fami... 29 7.8
AL603883-1|CAH73026.1| 958|Homo sapiens SLIT and NTRK-like fami... 29 7.8
AB020725-1|BAA74941.1| 966|Homo sapiens KIAA0918 protein protein. 29 7.8
>X64364-1|CAA45716.1| 269|Homo sapiens M6 antigen protein.
Length = 269
Score = 59.3 bits (137), Expect = 8e-09
Identities = 37/75 (49%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Frame = +2
Query: 98 DAGVYACVPAGGV-ADSAM--LRVKDKYAALWPFLGICAEVFVLCAIILVYEKRRTKPDN 268
D G Y C +D A+ LRV+ AALWPFLGI AEV VL II +YEKRR KP++
Sbjct: 179 DPGQYRCNGTSSKGSDQAIITLRVRSHLAALWPFLGIVAEVLVLVTIIFIYEKRR-KPED 237
Query: 269 --DDSDTENHDQKKS 307
DD D + K S
Sbjct: 238 VLDDDDAGSAPLKSS 252
>M87879-1|AAA91084.1| 269|Homo sapiens 5F7 protein.
Length = 269
Score = 59.3 bits (137), Expect = 8e-09
Identities = 37/75 (49%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Frame = +2
Query: 98 DAGVYACVPAGGV-ADSAM--LRVKDKYAALWPFLGICAEVFVLCAIILVYEKRRTKPDN 268
D G Y C +D A+ LRV+ AALWPFLGI AEV VL II +YEKRR KP++
Sbjct: 179 DPGQYRCNGTSSKGSDQAIITLRVRSHLAALWPFLGIVAEVLVLVTIIFIYEKRR-KPED 237
Query: 269 --DDSDTENHDQKKS 307
DD D + K S
Sbjct: 238 VLDDDDAGSAPLKSS 252
>L20471-1|AAB41120.1| 269|Homo sapiens extracellular matrix
metalloproteinase inducer protein.
Length = 269
Score = 59.3 bits (137), Expect = 8e-09
Identities = 37/75 (49%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Frame = +2
Query: 98 DAGVYACVPAGGV-ADSAM--LRVKDKYAALWPFLGICAEVFVLCAIILVYEKRRTKPDN 268
D G Y C +D A+ LRV+ AALWPFLGI AEV VL II +YEKRR KP++
Sbjct: 179 DPGQYRCNGTSSKGSDQAIITLRVRSHLAALWPFLGIVAEVLVLVTIIFIYEKRR-KPED 237
Query: 269 --DDSDTENHDQKKS 307
DD D + K S
Sbjct: 238 VLDDDDAGSAPLKSS 252
>L10240-1|AAA68936.1| 269|Homo sapiens collagenase stimulatory
factor protein.
Length = 269
Score = 59.3 bits (137), Expect = 8e-09
Identities = 37/75 (49%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Frame = +2
Query: 98 DAGVYACVPAGGV-ADSAM--LRVKDKYAALWPFLGICAEVFVLCAIILVYEKRRTKPDN 268
D G Y C +D A+ LRV+ AALWPFLGI AEV VL II +YEKRR KP++
Sbjct: 179 DPGQYRCNGTSSKGSDQAIITLRVRSHLAALWPFLGIVAEVLVLVTIIFIYEKRR-KPED 237
Query: 269 --DDSDTENHDQKKS 307
DD D + K S
Sbjct: 238 VLDDDDAGSAPLKSS 252
>D45131-1|BAA08109.1| 269|Homo sapiens basigin protein.
Length = 269
Score = 59.3 bits (137), Expect = 8e-09
Identities = 37/75 (49%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Frame = +2
Query: 98 DAGVYACVPAGGV-ADSAM--LRVKDKYAALWPFLGICAEVFVLCAIILVYEKRRTKPDN 268
D G Y C +D A+ LRV+ AALWPFLGI AEV VL II +YEKRR KP++
Sbjct: 179 DPGQYRCNGTSSKGSDQAIITLRVRSHLAALWPFLGIVAEVLVLVTIIFIYEKRR-KPED 237
Query: 269 --DDSDTENHDQKKS 307
DD D + K S
Sbjct: 238 VLDDDDAGSAPLKSS 252
>BC009040-1|AAH09040.1| 269|Homo sapiens basigin (Ok blood group)
protein.
