Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_I14
(562 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 105 2e-23
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 71 6e-13
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 71 6e-13
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 71 6e-13
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 71 6e-13
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 71 6e-13
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 71 6e-13
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 71 6e-13
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 71 6e-13
U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical pr... 64 9e-11
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 45 4e-05
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 45 4e-05
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 45 4e-05
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 45 4e-05
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 44 8e-05
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 44 8e-05
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 44 8e-05
Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical pr... 42 3e-04
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 42 3e-04
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 42 3e-04
Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical pr... 40 0.001
U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein. 40 0.001
U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein. 40 0.001
AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin relat... 40 0.002
AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical ... 39 0.002
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 38 0.004
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 38 0.004
AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical ... 35 0.046
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr... 34 0.080
Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical pr... 33 0.11
Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical pr... 33 0.11
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 33 0.11
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 33 0.11
L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain (pr... 33 0.19
L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain (pr... 33 0.19
AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical ... 32 0.32
AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein. 31 0.43
Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical pr... 31 0.57
Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical pr... 31 0.57
M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein ( C.ele... 31 0.57
Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical pr... 31 0.75
U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical pr... 31 0.75
AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ... 31 0.75
U62281-1|AAD09363.1| 925|Caenorhabditis elegans lipoprotein rec... 30 0.99
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 30 0.99
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z81071-6|CAB03010.1| 464|Caenorhabditis elegans Hypothetical pr... 29 1.7
U62639-1|AAD09364.1| 925|Caenorhabditis elegans lr protein. 29 1.7
AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical... 29 1.7
AF185706-1|AAD56241.1| 925|Caenorhabditis elegans yolk receptor... 29 1.7
AF036703-1|AAB88554.3| 925|Caenorhabditis elegans Receptor medi... 29 1.7
AC084159-15|AAK39353.1| 418|Caenorhabditis elegans Hypothetical... 29 1.7
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 29 2.3
U28741-4|AAA68328.1| 747|Caenorhabditis elegans Hypothetical pr... 29 2.3
U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile (un... 29 2.3
AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical ... 29 2.3
AF016439-2|AAB65897.1| 176|Caenorhabditis elegans Hypothetical ... 29 3.0
AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical ... 29 3.0
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 4.0
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 4.0
Z81496-9|CAB04065.1| 153|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 28 5.3
AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical ... 28 5.3
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 28 5.3
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 28 5.3
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical p... 27 7.0
Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical p... 27 7.0
Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical p... 27 7.0
Z54281-2|CAA91045.3| 399|Caenorhabditis elegans Hypothetical pr... 27 7.0
U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical pr... 27 7.0
U80847-6|AAK68190.1| 796|Caenorhabditis elegans Hypothetical pr... 27 7.0
U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical pr... 27 7.0
U28971-1|AAA68376.2| 551|Caenorhabditis elegans Egg sterile (un... 27 7.0
AL132895-2|CAC14404.1| 613|Caenorhabditis elegans Hypothetical ... 27 7.0
AL117193-10|CAB60304.1| 337|Caenorhabditis elegans Hypothetical... 27 7.0
AL110498-7|CAB57909.2| 302|Caenorhabditis elegans Hypothetical ... 27 7.0
AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical ... 27 7.0
AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical ... 27 7.0
U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily ass... 27 9.2
U80955-3|AAM97944.1| 95|Caenorhabditis elegans Mlp/crp family ... 27 9.2
U80955-1|AAM97945.1| 113|Caenorhabditis elegans Mlp/crp family ... 27 9.2
AF039047-12|AAM15590.1| 226|Caenorhabditis elegans Hypothetical... 27 9.2
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 105 bits (252), Expect = 2e-23
Identities = 59/159 (37%), Positives = 72/159 (45%), Gaps = 16/159 (10%)
Frame = +2
Query: 134 MSSSVCYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEAD---- 301
MS CYKC + GH +R C G G C+ C TGHF+RDC +
Sbjct: 1 MSDRNCYKCQQPGHISRNCPNGESDGGRRG-GGGGSTCYNCQETGHFSRDCPKGGSGGGQ 59
Query: 302 --------RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNC 457
CY C G GH +R+C PS + +G E GR Q CYNC
Sbjct: 60 RGGGGGGGSCYNCGGRGHYSRDC------PSARSEGGSGGYGGRGGE-GRSFGGQKCYNC 112
Query: 458 NKSGHISRNCPDG----TKTCYVCGQPGHISRDCDEERN 562
+SGHISR C + K CY C + GHISRDC + N
Sbjct: 113 GRSGHISRECTESGSAEEKRCYQCQETGHISRDCPSQTN 151
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 70.9 bits (166), Expect = 6e-13
Identities = 39/126 (30%), Positives = 51/126 (40%), Gaps = 17/126 (13%)
Frame = +2
Query: 221 GFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDEPSCYN 379
G + CF C + GH + DC KE R CY C GH +REC + P E
Sbjct: 152 GGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGG 211
Query: 380 CNKTGHIARNCPE----------GGRDNSNQTCYNCNKSGHISRNCPDGTKTCYVCGQPG 529
N GG + C+NC GH S CP+ + C+ CG+ G
Sbjct: 212 FGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQG 271
Query: 530 HISRDC 547
H S +C
Sbjct: 272 HRSNEC 277
Score = 57.2 bits (132), Expect = 8e-09
Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Frame = +2
Query: 419 GGRDNSNQTCYNCNKSGHISRNCPDGTK-----TCYVCGQPGHISRDCDEER 559
GG N+N C+NC + GH S +CP+ K CY C QPGH SR+C EER
Sbjct: 153 GGERNNN--CFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER 202
Score = 53.2 bits (122), Expect = 1e-07
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 17/135 (12%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEAD-RCYRCNGT 325
C+ C + GH + +C + R+ C+ C + GH +R+C EE R R G
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 326 GHIARECAQSPDEP----------------SCYNCNKTGHIARNCPEGGRDNSNQTCYNC 457
G A ++ C+NC GH + CPE R C+NC
Sbjct: 213 GGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNC 267
Query: 458 NKSGHISRNCPDGTK 502
+ GH S CP+ K
Sbjct: 268 GEQGHRSNECPNPAK 282
Score = 46.8 bits (106), Expect = 1e-05
Identities = 32/101 (31%), Positives = 41/101 (40%), Gaps = 27/101 (26%)
Frame = +2
Query: 146 VCYKCNRTGHFARECTQ-------------GGV----------CARDAGFNRQRE----K 244
VCY C + GH +RECT+ GG D GF E K
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEERGPMK 243
Query: 245 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 367
CF C GH + +C E C+ C GH + EC +P +P
Sbjct: 244 CFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 70.9 bits (166), Expect = 6e-13
Identities = 39/120 (32%), Positives = 54/120 (45%), Gaps = 15/120 (12%)
Frame = +2
Query: 233 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCY 376
+ CF C + GH + DC KE R CY C GH +R+C + P E S +
Sbjct: 369 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGF 428
Query: 377 NCNKTGHIARNCPEGGRDNSNQ---TCYNCNKSGHISRNCPDGTKTCYVCGQPGHISRDC 547
G EG +N + C+NC GH S CP+ + C+ CG+ GH S +C
Sbjct: 429 GGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 488
Score = 64.1 bits (149), Expect = 7e-11
Identities = 48/164 (29%), Positives = 66/164 (40%), Gaps = 27/164 (16%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDC-KEEADRCYRCN-- 319
C+ C + GH + +C + R+ C+ C + GH +RDC +E R R
Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 311
Query: 320 ------------GTGH---IARECAQSPDEPSCYNCNKTGHIARNCPEGG----RDNSNQ 442
GTG + + S + G + GG R N
Sbjct: 312 GGSSGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNN 371
Query: 443 TCYNCNKSGHISRNCPDGTK-----TCYVCGQPGHISRDCDEER 559
C+NC + GH S +CP+ K CY C QPGH SRDC EER
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 415
Score = 60.1 bits (139), Expect = 1e-09
Identities = 38/134 (28%), Positives = 57/134 (42%), Gaps = 15/134 (11%)
Frame = +2
Query: 146 VCYKCNRTGHFARECTQ--------GGVCARDAGF--NRQREKCFKCNRTGHFARDCKEE 295
VCY C + GH +R+C + G +GF F T F E
Sbjct: 283 VCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGE 342
Query: 296 A---DRCYRCNGTGHIARECAQSPDE--PSCYNCNKTGHIARNCPEGGRDNSNQTCYNCN 460
+ + N G + Q E +C+NC + GH + +CPE ++ + CYNC
Sbjct: 343 SGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQ 402
Query: 461 KSGHISRNCPDGTK 502
