Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_I16
(535 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical pr... 30 0.91
Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical pr... 30 0.91
Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical p... 30 0.91
Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical pr... 30 0.91
AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical ... 30 0.91
AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical ... 30 0.91
AL021386-3|CAA16167.1| 330|Caenorhabditis elegans Hypothetical ... 29 2.1
Z68882-13|CAA93102.1| 296|Caenorhabditis elegans Hypothetical p... 27 6.4
U49830-7|AAM98046.1| 774|Caenorhabditis elegans Neuronal igcam ... 27 6.4
U49830-6|AAK31481.1| 964|Caenorhabditis elegans Neuronal igcam ... 27 6.4
U49830-5|AAK31482.1| 1227|Caenorhabditis elegans Neuronal igcam ... 27 6.4
U49830-4|AAU20850.1| 1196|Caenorhabditis elegans Neuronal igcam ... 27 6.4
Z79639-6|CAB01919.3| 957|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z79639-5|CAD42645.2| 972|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z79598-9|CAB01869.3| 957|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z79598-8|CAD42646.2| 972|Caenorhabditis elegans Hypothetical pr... 27 8.5
AF519110-1|AAM74224.1| 957|Caenorhabditis elegans EOR-2B protein. 27 8.5
AF519109-1|AAM74223.1| 972|Caenorhabditis elegans EOR-2A protein. 27 8.5
AF502570-1|AAM74152.1| 972|Caenorhabditis elegans EOR-2 protein. 27 8.5
>Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical protein
T06D8.1b protein.
Length = 3653
Score = 30.3 bits (65), Expect = 0.91
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -2
Query: 237 TRMMAQSTNTSAQMPRNGHSAAYLSLTRSMAESATPPAGTHA 112
T ++ T TSA +G ++T + +E+ T PAGT A
Sbjct: 2045 TEASSEETTTSAVTEGSGEETTTSAVTEASSEATTTPAGTEA 2086
>Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical protein
T06D8.1a protein.
Length = 3719
Score = 30.3 bits (65), Expect = 0.91
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -2
Query: 237 TRMMAQSTNTSAQMPRNGHSAAYLSLTRSMAESATPPAGTHA 112
T ++ T TSA +G ++T + +E+ T PAGT A
Sbjct: 2045 TEASSEETTTSAVTEGSGEETTTSAVTEASSEATTTPAGTEA 2086
>Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 30.3 bits (65), Expect = 0.91
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -2
Query: 237 TRMMAQSTNTSAQMPRNGHSAAYLSLTRSMAESATPPAGTHA 112
T ++ T TSA +G ++T + +E+ T PAGT A
Sbjct: 2045 TEASSEETTTSAVTEGSGEETTTSAVTEASSEATTTPAGTEA 2086
>Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical protein
T06D8.1a protein.
Length = 3719
Score = 30.3 bits (65), Expect = 0.91
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -2
Query: 237 TRMMAQSTNTSAQMPRNGHSAAYLSLTRSMAESATPPAGTHA 112
T ++ T TSA +G ++T + +E+ T PAGT A
Sbjct: 2045 TEASSEETTTSAVTEGSGEETTTSAVTEASSEATTTPAGTEA 2086
>AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 30.3 bits (65), Expect = 0.91
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -2
Query: 237 TRMMAQSTNTSAQMPRNGHSAAYLSLTRSMAESATPPAGTHA 112
T ++ T TSA +G ++T + +E+ T PAGT A
Sbjct: 2045 TEASSEETTTSAVTEGSGEETTTSAVTEASSEATTTPAGTEA 2086
>AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical
protein T06D8.1a protein.
Length = 3719
Score = 30.3 bits (65), Expect = 0.91
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -2
Query: 237 TRMMAQSTNTSAQMPRNGHSAAYLSLTRSMAESATPPAGTHA 112
T ++ T TSA +G ++T + +E+ T PAGT A
Sbjct: 2045 TEASSEETTTSAVTEGSGEETTTSAVTEASSEATTTPAGTEA 2086
>AL021386-3|CAA16167.1| 330|Caenorhabditis elegans Hypothetical
protein F57E7.3 protein.
Length = 330
Score = 29.1 bits (62), Expect = 2.1
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +2
Query: 110 YACVPAGGVADSAMLRVKDKYAALWPFLGICAEVFVLCAIILVYEKRRTKPDNDDSDTEN 289
Y VPA G L ++ ++G + +F + AIIL +E+R + DSDT+
Sbjct: 73 YMIVPAAGGYPLGPLLHLGVPTSVMVYIGATSILFFVPAIILFFEERYNRLLRRDSDTKR 132
Query: 290 HDQKK 304
K+
Sbjct: 133 RKIKR 137
>Z68882-13|CAA93102.1| 296|Caenorhabditis elegans Hypothetical
protein C47E12.10 protein.