Length = 269
Score = 59.3 bits (137), Expect = 8e-09
Identities = 37/75 (49%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Frame = +2
Query: 98 DAGVYACVPAGGV-ADSAM--LRVKDKYAALWPFLGICAEVFVLCAIILVYEKRRTKPDN 268
D G Y C +D A+ LRV+ AALWPFLGI AEV VL II +YEKRR KP++
Sbjct: 179 DPGQYRCNGTSSKGSDQAIITLRVRSHLAALWPFLGIVAEVLVLVTIIFIYEKRR-KPED 237
Query: 269 --DDSDTENHDQKKS 307
DD D + K S
Sbjct: 238 VLDDDDAGSAPLKSS 252
>AY942196-1|AAX20110.1| 385|Homo sapiens basigin (OK blood group)
protein.
Length = 385
Score = 59.3 bits (137), Expect = 8e-09
Identities = 37/75 (49%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Frame = +2
Query: 98 DAGVYACVPAGGV-ADSAM--LRVKDKYAALWPFLGICAEVFVLCAIILVYEKRRTKPDN 268
D G Y C +D A+ LRV+ AALWPFLGI AEV VL II +YEKRR KP++
Sbjct: 295 DPGQYRCNGTSSKGSDQAIITLRVRSHLAALWPFLGIVAEVLVLVTIIFIYEKRR-KPED 353
Query: 269 --DDSDTENHDQKKS 307
DD D + K S
Sbjct: 354 VLDDDDAGSAPLKSS 368
>AY358113-1|AAQ88480.1| 385|Homo sapiens EMMPRIN protein.
Length = 385
Score = 59.3 bits (137), Expect = 8e-09
Identities = 37/75 (49%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Frame = +2
Query: 98 DAGVYACVPAGGV-ADSAM--LRVKDKYAALWPFLGICAEVFVLCAIILVYEKRRTKPDN 268
D G Y C +D A+ LRV+ AALWPFLGI AEV VL II +YEKRR KP++
Sbjct: 295 DPGQYRCNGTSSKGSDQAIITLRVRSHLAALWPFLGIVAEVLVLVTIIFIYEKRR-KPED 353
Query: 269 --DDSDTENHDQKKS 307
DD D + K S
Sbjct: 354 VLDDDDAGSAPLKSS 368
>AF548371-1|AAN40694.1| 385|Homo sapiens basigin long isoform
protein.
Length = 385
Score = 59.3 bits (137), Expect = 8e-09
Identities = 37/75 (49%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Frame = +2
Query: 98 DAGVYACVPAGGV-ADSAM--LRVKDKYAALWPFLGICAEVFVLCAIILVYEKRRTKPDN 268
D G Y C +D A+ LRV+ AALWPFLGI AEV VL II +YEKRR KP++
Sbjct: 295 DPGQYRCNGTSSKGSDQAIITLRVRSHLAALWPFLGIVAEVLVLVTIIFIYEKRR-KPED 353
Query: 269 --DDSDTENHDQKKS 307
DD D + K S
Sbjct: 354 VLDDDDAGSAPLKSS 368
>AF042854-1|AAD10704.1| 269|Homo sapiens EMMPRIN protein.
Length = 269
Score = 59.3 bits (137), Expect = 8e-09
Identities = 37/75 (49%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Frame = +2
Query: 98 DAGVYACVPAGGV-ADSAM--LRVKDKYAALWPFLGICAEVFVLCAIILVYEKRRTKPDN 268
D G Y C +D A+ LRV+ AALWPFLGI AEV VL II +YEKRR KP++
Sbjct: 179 DPGQYRCNGTSSKGSDQAIITLRVRSHLAALWPFLGIVAEVLVLVTIIFIYEKRR-KPED 237
Query: 269 --DDSDTENHDQKKS 307
DD D + K S
Sbjct: 238 VLDDDDAGSAPLKSS 252
>AC005559-1|AAC33279.1| 269|Homo sapiens basigin protein.