+ GH SR+CP+ K
Sbjct: 403 QPGHNSRDCPEERK 416
Score = 59.3 bits (137), Expect = 2e-09
Identities = 27/54 (50%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Frame = +2
Query: 419 GGRDNS--NQTCYNCNKSGHISRNCPDGTK-----TCYVCGQPGHISRDCDEER 559
GG+D N C+NC + GH S +CP+ K CY C QPGH SRDC EER
Sbjct: 248 GGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 58.0 bits (134), Expect = 4e-09
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +2
Query: 146 VCYKCNRTGHFARECTQG-----GVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCY 310
VCY C + GH +R+C + G +GF + F F + + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 311 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 415
C G GH + EC + P C+NC + GH + CP
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 489
Score = 57.6 bits (133), Expect = 6e-09
Identities = 19/45 (42%), Positives = 30/45 (66%)
Frame = +2
Query: 368 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 502
+C+NC + GH + +CPE ++ + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 56.4 bits (130), Expect = 1e-08
Identities = 37/133 (27%), Positives = 53/133 (39%), Gaps = 15/133 (11%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGT- 325
C+ C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 425
Query: 326 ------------GHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNK 463
G A + + C+NC GH + CPE R C+NC +
Sbjct: 426 SGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNCGE 480
Query: 464 SGHISRNCPDGTK 502
GH S CP+ K
Sbjct: 481 QGHRSNECPNPAK 493
Score = 50.8 bits (116), Expect = 7e-07
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Frame = +2
Query: 263 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE----- 418
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 418
Query: 419 -------GGRDNSNQTCYNCNKSGHISRNCPDGTKTCYVCGQPGHISRDCDE 553
G N + + N G C+ C GH S +C E
Sbjct: 419 EGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 48.4 bits (110), Expect = 3e-06
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +2
Query: 263 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRDN 433
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304
Query: 434 SNQTCYNCNKSG 469
+ + SG
Sbjct: 305 EGRNGFTGGSSG 316
Score = 42.7 bits (96), Expect = 2e-04
Identities = 38/136 (27%), Positives = 52/136 (38%), Gaps = 27/136 (19%)
Frame = +2
Query: 233 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ--SPDE--------P 367
+ CF C + GH + DC KE R CY C GH +R+C + P E
Sbjct: 255 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTGGS 314
Query: 368 SCY---NCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDG---------TKTCY 511
S + N TG + G N+ ++ + G S G C+
Sbjct: 315 SGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNNNCF 374
Query: 512 VCGQPGHISRDCDEER 559
C QPGH S DC E +
Sbjct: 375 NCQQPGHRSNDCPEPK 390
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 464 SGHISRNCPDGTKTCYVCGQPGHISRDCDEER 559
SG ++ + C+ C QPGH S DC E +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPK 276
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 70.9 bits (166), Expect = 6e-13
Identities = 39/120 (32%), Positives = 54/120 (45%), Gaps = 15/120 (12%)
Frame = +2
Query: 233 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCY 376
+ CF C + GH + DC KE R CY C GH +R+C + P E S +
Sbjct: 369 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGF 428
Query: 377 NCNKTGHIARNCPEGGRDNSNQ---TCYNCNKSGHISRNCPDGTKTCYVCGQPGHISRDC 547
G EG +N + C+NC GH S CP+ + C+ CG+ GH S +C
Sbjct: 429 GGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 488
Score = 64.1 bits (149), Expect = 7e-11
Identities = 48/164 (29%), Positives = 66/164 (40%), Gaps = 27/164 (16%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDC-KEEADRCYRCN-- 319
C+ C + GH + +C + R+ C+ C + GH +RDC +E R R
Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 311
Query: 320 ------------GTGH---IARECAQSPDEPSCYNCNKTGHIARNCPEGG----RDNSNQ 442
GTG + + S + G + GG R N
Sbjct: 312 GGSSGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNN 371
Query: 443 TCYNCNKSGHISRNCPDGTK-----TCYVCGQPGHISRDCDEER 559
C+NC + GH S +CP+ K CY C QPGH SRDC EER
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 415
Score = 60.1 bits (139), Expect = 1e-09
Identities = 38/134 (28%), Positives = 57/134 (42%), Gaps = 15/134 (11%)
Frame = +2
Query: 146 VCYKCNRTGHFARECTQ--------GGVCARDAGF--NRQREKCFKCNRTGHFARDCKEE 295
VCY C + GH +R+C + G +GF F T F E
Sbjct: 283 VCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGE 342
Query: 296 A---DRCYRCNGTGHIARECAQSPDE--PSCYNCNKTGHIARNCPEGGRDNSNQTCYNCN 460
+ + N G + Q E +C+NC + GH + +CPE ++ + CYNC
Sbjct: 343 SGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQ 402
Query: 461 KSGHISRNCPDGTK 502
+ GH SR+CP+ K
Sbjct: 403 QPGHNSRDCPEERK 416
Score = 59.3 bits (137), Expect = 2e-09
Identities = 27/54 (50%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Frame = +2
Query: 419 GGRDNS--NQTCYNCNKSGHISRNCPDGTK-----TCYVCGQPGHISRDCDEER 559
GG+D N C+NC + GH S +CP+ K CY C QPGH SRDC EER
Sbjct: 248 GGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 58.0 bits (134), Expect = 4e-09
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +2
Query: 146 VCYKCNRTGHFARECTQG-----GVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCY 310
VCY C + GH +R+C + G +GF + F F + + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 311 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 415
C G GH + EC + P C+NC + GH + CP
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 489
Score = 57.6 bits (133), Expect = 6e-09
Identities = 19/45 (42%), Positives = 30/45 (66%)
Frame = +2
Query: 368 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 502
+C+NC + GH + +CPE ++ + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 56.4 bits (130), Expect = 1e-08
Identities = 37/133 (27%), Positives = 53/133 (39%), Gaps = 15/133 (11%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGT- 325
C+ C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 425
Query: 326 ------------GHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNK 463
G A + + C+NC GH + CPE R C+NC +
Sbjct: 426 SGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNCGE 480
Query: 464 SGHISRNCPDGTK 502
GH S CP+ K
Sbjct: 481 QGHRSNECPNPAK 493
Score = 50.8 bits (116), Expect = 7e-07
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Frame = +2
Query: 263 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE----- 418
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 418
Query: 419 -------GGRDNSNQTCYNCNKSGHISRNCPDGTKTCYVCGQPGHISRDCDE 553
G N + + N G C+ C GH S +C E
Sbjct: 419 EGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 48.4 bits (110), Expect = 3e-06
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +2
Query: 263 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRDN 433
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304
Query: 434 SNQTCYNCNKSG 469
+ + SG
Sbjct: 305 EGRNGFTGGSSG 316
Score = 42.7 bits (96), Expect = 2e-04
Identities = 38/136 (27%), Positives = 52/136 (38%), Gaps = 27/136 (19%)
Frame = +2
Query: 233 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ--SPDE--------P 367
+ CF C + GH + DC KE R CY C GH +R+C + P E
Sbjct: 255 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTGGS 314
Query: 368 SCY---NCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDG---------TKTCY 511
S + N TG + G N+ ++ + G S G C+
Sbjct: 315 SGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNNNCF 374
Query: 512 VCGQPGHISRDCDEER 559
C QPGH S DC E +
Sbjct: 375 NCQQPGHRSNDCPEPK 390
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 464 SGHISRNCPDGTKTCYVCGQPGHISRDCDEER 559
SG ++ + C+ C QPGH S DC E +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPK 276
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 70.9 bits (166), Expect = 6e-13
Identities = 39/126 (30%), Positives = 51/126 (40%), Gaps = 17/126 (13%)
Frame = +2
Query: 221 GFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDEPSCYN 379
G + CF C + GH + DC KE R CY C GH +REC + P E
Sbjct: 152 GGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGG 211
Query: 380 CNKTGHIARNCPE----------GGRDNSNQTCYNCNKSGHISRNCPDGTKTCYVCGQPG 529
N GG + C+NC GH S CP+ + C+ CG+ G
Sbjct: 212 FGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQG 271
Query: 530 HISRDC 547
H S +C
Sbjct: 272 HRSNEC 277
Score = 57.2 bits (132), Expect = 8e-09
Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Frame = +2
Query: 419 GGRDNSNQTCYNCNKSGHISRNCPDGTK-----TCYVCGQPGHISRDCDEER 559
GG N+N C+NC + GH S +CP+ K CY C QPGH SR+C EER
Sbjct: 153 GGERNNN--CFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER 202
Score = 53.2 bits (122), Expect = 1e-07
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 17/135 (12%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEAD-RCYRCNGT 325
C+ C + GH + +C + R+ C+ C + GH +R+C EE R R G
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 326 GHIARECAQSPDEP----------------SCYNCNKTGHIARNCPEGGRDNSNQTCYNC 457
G A ++ C+NC GH + CPE R C+NC
Sbjct: 213 GGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNC 267
Query: 458 NKSGHISRNCPDGTK 502
+ GH S CP+ K
Sbjct: 268 GEQGHRSNECPNPAK 282
Score = 46.8 bits (106), Expect = 1e-05
Identities = 32/101 (31%), Positives = 41/101 (40%), Gaps = 27/101 (26%)
Frame = +2
Query: 146 VCYKCNRTGHFARECTQ-------------GGV----------CARDAGFNRQRE----K 244
VCY C + GH +RECT+ GG D GF E K
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEERGPMK 243
Query: 245 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 367
CF C GH + +C E C+ C GH + EC +P +P
Sbjct: 244 CFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 70.9 bits (166), Expect = 6e-13
Identities = 41/124 (33%), Positives = 53/124 (42%), Gaps = 6/124 (4%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKE---EADRCYRCN 319
C+ C GH ++EC + V R C C + GHFA DC + C C
Sbjct: 572 CHNCGEEGHISKECDKPKV---------PRFPCRNCEQLGHFASDCDQPRVPRGPCRNCG 622