Length = 296
Score = 27.5 bits (58), Expect = 6.4
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +2
Query: 209 VFVLCAIILVYEKRRTKPDNDDSDTENHDQKKS*ATDEQ 325
+F+ C EK ++ + +D D+EN ++K A D++
Sbjct: 35 LFIQCGSKKKKEKSESEDETEDEDSENQRRRKKRAADKK 73
>U49830-7|AAM98046.1| 774|Caenorhabditis elegans Neuronal igcam
protein 6, isoform c protein.
Length = 774
Score = 27.5 bits (58), Expect = 6.4
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Frame = +2
Query: 98 DAGVYACVPA---GGVADSAMLRVKDKYAALWPFLGICAEVF 214
D+GVY CV + G + SA+L VKD A ++P + +VF
Sbjct: 89 DSGVYQCVASNDVGSSSSSALLTVKDS-APVFPPNAMSRKVF 129
>U49830-6|AAK31481.1| 964|Caenorhabditis elegans Neuronal igcam
protein 6, isoform a protein.
Length = 964
Score = 27.5 bits (58), Expect = 6.4
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Frame = +2
Query: 98 DAGVYACVPA---GGVADSAMLRVKDKYAALWPFLGICAEVF 214
D+GVY CV + G + SA+L VKD A ++P + +VF
Sbjct: 279 DSGVYQCVASNDVGSSSSSALLTVKDS-APVFPPNAMSRKVF 319
>U49830-5|AAK31482.1| 1227|Caenorhabditis elegans Neuronal igcam
protein 6, isoform b protein.
Length = 1227
Score = 27.5 bits (58), Expect = 6.4
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Frame = +2
Query: 98 DAGVYACVPA---GGVADSAMLRVKDKYAALWPFLGICAEVF 214
D+GVY CV + G + SA+L VKD A ++P + +VF
Sbjct: 542 DSGVYQCVASNDVGSSSSSALLTVKDS-APVFPPNAMSRKVF 582
>U49830-4|AAU20850.1| 1196|Caenorhabditis elegans Neuronal igcam
protein 6, isoform d protein.
Length = 1196
Score = 27.5 bits (58), Expect = 6.4
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Frame = +2
Query: 98 DAGVYACVPA---GGVADSAMLRVKDKYAALWPFLGICAEVF 214
D+GVY CV + G + SA+L VKD A ++P + +VF
Sbjct: 511 DSGVYQCVASNDVGSSSSSALLTVKDS-APVFPPNAMSRKVF 551
>Z79639-6|CAB01919.3| 957|Caenorhabditis elegans Hypothetical
protein C44H4.7b protein.
Length = 957
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 239 YEKRRTKPDNDDSDTENHDQKK 304
Y++++ K DNDDSD E+ +K
Sbjct: 554 YKRKKNKSDNDDSDFEDVAYRK 575
>Z79639-5|CAD42645.2| 972|Caenorhabditis elegans Hypothetical
protein C44H4.7a protein.
Length = 972
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 239 YEKRRTKPDNDDSDTENHDQKK 304
Y++++ K DNDDSD E+ +K
Sbjct: 569 YKRKKNKSDNDDSDFEDVAYRK 590
>Z79598-9|CAB01869.3| 957|Caenorhabditis elegans Hypothetical
protein C44H4.7b protein.
Length = 957
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 239 YEKRRTKPDNDDSDTENHDQKK 304
Y++++ K DNDDSD E+ +K
Sbjct: 554 YKRKKNKSDNDDSDFEDVAYRK 575
>Z79598-8|CAD42646.2| 972|Caenorhabditis elegans Hypothetical
protein C44H4.7a protein.
Length = 972
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 239 YEKRRTKPDNDDSDTENHDQKK 304
Y++++ K DNDDSD E+ +K
Sbjct: 569 YKRKKNKSDNDDSDFEDVAYRK 590
>AF519110-1|AAM74224.1| 957|Caenorhabditis elegans EOR-2B protein.
Length = 957
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 239 YEKRRTKPDNDDSDTENHDQKK 304
Y++++ K DNDDSD E+ +K
Sbjct: 554 YKRKKNKSDNDDSDFEDVAYRK 575
>AF519109-1|AAM74223.1| 972|Caenorhabditis elegans EOR-2A protein.
Length = 972
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 239 YEKRRTKPDNDDSDTENHDQKK 304
Y++++ K DNDDSD E+ +K
Sbjct: 569 YKRKKNKSDNDDSDFEDVAYRK 590
>AF502570-1|AAM74152.1| 972|Caenorhabditis elegans EOR-2 protein.
Length = 972
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 239 YEKRRTKPDNDDSDTENHDQKK 304
Y++++ K DNDDSD E+ +K
Sbjct: 569 YKRKKNKSDNDDSDFEDVAYRK 590
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,407,037
Number of Sequences: 27780
Number of extensions: 100301
Number of successful extensions: 424
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 422
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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