Length = 269
Score = 59.3 bits (137), Expect = 8e-09
Identities = 37/75 (49%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Frame = +2
Query: 98 DAGVYACVPAGGV-ADSAM--LRVKDKYAALWPFLGICAEVFVLCAIILVYEKRRTKPDN 268
D G Y C +D A+ LRV+ AALWPFLGI AEV VL II +YEKRR KP++
Sbjct: 179 DPGQYRCNGTSSKGSDQAIITLRVRSHLAALWPFLGIVAEVLVLVTIIFIYEKRR-KPED 237
Query: 269 --DDSDTENHDQKKS 307
DD D + K S
Sbjct: 238 VLDDDDAGSAPLKSS 252
>AB091680-1|BAC67168.1| 269|Homo sapiens cervical EMMPRIN protein.
Length = 269
Score = 59.3 bits (137), Expect = 8e-09
Identities = 37/75 (49%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Frame = +2
Query: 98 DAGVYACVPAGGV-ADSAM--LRVKDKYAALWPFLGICAEVFVLCAIILVYEKRRTKPDN 268
D G Y C +D A+ LRV+ AALWPFLGI AEV VL II +YEKRR KP++
Sbjct: 179 DPGQYRCNGTSSKGSDQAIITLRVRSHLAALWPFLGIVAEVLVLVTIIFIYEKRR-KPED 237
Query: 269 --DDSDTENHDQKKS 307
DD D + K S
Sbjct: 238 VLDDDDAGSAPLKSS 252
>BC117462-1|AAI17463.1| 282|Homo sapiens neuroplastin protein.
Length = 282
Score = 58.4 bits (135), Expect = 1e-08
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Frame = +2
Query: 98 DAGVYACVPAGGVADSAM---LRVKDKYAALWPFLGICAEVFVLCAIILVYEKRRTKPDN 268
D G Y C + +++ LRV+ A LWPFLGI AE+ +L II+VYEKR+ +PD
Sbjct: 194 DPGEYECNATNAIGSASVVTVLRVRSHLAPLWPFLGILAEIIILVVIIVVYEKRK-RPDE 252
Query: 269 DDSDTENHDQKKS*ATD 319
D E K+ +T+
Sbjct: 253 VPDDDEPAGPMKTNSTN 269
>BC105979-1|AAI05980.1| 282|Homo sapiens neuroplastin protein.
Length = 282
Score = 58.4 bits (135), Expect = 1e-08
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Frame = +2
Query: 98 DAGVYACVPAGGVADSAM---LRVKDKYAALWPFLGICAEVFVLCAIILVYEKRRTKPDN 268
D G Y C + +++ LRV+ A LWPFLGI AE+ +L II+VYEKR+ +PD
Sbjct: 194 DPGEYECNATNAIGSASVVTVLRVRSHLAPLWPFLGILAEIIILVVIIVVYEKRK-RPDE 252
Query: 269 DDSDTENHDQKKS*ATD 319
D E K+ +T+
Sbjct: 253 VPDDDEPAGPMKTNSTN 269
>AF109127-1|AAD43218.1| 282|Homo sapiens stromal cell-derived
receptor-1 alpha protein.
Length = 282
Score = 58.4 bits (135), Expect = 1e-08
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Frame = +2
Query: 98 DAGVYACVPAGGVADSAM---LRVKDKYAALWPFLGICAEVFVLCAIILVYEKRRTKPDN 268
D G Y C + +++ LRV+ A LWPFLGI AE+ +L II+VYEKR+ +PD
Sbjct: 194 DPGEYECNATNAIGSASVVTVLRVRSHLAPLWPFLGILAEIIILVVIIVVYEKRK-RPDE 252
Query: 269 DDSDTENHDQKKS*ATD 319
D E K+ +T+
Sbjct: 253 VPDDDEPAGPMKTNSTN 269
>AF109126-1|AAD43217.1| 398|Homo sapiens stromal cell-derived
receptor-1 beta protein.