Query: 320 GTGHIARECAQSPDEP--SCYNCNKTGHIARNCP-EGGRDNSNQTCYNCNKSGHISRNCP 490
GH A +C Q P P C NC + GH A++C E R + C C + GH CP
Sbjct: 623 IEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECP 681
Query: 491 DGTK 502
K
Sbjct: 682 TRPK 685
Score = 66.1 bits (154), Expect = 2e-11
Identities = 38/107 (35%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Frame = +2
Query: 257 NRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS--CYNCNKTGHIARNCPEGGRD 430
N+ G++ D E C+ C GHI++EC P P C NC + GH A +C +
Sbjct: 558 NQRGNW--DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQPRVP 614
Query: 431 NSNQTCYNCNKSGHISRNCPDGTKT----CYVCGQPGHISRDCDEER 559
C NC GH + +C D K C CGQ GH ++DC ER
Sbjct: 615 RG--PCRNCGIEGHFAVDC-DQPKVPRGPCRNCGQEGHFAKDCQNER 658
Score = 56.8 bits (131), Expect = 1e-08
Identities = 35/102 (34%), Positives = 41/102 (40%), Gaps = 8/102 (7%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDC---KEEADRCYRCN 319
C C + GHFA +C Q V R C C GHFA DC K C C
Sbjct: 595 CRNCEQLGHFASDCDQPRV---------PRGPCRNCGIEGHFAVDCDQPKVPRGPCRNCG 645
Query: 320 GTGHIARECAQS-----PDEPSCYNCNKTGHIARNCPEGGRD 430
GH A++C P EP C C + GH CP +D
Sbjct: 646 QEGHFAKDCQNERVRMEPTEP-CRRCAEEGHWGYECPTRPKD 686
Score = 32.3 bits (70), Expect = 0.25
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +2
Query: 131 KMSSSVCYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDC 286
K+ C C + GHFA++C V E C +C GH+ +C
Sbjct: 635 KVPRGPCRNCGQEGHFAKDCQNERVRMEPT------EPCRRCAEEGHWGYEC 680
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 70.9 bits (166), Expect = 6e-13
Identities = 41/124 (33%), Positives = 53/124 (42%), Gaps = 6/124 (4%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKE---EADRCYRCN 319
C+ C GH ++EC + V R C C + GHFA DC + C C
Sbjct: 572 CHNCGEEGHISKECDKPKV---------PRFPCRNCEQLGHFASDCDQPRVPRGPCRNCG 622
Query: 320 GTGHIARECAQSPDEP--SCYNCNKTGHIARNCP-EGGRDNSNQTCYNCNKSGHISRNCP 490
GH A +C Q P P C NC + GH A++C E R + C C + GH CP
Sbjct: 623 IEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECP 681
Query: 491 DGTK 502
K
Sbjct: 682 TRPK 685
Score = 66.1 bits (154), Expect = 2e-11
Identities = 38/107 (35%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Frame = +2
Query: 257 NRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS--CYNCNKTGHIARNCPEGGRD 430
N+ G++ D E C+ C GHI++EC P P C NC + GH A +C +
Sbjct: 558 NQRGNW--DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQPRVP 614
Query: 431 NSNQTCYNCNKSGHISRNCPDGTKT----CYVCGQPGHISRDCDEER 559
C NC GH + +C D K C CGQ GH ++DC ER
Sbjct: 615 RG--PCRNCGIEGHFAVDC-DQPKVPRGPCRNCGQEGHFAKDCQNER 658
Score = 56.8 bits (131), Expect = 1e-08
Identities = 35/102 (34%), Positives = 41/102 (40%), Gaps = 8/102 (7%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDC---KEEADRCYRCN 319
C C + GHFA +C Q V R C C GHFA DC K C C
Sbjct: 595 CRNCEQLGHFASDCDQPRV---------PRGPCRNCGIEGHFAVDCDQPKVPRGPCRNCG 645
Query: 320 GTGHIARECAQS-----PDEPSCYNCNKTGHIARNCPEGGRD 430
GH A++C P EP C C + GH CP +D
Sbjct: 646 QEGHFAKDCQNERVRMEPTEP-CRRCAEEGHWGYECPTRPKD 686
Score = 32.3 bits (70), Expect = 0.25
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +2
Query: 131 KMSSSVCYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDC 286
K+ C C + GHFA++C V E C +C GH+ +C
Sbjct: 635 KVPRGPCRNCGQEGHFAKDCQNERVRMEPT------EPCRRCAEEGHWGYEC 680
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 70.9 bits (166), Expect = 6e-13
Identities = 39/126 (30%), Positives = 51/126 (40%), Gaps = 17/126 (13%)
Frame = +2
Query: 221 GFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDEPSCYN 379
G + CF C + GH + DC KE R CY C GH +REC + P E
Sbjct: 152 GGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGG 211
Query: 380 CNKTGHIARNCPE----------GGRDNSNQTCYNCNKSGHISRNCPDGTKTCYVCGQPG 529
N GG + C+NC GH S CP+ + C+ CG+ G
Sbjct: 212 FGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQG 271
Query: 530 HISRDC 547
H S +C
Sbjct: 272 HRSNEC 277
Score = 57.2 bits (132), Expect = 8e-09
Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Frame = +2
Query: 419 GGRDNSNQTCYNCNKSGHISRNCPDGTK-----TCYVCGQPGHISRDCDEER 559
GG N+N C+NC + GH S +CP+ K CY C QPGH SR+C EER
Sbjct: 153 GGERNNN--CFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER 202
Score = 53.2 bits (122), Expect = 1e-07
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 17/135 (12%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEAD-RCYRCNGT 325
C+ C + GH + +C + R+ C+ C + GH +R+C EE R R G
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 326 GHIARECAQSPDEP----------------SCYNCNKTGHIARNCPEGGRDNSNQTCYNC 457
G A ++ C+NC GH + CPE R C+NC
Sbjct: 213 GGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNC 267
Query: 458 NKSGHISRNCPDGTK 502
+ GH S CP+ K
Sbjct: 268 GEQGHRSNECPNPAK 282
Score = 46.8 bits (106), Expect = 1e-05
Identities = 32/101 (31%), Positives = 41/101 (40%), Gaps = 27/101 (26%)
Frame = +2
Query: 146 VCYKCNRTGHFARECTQ-------------GGV----------CARDAGFNRQRE----K 244
VCY C + GH +RECT+ GG D GF E K
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEERGPMK 243
Query: 245 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 367
CF C GH + +C E C+ C GH + EC +P +P
Sbjct: 244 CFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 70.9 bits (166), Expect = 6e-13
Identities = 39/120 (32%), Positives = 54/120 (45%), Gaps = 15/120 (12%)
Frame = +2
Query: 233 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCY 376
+ CF C + GH + DC KE R CY C GH +R+C + P E S +
Sbjct: 369 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGF 428
Query: 377 NCNKTGHIARNCPEGGRDNSNQ---TCYNCNKSGHISRNCPDGTKTCYVCGQPGHISRDC 547
G EG +N + C+NC GH S CP+ + C+ CG+ GH S +C
Sbjct: 429 GGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 488
Score = 64.1 bits (149), Expect = 7e-11
Identities = 48/164 (29%), Positives = 66/164 (40%), Gaps = 27/164 (16%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDC-KEEADRCYRCN-- 319
C+ C + GH + +C + R+ C+ C + GH +RDC +E R R
Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 311
Query: 320 ------------GTGH---IARECAQSPDEPSCYNCNKTGHIARNCPEGG----RDNSNQ 442
GTG + + S + G + GG R N
Sbjct: 312 GGSSGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNN 371
Query: 443 TCYNCNKSGHISRNCPDGTK-----TCYVCGQPGHISRDCDEER 559
C+NC + GH S +CP+ K CY C QPGH SRDC EER
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 415
Score = 60.1 bits (139), Expect = 1e-09
Identities = 38/134 (28%), Positives = 57/134 (42%), Gaps = 15/134 (11%)
Frame = +2
Query: 146 VCYKCNRTGHFARECTQ--------GGVCARDAGF--NRQREKCFKCNRTGHFARDCKEE 295
VCY C + GH +R+C + G +GF F T F E
Sbjct: 283 VCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGE 342
Query: 296 A---DRCYRCNGTGHIARECAQSPDE--PSCYNCNKTGHIARNCPEGGRDNSNQTCYNCN 460
+ + N G + Q E +C+NC + GH + +CPE ++ + CYNC
Sbjct: 343 SGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQ 402
Query: 461 KSGHISRNCPDGTK 502
+ GH SR+CP+ K
Sbjct: 403 QPGHNSRDCPEERK 416
Score = 59.3 bits (137), Expect = 2e-09
Identities = 27/54 (50%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Frame = +2
Query: 419 GGRDNS--NQTCYNCNKSGHISRNCPDGTK-----TCYVCGQPGHISRDCDEER 559
GG+D N C+NC + GH S +CP+ K CY C QPGH SRDC EER
Sbjct: 248 GGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 58.0 bits (134), Expect = 4e-09
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +2
Query: 146 VCYKCNRTGHFARECTQG-----GVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCY 310
VCY C + GH +R+C + G +GF + F F + + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 311 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 415
C G GH + EC + P C+NC + GH + CP
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 489
Score = 57.6 bits (133), Expect = 6e-09
Identities = 19/45 (42%), Positives = 30/45 (66%)
Frame = +2
Query: 368 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 502
+C+NC + GH + +CPE ++ + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 56.4 bits (130), Expect = 1e-08
Identities = 37/133 (27%), Positives = 53/133 (39%), Gaps = 15/133 (11%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGT- 325
C+ C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 425
Query: 326 ------------GHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNK 463
G A + + C+NC GH + CPE R C+NC +
Sbjct: 426 SGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNCGE 480
Query: 464 SGHISRNCPDGTK 502
GH S CP+ K
Sbjct: 481 QGHRSNECPNPAK 493
Score = 50.8 bits (116), Expect = 7e-07
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Frame = +2
Query: 263 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE----- 418
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 418
Query: 419 -------GGRDNSNQTCYNCNKSGHISRNCPDGTKTCYVCGQPGHISRDCDE 553
G N + + N G C+ C GH S +C E
Sbjct: 419 EGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 48.4 bits (110), Expect = 3e-06
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +2
Query: 263 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRDN 433
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304
Query: 434 SNQTCYNCNKSG 469
+ + SG
Sbjct: 305 EGRNGFTGGSSG 316
Score = 42.7 bits (96), Expect = 2e-04
Identities = 38/136 (27%), Positives = 52/136 (38%), Gaps = 27/136 (19%)
Frame = +2
Query: 233 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ--SPDE--------P 367
+ CF C + GH + DC KE R CY C GH +R+C + P E
Sbjct: 255 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTGGS 314
Query: 368 SCY---NCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDG---------TKTCY 511
S + N TG + G N+ ++ + G S G C+
Sbjct: 315 SGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNNNCF 374
Query: 512 VCGQPGHISRDCDEER 559
C QPGH S DC E +
Sbjct: 375 NCQQPGHRSNDCPEPK 390
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 464 SGHISRNCPDGTKTCYVCGQPGHISRDCDEER 559
SG ++ + C+ C QPGH S DC E +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPK 276
>U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical
protein F07E5.5 protein.