Length = 398
Score = 58.4 bits (135), Expect = 1e-08
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Frame = +2
Query: 98 DAGVYACVPAGGVADSAM---LRVKDKYAALWPFLGICAEVFVLCAIILVYEKRRTKPDN 268
D G Y C + +++ LRV+ A LWPFLGI AE+ +L II+VYEKR+ +PD
Sbjct: 310 DPGEYECNATNAIGSASVVTVLRVRSHLAPLWPFLGILAEIIILVVIIVVYEKRK-RPDE 368
Query: 269 DDSDTENHDQKKS*ATD 319
D E K+ +T+
Sbjct: 369 VPDDDEPAGPMKTNSTN 385
>AB072923-1|BAB88938.1| 269|Homo sapiens EMMPRIN protein.
Length = 269
Score = 57.2 bits (132), Expect = 3e-08
Identities = 37/75 (49%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Frame = +2
Query: 98 DAGVYACVPAGGV-ADSAM--LRVKDKYAALWPFLGICAEVFVLCAIILVYEKRRTKPDN 268
D G Y C +D A+ LRV AALWPFLGI AEV VL II +YEKRR KP++
Sbjct: 179 DPGQYRCNGTSSKGSDQAIITLRVCSHLAALWPFLGIVAEVLVLVTIIFIYEKRR-KPED 237
Query: 269 --DDSDTENHDQKKS 307
DD D + K S
Sbjct: 238 VLDDDDAGSAPLKSS 252
>AB085790-1|BAC76828.1| 269|Homo sapiens CD147 protein.
Length = 269
Score = 56.8 bits (131), Expect = 5e-08
Identities = 36/75 (48%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Frame = +2
Query: 98 DAGVYACVPAGGV-ADSAM--LRVKDKYAALWPFLGICAEVFVLCAIILVYEKRRTKPDN 268
D G Y C +D A+ LRV+ AALWP LGI AEV VL II +YEKRR KP++
Sbjct: 179 DPGQYRCNGTSSKGSDQAIITLRVRSHLAALWPLLGIVAEVLVLVTIIFIYEKRR-KPED 237
Query: 269 --DDSDTENHDQKKS 307
DD D + K S
Sbjct: 238 VLDDDDAGSAPLKSS 252
>BC142689-1|AAI42690.1| 1024|Homo sapiens PSD protein protein.
Length = 1024
Score = 29.9 bits (64), Expect = 5.9
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -3
Query: 410 STTSLDVIPMRCRRHADATTTL-RRHYADAARQS 312
S T LD +P+RC R D L R AD+A +S
Sbjct: 284 SETDLDTVPLRCYRETDIDEVLAEREEADSAIES 317
>BC142643-1|AAI42644.1| 1024|Homo sapiens PSD protein protein.
Length = 1024
Score = 29.9 bits (64), Expect = 5.9
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -3
Query: 410 STTSLDVIPMRCRRHADATTTL-RRHYADAARQS 312
S T LD +P+RC R D L R AD+A +S
Sbjct: 284 SETDLDTVPLRCYRETDIDEVLAEREEADSAIES 317
>BC059398-1|AAH59398.1| 327|Homo sapiens embigin homolog (mouse)
protein.
Length = 327
Score = 29.9 bits (64), Expect = 5.9
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +2
Query: 179 LWPFLGICAEVFVLCAIILVYEK---RRTKPDNDDSDTENHDQKKS 307
L PFL I AEV +L A IL+ EK ++ K ++ + E +Q KS
Sbjct: 261 LKPFLVIVAEVILLVATILLCEKYTQKKKKHSDEGKEFEQIEQLKS 306
>BC039259-1|AAH39259.2| 927|Homo sapiens PSD protein protein.
Length = 927
Score = 29.9 bits (64), Expect = 5.9
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -3
Query: 410 STTSLDVIPMRCRRHADATTTL-RRHYADAARQS 312
S T LD +P+RC R D L R AD+A +S
Sbjct: 187 SETDLDTVPLRCYRETDIDEVLAEREEADSAIES 220
>AL121928-3|CAI12516.1| 1024|Homo sapiens pleckstrin and Sec7 domain
containing protein.