Length = 384
Score = 63.7 bits (148), Expect = 9e-11
Identities = 42/131 (32%), Positives = 56/131 (42%), Gaps = 12/131 (9%)
Frame = +2
Query: 197 GGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQ---SPDEP 367
G V DA +R K + R G +D K C+ C GH +C + S +
Sbjct: 197 GKVTVADAMLLVKRWKTRETRRIGR--QDQKITGSACFHCREPGHRLADCPKRNSSSSDG 254
Query: 368 SCYNCNKTGHIARNCPEGG-RDNSNQTCYNCNKSGHISRNC--------PDGTKTCYVCG 520
C+ C H C + G + TC+ C + GHISR+C PDG C VCG
Sbjct: 255 VCFKCGSMEHSIHECKKKGVKGFPYATCFVCKQVGHISRDCHQNVNGVYPDG-GCCNVCG 313
Query: 521 QPGHISRDCDE 553
H+ RDC E
Sbjct: 314 ANTHLRRDCPE 324
Score = 61.3 bits (142), Expect = 5e-10
Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
Frame = +2
Query: 131 KMSSSVCYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADR-- 304
K++ S C+ C GH +C + + D CFKC H +CK++ +
Sbjct: 225 KITGSACFHCREPGHRLADCPKRNSSSSDG-------VCFKCGSMEHSIHECKKKGVKGF 277
Query: 305 ----CYRCNGTGHIARECAQS-----PDEPSCYNCNKTGHIARNCPE 418
C+ C GHI+R+C Q+ PD C C H+ R+CPE
Sbjct: 278 PYATCFVCKQVGHISRDCHQNVNGVYPDGGCCNVCGANTHLRRDCPE 324
Score = 59.7 bits (138), Expect = 1e-09
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Frame = +2
Query: 368 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNC-PDGTK-----TCYVCGQPG 529
+C++C + GH +CP+ +S+ C+ C H C G K TC+VC Q G
Sbjct: 230 ACFHCREPGHRLADCPKRNSSSSDGVCFKCGSMEHSIHECKKKGVKGFPYATCFVCKQVG 289
Query: 530 HISRDCDEERN 562
HISRDC + N
Sbjct: 290 HISRDCHQNVN 300
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 44.8 bits (101), Expect = 4e-05
Identities = 38/140 (27%), Positives = 52/140 (37%), Gaps = 15/140 (10%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN--- 319
C C GH A G+C D N + C CN GH+ C C
Sbjct: 1827 CVPCECNGHSATCDPDTGICT-DCEHNTNGDHCEFCNE-GHYGNATNGSPYDCMACACPF 1884
Query: 320 -GTGHIARECAQSPDEPSCYNCN-KTGHIARNCPE------GGRDNSNQTCYNCNKSGHI 475
T + A+ C S +E CN K G+ C G S ++C C +G+
Sbjct: 1885 APTNNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNN 1943
Query: 476 ----SRNCPDGTKTCYVCGQ 523
SR+C + CY+C Q
Sbjct: 1944 NLTDSRSCHPNSGDCYLCEQ 1963
Score = 29.9 bits (64), Expect = 1.3
Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 9/123 (7%)
Frame = +2
Query: 167 TGHFARECT---QGGVCARDAGFNRQREKCFKCNRTGHFARD--CKEEADRCYRCNGTGH 331
T +FA+ C +G + + ++C +C +G F E C +CNG +
Sbjct: 1887 TNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRC-ASGFFGHPQISGESCSPC-QCNGNNN 1944
Query: 332 IARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRDNSNQTCYNCNKSGHISRNCPDGT 499
+ + P+ CY C N G +C G + + C +C S S+ C + +
Sbjct: 1945 LTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSCECSQCGSQYCDNKS 2004
Query: 500 KTC 508
C
Sbjct: 2005 GGC 2007
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 44.8 bits (101), Expect = 4e-05
Identities = 38/140 (27%), Positives = 52/140 (37%), Gaps = 15/140 (10%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN--- 319
C C GH A G+C D N + C CN GH+ C C
Sbjct: 1827 CVPCECNGHSATCDPDTGICT-DCEHNTNGDHCEFCNE-GHYGNATNGSPYDCMACACPF 1884
Query: 320 -GTGHIARECAQSPDEPSCYNCN-KTGHIARNCPE------GGRDNSNQTCYNCNKSGHI 475
T + A+ C S +E CN K G+ C G S ++C C +G+
Sbjct: 1885 APTNNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNN 1943
Query: 476 ----SRNCPDGTKTCYVCGQ 523
SR+C + CY+C Q
Sbjct: 1944 NLTDSRSCHPNSGDCYLCEQ 1963
Score = 29.9 bits (64), Expect = 1.3
Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 9/123 (7%)
Frame = +2
Query: 167 TGHFARECT---QGGVCARDAGFNRQREKCFKCNRTGHFARD--CKEEADRCYRCNGTGH 331
T +FA+ C +G + + ++C +C +G F E C +CNG +
Sbjct: 1887 TNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRC-ASGFFGHPQISGESCSPC-QCNGNNN 1944
Query: 332 IARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRDNSNQTCYNCNKSGHISRNCPDGT 499
+ + P+ CY C N G +C G + + C +C S S+ C + +
Sbjct: 1945 LTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSCECSQCGSQYCDNKS 2004
Query: 500 KTC 508
C
Sbjct: 2005 GGC 2007
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 44.8 bits (101), Expect = 4e-05
Identities = 38/140 (27%), Positives = 52/140 (37%), Gaps = 15/140 (10%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN--- 319
C C GH A G+C D N + C CN GH+ C C
Sbjct: 1827 CVPCECNGHSATCDPDTGICT-DCEHNTNGDHCEFCNE-GHYGNATNGSPYDCMACACPF 1884
Query: 320 -GTGHIARECAQSPDEPSCYNCN-KTGHIARNCPE------GGRDNSNQTCYNCNKSGHI 475
T + A+ C S +E CN K G+ C G S ++C C +G+
Sbjct: 1885 APTNNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNN 1943
Query: 476 ----SRNCPDGTKTCYVCGQ 523
SR+C + CY+C Q
Sbjct: 1944 NLTDSRSCHPNSGDCYLCEQ 1963
Score = 29.9 bits (64), Expect = 1.3
Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 9/123 (7%)
Frame = +2
Query: 167 TGHFARECT---QGGVCARDAGFNRQREKCFKCNRTGHFARD--CKEEADRCYRCNGTGH 331
T +FA+ C +G + + ++C +C +G F E C +CNG +
Sbjct: 1887 TNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRC-ASGFFGHPQISGESCSPC-QCNGNNN 1944
Query: 332 IARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRDNSNQTCYNCNKSGHISRNCPDGT 499
+ + P+ CY C N G +C G + + C +C S S+ C + +
Sbjct: 1945 LTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSCECSQCGSQYCDNKS 2004
Query: 500 KTC 508
C
Sbjct: 2005 GGC 2007
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 44.8 bits (101), Expect = 4e-05
Identities = 38/140 (27%), Positives = 52/140 (37%), Gaps = 15/140 (10%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN--- 319
C C GH A G+C D N + C CN GH+ C C
Sbjct: 1827 CVPCECNGHSATCDPDTGICT-DCEHNTNGDHCEFCNE-GHYGNATNGSPYDCMACACPF 1884
Query: 320 -GTGHIARECAQSPDEPSCYNCN-KTGHIARNCPE------GGRDNSNQTCYNCNKSGHI 475
T + A+ C S +E CN K G+ C G S ++C C +G+
Sbjct: 1885 APTNNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNN 1943
Query: 476 ----SRNCPDGTKTCYVCGQ 523
SR+C + CY+C Q
Sbjct: 1944 NLTDSRSCHPNSGDCYLCEQ 1963
Score = 29.9 bits (64), Expect = 1.3
Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 9/123 (7%)
Frame = +2
Query: 167 TGHFARECT---QGGVCARDAGFNRQREKCFKCNRTGHFARD--CKEEADRCYRCNGTGH 331
T +FA+ C +G + + ++C +C +G F E C +CNG +
Sbjct: 1887 TNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRC-ASGFFGHPQISGESCSPC-QCNGNNN 1944
Query: 332 IARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRDNSNQTCYNCNKSGHISRNCPDGT 499
+ + P+ CY C N G +C G + + C +C S S+ C + +
Sbjct: 1945 LTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSCECSQCGSQYCDNKS 2004
Query: 500 KTC 508
C
Sbjct: 2005 GGC 2007
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 44.0 bits (99), Expect = 8e-05
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +2
Query: 350 QSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSG-HISRNCPDGTKTCYVCGQP 526
Q+P + C +C + G C + +DN++Q C C +SG H++ + C+ C +
Sbjct: 625 QNPSD-RCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNRACFRCNEM 683
Query: 527 GHISRDCDEE 556
GHI+ +C ++
Sbjct: 684 GHIAWNCPKK 693
Score = 41.1 bits (92), Expect = 5e-04
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Frame = +2
Query: 239 EKCFKCNRTG-HF---ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 403
++C C + G H ++ K+ A +C C +G C + + +C+ CN+ GHIA
Sbjct: 629 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 687
Query: 404 RNCPEGGRDNSNQ 442
NCP+ + S +
Sbjct: 688 WNCPKKNENTSEK 700
Score = 40.7 bits (91), Expect = 7e-04
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +2
Query: 296 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKS 466
+DRC C G C++ S D S C C ++G +C + N+ C+ CN+
Sbjct: 628 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFK----LKNRACFRCNEM 683
Query: 467 GHISRNCP 490
GHI+ NCP
Sbjct: 684 GHIAWNCP 691
Score = 30.7 bits (66), Expect = 0.75
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 185 ECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEE 295
EC Q G F + CF+CN GH A +C ++
Sbjct: 658 ECQQSGWHMASC-FKLKNRACFRCNEMGHIAWNCPKK 693
Score = 27.9 bits (59), Expect = 5.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 131 KMSSSVCYKCNRTGHFAREC 190
K+ + C++CN GH A C
Sbjct: 671 KLKNRACFRCNEMGHIAWNC 690
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1
protein, isoforma protein.