Length = 1024
Score = 29.9 bits (64), Expect = 5.9
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -3
Query: 410 STTSLDVIPMRCRRHADATTTL-RRHYADAARQS 312
S T LD +P+RC R D L R AD+A +S
Sbjct: 284 SETDLDTVPLRCYRETDIDEVLAEREEADSAIES 317
>AB095931-1|BAC23107.1| 1091|Homo sapiens KIAA2011 protein protein.
Length = 1091
Score = 29.9 bits (64), Expect = 5.9
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -3
Query: 410 STTSLDVIPMRCRRHADATTTL-RRHYADAARQS 312
S T LD +P+RC R D L R AD+A +S
Sbjct: 351 SETDLDTVPLRCYRETDIDEVLAEREEADSAIES 384
>BC103509-1|AAI03510.1| 958|Homo sapiens SLIT and NTRK-like family,
member 5 protein.
Length = 958
Score = 29.5 bits (63), Expect = 7.8
Identities = 22/64 (34%), Positives = 28/64 (43%)
Frame = +2
Query: 104 GVYACVPAGGVADSAMLRVKDKYAALWPFLGICAEVFVLCAIILVYEKRRTKPDNDDSDT 283
G A + AGG A S L V L L VFV + ++ KRR K +D + T
Sbjct: 647 GAPASLGAGGGASSVPLSV----LILSLLLVFIMSVFVAAGLFVLVMKRRKKNQSDHTST 702
Query: 284 ENHD 295
N D
Sbjct: 703 NNSD 706
>BC098106-1|AAH98106.1| 958|Homo sapiens SLIT and NTRK-like family,
member 5 protein.
Length = 958
Score = 29.5 bits (63), Expect = 7.8
Identities = 22/64 (34%), Positives = 28/64 (43%)
Frame = +2
Query: 104 GVYACVPAGGVADSAMLRVKDKYAALWPFLGICAEVFVLCAIILVYEKRRTKPDNDDSDT 283
G A + AGG A S L V L L VFV + ++ KRR K +D + T
Sbjct: 647 GAPASLGAGGGASSVPLSV----LILSLLLVFIMSVFVAAGLFVLVMKRRKKNQSDHTST 702
Query: 284 ENHD 295
N D
Sbjct: 703 NNSD 706
>AL603883-1|CAH73026.1| 958|Homo sapiens SLIT and NTRK-like family,
member 5 protein.
Length = 958
Score = 29.5 bits (63), Expect = 7.8
Identities = 22/64 (34%), Positives = 28/64 (43%)
Frame = +2
Query: 104 GVYACVPAGGVADSAMLRVKDKYAALWPFLGICAEVFVLCAIILVYEKRRTKPDNDDSDT 283
G A + AGG A S L V L L VFV + ++ KRR K +D + T
Sbjct: 647 GAPASLGAGGGASSVPLSV----LILSLLLVFIMSVFVAAGLFVLVMKRRKKNQSDHTST 702
Query: 284 ENHD 295
N D
Sbjct: 703 NNSD 706
>AB020725-1|BAA74941.1| 966|Homo sapiens KIAA0918 protein protein.
Length = 966
Score = 29.5 bits (63), Expect = 7.8
Identities = 22/64 (34%), Positives = 28/64 (43%)
Frame = +2
Query: 104 GVYACVPAGGVADSAMLRVKDKYAALWPFLGICAEVFVLCAIILVYEKRRTKPDNDDSDT 283
G A + AGG A S L V L L VFV + ++ KRR K +D + T
Sbjct: 655 GAPASLGAGGGASSVPLSV----LILSLLLVFIMSVFVAAGLFVLVMKRRKKNQSDHTST 710
Query: 284 ENHD 295
N D
Sbjct: 711 NNSD 714
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,949,733
Number of Sequences: 237096
Number of extensions: 608712
Number of successful extensions: 1736
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1736
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5216942984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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