Length = 2175
Score = 44.0 bits (99), Expect = 8e-05
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +2
Query: 350 QSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSG-HISRNCPDGTKTCYVCGQP 526
Q+P + C +C + G C + +DN++Q C C +SG H++ + C+ C +
Sbjct: 528 QNPSD-RCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNRACFRCNEM 586
Query: 527 GHISRDCDEE 556
GHI+ +C ++
Sbjct: 587 GHIAWNCPKK 596
Score = 41.1 bits (92), Expect = 5e-04
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Frame = +2
Query: 239 EKCFKCNRTG-HF---ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 403
++C C + G H ++ K+ A +C C +G C + + +C+ CN+ GHIA
Sbjct: 532 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 590
Query: 404 RNCPEGGRDNSNQ 442
NCP+ + S +
Sbjct: 591 WNCPKKNENTSEK 603
Score = 40.7 bits (91), Expect = 7e-04
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +2
Query: 296 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKS 466
+DRC C G C++ S D S C C ++G +C + N+ C+ CN+
Sbjct: 531 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFK----LKNRACFRCNEM 586
Query: 467 GHISRNCP 490
GHI+ NCP
Sbjct: 587 GHIAWNCP 594
Score = 30.7 bits (66), Expect = 0.75
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 185 ECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEE 295
EC Q G F + CF+CN GH A +C ++
Sbjct: 561 ECQQSGWHMASC-FKLKNRACFRCNEMGHIAWNCPKK 596
Score = 27.9 bits (59), Expect = 5.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 131 KMSSSVCYKCNRTGHFAREC 190
K+ + C++CN GH A C
Sbjct: 574 KLKNRACFRCNEMGHIAWNC 593
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1
protein, isoformb protein.
Length = 2186
Score = 44.0 bits (99), Expect = 8e-05
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +2
Query: 350 QSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSG-HISRNCPDGTKTCYVCGQP 526
Q+P + C +C + G C + +DN++Q C C +SG H++ + C+ C +
Sbjct: 539 QNPSD-RCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNRACFRCNEM 597
Query: 527 GHISRDCDEE 556
GHI+ +C ++
Sbjct: 598 GHIAWNCPKK 607
Score = 41.1 bits (92), Expect = 5e-04
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Frame = +2
Query: 239 EKCFKCNRTG-HF---ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 403
++C C + G H ++ K+ A +C C +G C + + +C+ CN+ GHIA
Sbjct: 543 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 601
Query: 404 RNCPEGGRDNSNQ 442
NCP+ + S +
Sbjct: 602 WNCPKKNENTSEK 614
Score = 40.7 bits (91), Expect = 7e-04
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +2
Query: 296 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKS 466
+DRC C G C++ S D S C C ++G +C + N+ C+ CN+
Sbjct: 542 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFK----LKNRACFRCNEM 597
Query: 467 GHISRNCP 490
GHI+ NCP
Sbjct: 598 GHIAWNCP 605
Score = 30.7 bits (66), Expect = 0.75
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 185 ECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEE 295
EC Q G F + CF+CN GH A +C ++
Sbjct: 572 ECQQSGWHMASC-FKLKNRACFRCNEMGHIAWNCPKK 607
Score = 27.9 bits (59), Expect = 5.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 131 KMSSSVCYKCNRTGHFAREC 190
K+ + C++CN GH A C
Sbjct: 585 KLKNRACFRCNEMGHIAWNC 604
>Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical
protein F11A10.8 protein.
Length = 302
Score = 41.9 bits (94), Expect = 3e-04
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 368 SCYNCNKTGHIARNCPE-GGRDNSNQTCYNCNKSGHISRNCPDGTKTCYVCGQPGHISRD 544
+C+NC++ GH A CP G+ NQ ++ I TCY CG+ GH +
Sbjct: 205 TCHNCHERGHKATTCPHLPGQTRQNQDHHHRVDLSLIPDKKNLSDVTCYKCGEKGHYANR 264
Query: 545 C 547
C
Sbjct: 265 C 265
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/74 (25%), Positives = 32/74 (43%)
Frame = +2
Query: 275 ARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYN 454
A+ +A C+ C+ GH A C P + N + + + ++ S+ TCY
Sbjct: 196 AKPTYSQAITCHNCHERGHKATTCPHLPGQTR-QNQDHHHRVDLSLIPDKKNLSDVTCYK 254
Query: 455 CNKSGHISRNCPDG 496
C + GH + C G
Sbjct: 255 CGEKGHYANRCHKG 268
Score = 31.9 bits (69), Expect = 0.32
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 134 MSSSVCYKCNRTGHFARECTQGGV 205
+S CYKC GH+A C +G +
Sbjct: 247 LSDVTCYKCGEKGHYANRCHKGAL 270
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 245 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARE 343
C+KC GH+A C + A + N T H+A E
Sbjct: 252 CYKCGEKGHYANRCHKGA-LAFLSN-TAHLAHE 282
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 41.9 bits (94), Expect = 3e-04
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 437 NQTCYNCNKSGHISRNCPDGTKTCYVCGQPGHISRDC 547
+ TC+NC K GH + C + C CG P H + +C
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANCGDPNHRANEC 237
Score = 38.3 bits (85), Expect = 0.004
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 245 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECA 349
CF C + GH A +C C C H A ECA
Sbjct: 204 CFNCKKYGHRATECSAPQRECANCGDPNHRANECA 238
Score = 33.9 bits (74), Expect = 0.080
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +2
Query: 368 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 502
+C+NC K GH A C R+ C NC H + C +K
Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANECASWSK 242
Score = 33.5 bits (73), Expect = 0.11
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +2
Query: 296 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 412
++ C+ C GH A EC S + C NC H A C
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANEC 237
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 140 SSVCYKCNRTGHFARECT-QGGVCARDAGFNRQREKCFKCNRTG 268
S+ C+ C + GH A EC+ CA N + +C ++ G
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANCGDPNHRANECASWSKNG 244
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 41.9 bits (94), Expect = 3e-04
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 437 NQTCYNCNKSGHISRNCPDGTKTCYVCGQPGHISRDC 547
+ TC+NC K GH + C + C CG P H + +C
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANCGDPNHRANEC 237
Score = 38.3 bits (85), Expect = 0.004
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 245 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECA 349
CF C + GH A +C C C H A ECA
Sbjct: 204 CFNCKKYGHRATECSAPQRECANCGDPNHRANECA 238
Score = 33.9 bits (74), Expect = 0.080
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +2
Query: 368 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 502
+C+NC K GH A C R+ C NC H + C +K
Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANECASWSK 242
Score = 33.5 bits (73), Expect = 0.11
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +2
Query: 296 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 412
++ C+ C GH A EC S + C NC H A C
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANEC 237
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 140 SSVCYKCNRTGHFARECT-QGGVCARDAGFNRQREKCFKCNRTG 268
S+ C+ C + GH A EC+ CA N + +C ++ G
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANCGDPNHRANECASWSKNG 244
>Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical
protein F02E9.2b protein.
Length = 196
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = +2
Query: 413 PEGGRDNSNQTCYNCNK-SGHISRNCPD---GTKTCYVCGQPGHISRDCDEER 559
P G + + C+ C K + H +++CP+ K CY CG H+S C E R
Sbjct: 102 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERR 154
Score = 35.1 bits (77), Expect = 0.035
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = +2
Query: 302 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGR 427
RC+RC H A+ C D CY C H++ CPE R
Sbjct: 112 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRR 155
Score = 31.1 bits (67), Expect = 0.57
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +2
Query: 242 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 352
+CF+C + H A+ C K +A CY C H++ C +
Sbjct: 112 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 152
>Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical
protein F02E9.2a protein.
Length = 227
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = +2
Query: 413 PEGGRDNSNQTCYNCNK-SGHISRNCPD---GTKTCYVCGQPGHISRDCDEER 559
P G + + C+ C K + H +++CP+ K CY CG H+S C E R
Sbjct: 133 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERR 185
Score = 35.1 bits (77), Expect = 0.035
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = +2
Query: 302 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGR 427
RC+RC H A+ C D CY C H++ CPE R
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRR 186
Score = 31.1 bits (67), Expect = 0.57
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +2
Query: 242 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 352
+CF+C + H A+ C K +A CY C H++ C +
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
>U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein.
Length = 227
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = +2
Query: 413 PEGGRDNSNQTCYNCNK-SGHISRNCPD---GTKTCYVCGQPGHISRDCDEER 559
P G + + C+ C K + H +++CP+ K CY CG H+S C E R
Sbjct: 133 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERR 185
Score = 35.1 bits (77), Expect = 0.035
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = +2
Query: 302 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGR 427
RC+RC H A+ C D CY C H++ CPE R
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRR 186
Score = 31.1 bits (67), Expect = 0.57
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +2
Query: 242 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 352
+CF+C + H A+ C K +A CY C H++ C +
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
>U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein.
Length = 227
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = +2
Query: 413 PEGGRDNSNQTCYNCNK-SGHISRNCPD---GTKTCYVCGQPGHISRDCDEER 559
P G + + C+ C K + H +++CP+ K CY CG H+S C E R
Sbjct: 133 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERR 185
Score = 35.1 bits (77), Expect = 0.035
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = +2
Query: 302 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGR 427
RC+RC H A+ C D CY C H++ CPE R
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRR 186
Score = 31.1 bits (67), Expect = 0.57
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +2
Query: 242 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 352
+CF+C + H A+ C K +A CY C H++ C +
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
>AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin related.
see also lmb-protein 1 protein.
Length = 1067
Score = 39.5 bits (88), Expect = 0.002
Identities = 33/112 (29%), Positives = 41/112 (36%), Gaps = 7/112 (6%)
Frame = +2
Query: 182 RECTQGGVCARDA-GFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSP 358
R C Q CA GF K C+ G DC +++ +C C G R+C Q
Sbjct: 825 RRCDQ---CAIGTYGFGPSGCKKCDCDAVGSLGNDCDKQSGQCV-CREKGIYGRQCNQCQ 880
Query: 359 DE----PSCYNCNKTGHIARNCPEGGRDNSNQTCYNCN--KSGHISRNCPDG 496
P C C H A C D S+ C C +GH C DG
Sbjct: 881 PGFWGFPECRTCQCNDH-ANIC-----DQSSGACIECRDLTTGHYCDRCQDG 926
>AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical
protein K08D12.3b protein.
Length = 42
Score = 39.1 bits (87), Expect = 0.002
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 434 SNQTCYNCNKSGHISRNCPDG 496
S++ CY C + GHISRNCP+G
Sbjct: 2 SDRNCYKCQQPGHISRNCPNG 22
Score = 37.1 bits (82), Expect = 0.009
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 368 SCYNCNKTGHIARNCPEGGRDNSNQ 442
+CY C + GHI+RNCP G D +
Sbjct: 5 NCYKCQQPGHISRNCPNGESDGGRR 29
Score = 33.1 bits (72), Expect = 0.14
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2
Query: 500 KTCYVCGQPGHISRDC 547
+ CY C QPGHISR+C
Sbjct: 4 RNCYKCQQPGHISRNC 19
Score = 31.9 bits (69), Expect = 0.32
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 134 MSSSVCYKCNRTGHFARECTQG 199
MS CYKC + GH +R C G
Sbjct: 1 MSDRNCYKCQQPGHISRNCPNG 22
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +2
Query: 245 CFKCNRTGHFARDCKE-EADRCYRCNGTGHI 334
C+KC + GH +R+C E+D R G G +
Sbjct: 6 CYKCQQPGHISRNCPNGESDGGRRGGGGGGV 36
Score = 27.5 bits (58), Expect = 7.0
Identities = 10/18 (55%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = +2
Query: 296 ADR-CYRCNGTGHIAREC 346
+DR CY+C GHI+R C
Sbjct: 2 SDRNCYKCQQPGHISRNC 19
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 38.3 bits (85), Expect = 0.004
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 371 CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNC 487
C NC H + CP+ + C NC GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 36.7 bits (81), Expect = 0.011
Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Frame = +2
Query: 446 CYNCNKSGHISRNCPDGTKT-----CYVCGQPGHISRDC 547
C NC H S CPD C CG GHIS+DC
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 35.9 bits (79), Expect = 0.020
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +2
Query: 266 GHFARDCKEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 421
G F + RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCK 289
C C H + EC DA + KC C GH ++DCK
Sbjct: 430 CSNCGSDEHKSWECP-------DAPNVTNQIKCTNCGAFGHISKDCK 469
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 38.3 bits (85), Expect = 0.004
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 371 CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNC 487
C NC H + CP+ + C NC GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 36.7 bits (81), Expect = 0.011
Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Frame = +2
Query: 446 CYNCNKSGHISRNCPDGTKT-----CYVCGQPGHISRDC 547
C NC H S CPD C CG GHIS+DC
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 35.9 bits (79), Expect = 0.020
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +2
Query: 266 GHFARDCKEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 421
G F + RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCK 289
C C H + EC DA + KC C GH ++DCK
Sbjct: 430 CSNCGSDEHKSWECP-------DAPNVTNQIKCTNCGAFGHISKDCK 469
>AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical
protein K02F6.1 protein.
Length = 783
Score = 34.7 bits (76), Expect = 0.046
Identities = 17/55 (30%), Positives = 22/55 (40%)
Frame = +2
Query: 305 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSG 469
CY+C GH++++C QS N KT H N E G N G
Sbjct: 313 CYKCKVVGHVSKDCPQSSTNSGVTN-RKTEHSEVNTLEVGSGRQTSPSLRLNVEG 366
Score = 31.5 bits (68), Expect = 0.43
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = +2
Query: 365 PSCYNCNKTGHIARNCPEGGRDN 433
P CY C GH++++CP+ ++
Sbjct: 311 PYCYKCKVVGHVSKDCPQSSTNS 333
Score = 29.1 bits (62), Expect = 2.3
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +2
Query: 446 CYNCNKSGHISRNCPDGT 499
CY C GH+S++CP +
Sbjct: 313 CYKCKVVGHVSKDCPQSS 330
Score = 27.5 bits (58), Expect = 7.0
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQ 196
CYKC GH +++C Q
Sbjct: 313 CYKCKVVGHVSKDCPQ 328
>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical protein
K10D2.3 protein.
Length = 1425
Score = 33.9 bits (74), Expect = 0.080
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 11/66 (16%)
Frame = +2
Query: 332 IARECAQ--SPDEPSCYNCNKTGHIARNCPEGG---------RDNSNQTCYNCNKSGHIS 478
+ R+C Q +P + C+ C++ GH +CP+ NS + Y N SG
Sbjct: 1342 LLRKCNQGSAPTDRQCHQCHRIGHFVESCPQRALAKEARKRFGSNSTNSSYRSNDSGRGF 1401
Query: 479 RNCPDG 496
+N +G
Sbjct: 1402 KNGEEG 1407
Score = 32.3 bits (70), Expect = 0.25
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVC--ARDAGFNRQREKCFKCNRTGHFARDCKEEADR 304
C++C+R GHF C Q + AR + ++ N +G ++ +E DR
Sbjct: 1357 CHQCHRIGHFVESCPQRALAKEARKRFGSNSTNSSYRSNDSGRGFKNGEEGGDR 1410
Score = 31.5 bits (68), Expect = 0.43
Identities = 26/81 (32%), Positives = 34/81 (41%)
Frame = +2
Query: 182 RECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPD 361
R+C QG A +RQ C +C+R GHF C + A AR+ S
Sbjct: 1344 RKCNQGS-----APTDRQ---CHQCHRIGHFVESCPQRA--------LAKEARKRFGSNS 1387
Query: 362 EPSCYNCNKTGHIARNCPEGG 424
S Y N +G +N EGG
Sbjct: 1388 TNSSYRSNDSGRGFKNGEEGG 1408
>Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 33.5 bits (73), Expect = 0.11
Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Frame = +2
Query: 284 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRDNSNQTCYNCN 460
C+E+ D C + C S D +C + C+ I + P SNQ+ Y C+
Sbjct: 66 CREQFDDIKACK------KSCVASDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 461 KSGHISRNCPDGTKTC 508
+ CP+ K C
Sbjct: 120 ALCQMDGECPETQKCC 135
>Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 33.5 bits (73), Expect = 0.11
Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Frame = +2
Query: 284 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRDNSNQTCYNCN 460
C+E+ D C + C S D +C + C+ I + P SNQ+ Y C+
Sbjct: 66 CREQFDDIKACK------KSCVASDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 461 KSGHISRNCPDGTKTC 508
+ CP+ K C
Sbjct: 120 ALCQMDGECPETQKCC 135
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 33.5 bits (73), Expect = 0.11
Identities = 36/133 (27%), Positives = 52/133 (39%), Gaps = 23/133 (17%)
Frame = +2
Query: 170 GHFARECTQGGVCARDAGFNRQR-----------EKCFKCNRTGHFARDCKEEADRCYRC 316
G F R C Q C A +R+ E C K +GH+ C EE C
Sbjct: 1161 GQFGRNCAQRCNCKNGASCDRKTGRCECLPGWSGEHCEKSCVSGHYGAKC-EETCECENG 1219
Query: 317 NGTGHIARECAQSPDEPSCYNCNK---TGHIARNCPEGGRDNSNQTC------YNCNK-- 463
I+ C+ P CN+ G+ R+C + R ++++C C K
Sbjct: 1220 ALCDPISGHCSCQPGWRG-KKCNRPCLKGYFGRHCSQSCRCANSKSCDHISGRCQCPKGY 1278
Query: 464 SGH-ISRNCPDGT 499
+GH + CPDGT
Sbjct: 1279 AGHSCTELCPDGT 1291
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 33.5 bits (73), Expect = 0.11
Identities = 36/133 (27%), Positives = 52/133 (39%), Gaps = 23/133 (17%)
Frame = +2
Query: 170 GHFARECTQGGVCARDAGFNRQR-----------EKCFKCNRTGHFARDCKEEADRCYRC 316
G F R C Q C A +R+ E C K +GH+ C EE C
Sbjct: 1161 GQFGRNCAQRCNCKNGASCDRKTGRCECLPGWSGEHCEKSCVSGHYGAKC-EETCECENG 1219
Query: 317 NGTGHIARECAQSPDEPSCYNCNK---TGHIARNCPEGGRDNSNQTC------YNCNK-- 463
I+ C+ P CN+ G+ R+C + R ++++C C K
Sbjct: 1220 ALCDPISGHCSCQPGWRG-KKCNRPCLKGYFGRHCSQSCRCANSKSCDHISGRCQCPKGY 1278
Query: 464 SGH-ISRNCPDGT 499
+GH + CPDGT
Sbjct: 1279 AGHSCTELCPDGT 1291
>L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform a
protein.
Length = 456
Score = 32.7 bits (71), Expect = 0.19
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +2
Query: 305 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRN 484
C +C+GT + + SC CN TG +++ +GG TC C SGH ++N
Sbjct: 191 CLKCHGT-----QVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243
>L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform b
protein.
Length = 446
Score = 32.7 bits (71), Expect = 0.19
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +2
Query: 305 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRN 484
C +C+GT + + SC CN TG +++ +GG TC C SGH ++N
Sbjct: 191 CLKCHGT-----QVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243
>AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical
protein R52.2 protein.
Length = 1019
Score = 31.9 bits (69), Expect = 0.32
Identities = 20/65 (30%), Positives = 23/65 (35%), Gaps = 2/65 (3%)
Frame = +2
Query: 143 SVCYKCNRTGHFAR--ECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRC 316
S C C+ T H R EC R+ CF C R+GH C C C
Sbjct: 312 SPCIFCSSTSHVHRHEECPIFNTAEARIQKAREIGLCFGCLRSGHQRSKCSRPR-TCNHC 370
Query: 317 NGTGH 331
G H
Sbjct: 371 KGNHH 375
>AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein.
Length = 700
Score = 31.5 bits (68), Expect = 0.43
Identities = 19/76 (25%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = +2
Query: 284 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRDNSNQTCYNCN 460
C+E+ D C + C D +C + C+ I + P SNQ+ Y C+
Sbjct: 66 CREQFDDIKACK------KSCVPRDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 461 KSGHISRNCPDGTKTC 508
+ CP+ K C
Sbjct: 120 ALCQMDGECPETQKCC 135
>Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical
protein F02A9.6 protein.
Length = 1295
Score = 31.1 bits (67), Expect = 0.57
Identities = 31/136 (22%), Positives = 50/136 (36%), Gaps = 2/136 (1%)
Frame = +2
Query: 152 YKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGH 331
Y C G+ A + Q +C + GF QR + + G D + C R NGT +
Sbjct: 278 YVCQNDGYCAHDSNQMPICYCEQGFTGQRCEIECPSGFGGIHCDLPLQRPHCSRSNGTCY 337
Query: 332 IARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISR-NCPDGTKTC 508
C C C + +I C +D +C + ++ C D +
Sbjct: 338 NDGRCING----FCV-C-EPDYIGDRCEINRKDFKFPDIQSCKYNPCVNNATCIDLKNSG 391
Query: 509 YVCGQP-GHISRDCDE 553
Y C P G +C++
Sbjct: 392 YSCHCPLGFYGLNCEQ 407
>Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical
protein F02A9.6 protein.
Length = 1295
Score = 31.1 bits (67), Expect = 0.57
Identities = 31/136 (22%), Positives = 50/136 (36%), Gaps = 2/136 (1%)
Frame = +2
Query: 152 YKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGH 331
Y C G+ A + Q +C + GF QR + + G D + C R NGT +
Sbjct: 278 YVCQNDGYCAHDSNQMPICYCEQGFTGQRCEIECPSGFGGIHCDLPLQRPHCSRSNGTCY 337
Query: 332 IARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISR-NCPDGTKTC 508
C C C + +I C +D +C + ++ C D +
Sbjct: 338 NDGRCING----FCV-C-EPDYIGDRCEINRKDFKFPDIQSCKYNPCVNNATCIDLKNSG 391
Query: 509 YVCGQP-GHISRDCDE 553
Y C P G +C++
Sbjct: 392 YSCHCPLGFYGLNCEQ 407
>M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein (
C.elegans glp-1 gene,complete cds. ).
Length = 1295
Score = 31.1 bits (67), Expect = 0.57
Identities = 31/136 (22%), Positives = 50/136 (36%), Gaps = 2/136 (1%)
Frame = +2
Query: 152 YKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGH 331
Y C G+ A + Q +C + GF QR + + G D + C R NGT +
Sbjct: 278 YVCQNDGYCAHDSNQMPICYCEQGFTGQRCEIECPSGFGGIHCDLPLQRPHCSRSNGTCY 337
Query: 332 IARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISR-NCPDGTKTC 508
C C C + +I C +D +C + ++ C D +
Sbjct: 338 NDGRCING----FCV-C-EPDYIGDRCEINRKDFKFPDIQSCKYNPCVNNATCIDLKNSG 391
Query: 509 YVCGQP-GHISRDCDE 553
Y C P G +C++
Sbjct: 392 YSCHCPLGFYGLNCEQ 407
>Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical
protein C27B7.5 protein.
Length = 386
Score = 30.7 bits (66), Expect = 0.75
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +2
Query: 353 SPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCP 490
SP + +K R GR C++C + GHISR CP
Sbjct: 140 SPRSDGMGSSSKRPRSGRRTGRRGRGGPGH-CFHCQEHGHISRMCP 184
Score = 28.3 bits (60), Expect = 4.0
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 371 CYNCNKTGHIARNCPE 418
C++C + GHI+R CP+
Sbjct: 170 CFHCQEHGHISRMCPK 185
>U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical
protein C28H8.9a protein.
Length = 372
Score = 30.7 bits (66), Expect = 0.75
Identities = 22/77 (28%), Positives = 33/77 (42%)
Frame = +2
Query: 290 EEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSG 469
E + C C+GT + + D SC++C ++GH P N N T +SG
Sbjct: 252 EISTSCDFCSGTAFMNKNTKLPEDLVSCHDCGRSGH-----PSCLNFNQNVTKI-IKRSG 305
Query: 470 HISRNCPDGTKTCYVCG 520
C K+C +CG
Sbjct: 306 WQCLEC----KSCTICG 318
>AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical
protein F54G2.2 protein.
Length = 1023
Score = 30.7 bits (66), Expect = 0.75
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = +2
Query: 356 PDEPSCYNCNKTGHIARNC---PEGG-RDNSNQTCYNCNKSGHISRNCP 490
P+ C C + G +C P+ R+ C+ C + GHIS CP
Sbjct: 576 PENGICAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCP 624
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/55 (23%), Positives = 23/55 (41%)
Frame = +2
Query: 140 SSVCYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADR 304
+ +C +C + G C+ + + R +CF C GH + C + DR
Sbjct: 578 NGICAECKQVGGHEPSCS---LAPKTWKRERPPPQCFTCGEMGHISTYCPKRIDR 629
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 7/45 (15%)
Frame = +2
Query: 305 CYRCNGTGHIARECAQSPDE-------PSCYNCNKTGHIARNCPE 418
C C G C+ +P P C+ C + GHI+ CP+
Sbjct: 581 CAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCPK 625
Score = 27.5 bits (58), Expect = 7.0
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 9/46 (19%)
Frame = +2
Query: 437 NQTCYNCNKSGHISRNCPDGTKT---------CYVCGQPGHISRDC 547
N C C + G +C KT C+ CG+ GHIS C
Sbjct: 578 NGICAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYC 623
>U62281-1|AAD09363.1| 925|Caenorhabditis elegans lipoprotein
receptor precursor protein.
Length = 925
Score = 30.3 bits (65), Expect = 0.99
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Frame = +2
Query: 293 EADRCYRCNGTGHIARECAQSPDEPS-CYNCNKTGHIARNCPEGGRDNSNQTCYNC--NK 463
+AD + C+ G + C + E C N T + + CP G D+ ++ C C +
Sbjct: 253 QADHMHSCSAAGMYS--CGRKGSEIGVCIPMNATCNGIKECPLG--DDESKHCSECARKR 308
Query: 464 SGHISRNCPDGTKTCYVCGQPGHISRD---CDEE 556
H N P G + C +C + ++ D C++E
Sbjct: 309 CDHTCMNTPHGAR-C-ICQEGYKLADDGLTCEDE 340
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 30.3 bits (65), Expect = 0.99
Identities = 27/100 (27%), Positives = 35/100 (35%), Gaps = 2/100 (2%)
Frame = +2
Query: 128 SKMSSSVCYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRC 307
SK S +CNR G F C + G C G KC C + + A C
Sbjct: 663 SKTSFPDSCQCNRVGSFGHTCDETGQCKCRPGV--AGIKCDHCLPSFWGIHLIAQGALSC 720
Query: 308 --YRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEG 421
C+ G +C Q+ + C N G CP G
Sbjct: 721 RPCGCSAFGSSRSDCEQTTGKCECKN-GALGDKCDLCPNG 759
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/75 (22%), Positives = 29/75 (38%)
Frame = +2
Query: 239 EKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 418
E C NR+G + D + D C + + D C C K+ H++ + +
Sbjct: 60 ENCMDVNRSGTMSLDMARQCDMSSSCGSCQRMI-----TADSRQCTTCRKSYHLSCDSSD 114
Query: 419 GGRDNSNQTCYNCNK 463
N N C +C +
Sbjct: 115 VSSLN-NFVCISCRR 128
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/75 (22%), Positives = 29/75 (38%)
Frame = +2
Query: 239 EKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 418
E C NR+G + D + D C + + D C C K+ H++ + +
Sbjct: 60 ENCMDVNRSGTMSLDMARQCDMSSSCGSCQRMI-----TADSRQCTTCRKSYHLSCDSSD 114
Query: 419 GGRDNSNQTCYNCNK 463
N N C +C +
Sbjct: 115 VSSLN-NFVCISCRR 128
>Z81071-6|CAB03010.1| 464|Caenorhabditis elegans Hypothetical
protein F28F8.7 protein.
Length = 464
Score = 29.5 bits (63), Expect = 1.7
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 446 CYNCNKSGHISRNCPDGTKTCYVC 517
C NCNK+ PD TK C +C
Sbjct: 302 CQNCNKALKYYDPIPDDTKLCLIC 325
>U62639-1|AAD09364.1| 925|Caenorhabditis elegans lr protein.
Length = 925
Score = 29.5 bits (63), Expect = 1.7
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Frame = +2
Query: 293 EADRCYRCNGTGHIARECAQSPDEPS-CYNCNKTGHIARNCPEGGRDNSNQTCYNC--NK 463
+AD + C+ G + C E C N T + + CP G D+ ++ C C +
Sbjct: 253 QADHMHSCSAAGMYS--CGTKGSEIGVCIPMNATCNGIKECPLG--DDESKHCSECARKR 308
Query: 464 SGHISRNCPDGTKTCYVCGQPGHISRD---CDEE 556
H N P G + C +C + ++ D C++E
Sbjct: 309 CDHTCMNTPHGAR-C-ICQEGYKLADDGLTCEDE 340
>AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical
protein Y51H4A.26 protein.
Length = 107
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = +2
Query: 275 ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGH----IARNCPE 418
A+ C+ D + Y+ GH R+C D P Y C K G I +NCP+
Sbjct: 37 AKKCENYFDCQQYQTCIFGHCVRKCTSERDCPLGYICFKNGDGQRCIKKNCPK 89
>AF185706-1|AAD56241.1| 925|Caenorhabditis elegans yolk receptor
RME-2 protein.
Length = 925
Score = 29.5 bits (63), Expect = 1.7
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Frame = +2
Query: 293 EADRCYRCNGTGHIARECAQSPDEPS-CYNCNKTGHIARNCPEGGRDNSNQTCYNC--NK 463
+AD + C+ G + C E C N T + + CP G D+ ++ C C +
Sbjct: 253 QADHMHSCSAAGMYS--CGTKGSEIGVCIPMNATCNGIKECPLG--DDESKHCSECARKR 308
Query: 464 SGHISRNCPDGTKTCYVCGQPGHISRD---CDEE 556
H N P G + C +C + ++ D C++E
Sbjct: 309 CDHTCMNTPHGAR-C-ICQEGYKLADDGLTCEDE 340
>AF036703-1|AAB88554.3| 925|Caenorhabditis elegans Receptor
mediated endocytosis protein2 protein.
Length = 925
Score = 29.5 bits (63), Expect = 1.7
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Frame = +2
Query: 293 EADRCYRCNGTGHIARECAQSPDEPS-CYNCNKTGHIARNCPEGGRDNSNQTCYNC--NK 463
+AD + C+ G + C E C N T + + CP G D+ ++ C C +
Sbjct: 253 QADHMHSCSAAGMYS--CGTKGSEIGVCIPMNATCNGIKECPLG--DDESKHCSECARKR 308
Query: 464 SGHISRNCPDGTKTCYVCGQPGHISRD---CDEE 556
H N P G + C +C + ++ D C++E
Sbjct: 309 CDHTCMNTPHGAR-C-ICQEGYKLADDGLTCEDE 340
>AC084159-15|AAK39353.1| 418|Caenorhabditis elegans Hypothetical
protein Y73B3A.13 protein.
Length = 418
Score = 29.5 bits (63), Expect = 1.7
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 446 CYNCNKSGHISRNCPDGTKTCYVC 517
C NCNK+ PD TK C +C
Sbjct: 281 CQNCNKALKYYDPIPDDTKLCLIC 304
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 29.1 bits (62), Expect = 2.3
Identities = 24/91 (26%), Positives = 32/91 (35%), Gaps = 2/91 (2%)
Frame = +2
Query: 155 KCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRC--YRCNGTG 328
+CNR G F C + G C G KC C + + A C C+ G
Sbjct: 739 QCNRVGSFGHTCDETGQCKCRPGV--AGIKCDHCLPSFWGIHLIAQGALSCRPCGCSAFG 796
Query: 329 HIARECAQSPDEPSCYNCNKTGHIARNCPEG 421
+C Q+ + C N G CP G
Sbjct: 797 SSRSDCEQTTGKCECKN-GALGDKCDLCPNG 826
>U28741-4|AAA68328.1| 747|Caenorhabditis elegans Hypothetical
protein F35D2.4 protein.
Length = 747
Score = 29.1 bits (62), Expect = 2.3
Identities = 22/69 (31%), Positives = 28/69 (40%), Gaps = 9/69 (13%)
Frame = +2
Query: 206 CARDAGFNRQREKCFKCNRTGHFARD-----CKEEADRCYRCNGTGHIARECAQ----SP 358
C R FNR +C C T + D C + +R NG EC + SP
Sbjct: 5 CTRLQYFNRIELRCEICPNTTIPSDDMMSCKCSKNQIEIFR-NGFVPTCEECPEGTLSSP 63
Query: 359 DEPSCYNCN 385
D+ C NCN
Sbjct: 64 DQTGCLNCN 72
>U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile
(unfertilizable) protein2 protein.
Length = 548
Score = 29.1 bits (62), Expect = 2.3
Identities = 28/114 (24%), Positives = 41/114 (35%)
Frame = +2
Query: 206 CARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN 385
C++D + C + DC+ E+D CN A +C ++ C +
Sbjct: 216 CSKDQFKCSGSDACLPISVKCDGVSDCENESDES-NCNKCQKGAHKCGKN-----CIKAS 269
Query: 386 KTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTKTCYVCGQPGHISRDC 547
K +C +G D C C SG C DG TC + Q DC
Sbjct: 270 KVCDGIPDCDDGS-DEHQCDCKTC--SGSEKALCEDG--TCIMRSQVCDGKHDC 318
>AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical
protein F49F1.8 protein.
Length = 615
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 230 RQREKCFKCNRTGHFARDCKEEA 298
R + +C C GH AR+CK++A
Sbjct: 571 RFKGQCHYCKNVGHMARNCKKKA 593
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/36 (27%), Positives = 14/36 (38%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKC 256
C+ C GH AR C + + G+ Q C
Sbjct: 576 CHYCKNVGHMARNCKKKAFAEKRKGYEDQARSITSC 611
Score = 27.1 bits (57), Expect = 9.2
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +2
Query: 371 CYNCNKTGHIARNC 412
C+ C GH+ARNC
Sbjct: 576 CHYCKNVGHMARNC 589
>AF016439-2|AAB65897.1| 176|Caenorhabditis elegans Hypothetical
protein R02F11.1 protein.
Length = 176
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = +2
Query: 371 CYNCNKTGHIARN-CPEGGRDNSNQTCYNCNKSGHISRNCPDGT-KTCYVCG 520
C + N TG CP G N+N C SG + +C +G T Y CG
Sbjct: 115 CQSGNSTGPCVNQVCPTGFMCNTNNYCCPLG-SGGVLGSCVNGVCPTGYTCG 165
>AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical
protein Y48G1BM.5 protein.
Length = 994
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 410 CPEGGRDNSNQTCYNCNKSGHISRNCPDGTKTCYVCGQPGHISRDC 547
CP +D+ QTC + + R C + + C +C P HI+ +C
Sbjct: 925 CPPCKKDHPLQTC--TMGAIEVKRFCINNGR-CTICSSPSHITGNC 967
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 28.3 bits (60), Expect = 4.0
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +2
Query: 305 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCY-NCNKSGHISR 481
C T +CA + DE Y CN R+CPE +N+ C + K HI
Sbjct: 2805 CILLGATCDSKPDCADASDENPNY-CN-----TRSCPEDYNLCTNRRCIDSAKKCNHID- 2857
Query: 482 NCPDGT 499
+C DG+
Sbjct: 2858 DCGDGS 2863
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 28.3 bits (60), Expect = 4.0
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +2
Query: 305 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCY-NCNKSGHISR 481
C T +CA + DE Y CN R+CPE +N+ C + K HI
Sbjct: 2805 CILLGATCDSKPDCADASDENPNY-CN-----TRSCPEDYNLCTNRRCIDSAKKCNHID- 2857
Query: 482 NCPDGT 499
+C DG+
Sbjct: 2858 DCGDGS 2863
>Z81496-9|CAB04065.1| 153|Caenorhabditis elegans Hypothetical
protein F09C6.10 protein.
Length = 153
Score = 27.9 bits (59), Expect = 5.3
Identities = 17/77 (22%), Positives = 27/77 (35%)
Frame = +2
Query: 314 CNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPD 493
C + E P +P C N+ + C G + T CN+ +I N
Sbjct: 36 CQSKCGVPLEIRMKPTKPGCKKWNECDDNEKQCASGPKLQIIYTNNVCNQFVNICENREY 95
Query: 494 GTKTCYVCGQPGHISRD 544
CG P +S++
Sbjct: 96 ANWNMQKCGIPHVVSKN 112
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.9 bits (59), Expect = 5.3
Identities = 34/127 (26%), Positives = 47/127 (37%), Gaps = 15/127 (11%)
Frame = +2
Query: 173 HFAREC---TQGGV---CARDAGFNRQREKCF--KCNRTGHFARDCKEEADRCYRCNGTG 328
H + C TQG V C+ + G +E +C+R D + C CN TG
Sbjct: 936 HTCKPCGCHTQGAVNPQCSEENGECECKENYIGAQCDRCKENHGDVENGCPAC-DCNDTG 994
Query: 329 HIARECAQSPDEPSCYNCNKTGHIARNCPE------GGRDNSNQTCYNCNKSGHI-SRNC 487
I +C Q + +C K G + C + D Q C+ CN G I C
Sbjct: 995 SIGSDCDQVSGQCNC----KQGVFGKQCDQCRPSYFNFTDAGCQFCH-CNIYGSIEDGKC 1049
Query: 488 PDGTKTC 508
T C
Sbjct: 1050 DQTTGKC 1056
Score = 27.5 bits (58), Expect = 7.0
Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 11/108 (10%)
Frame = +2
Query: 206 CARDA-GFNRQREK--CFKCNRTGHFARDCKEEADRCYRCNGTGHIAREC------AQSP 358
CA + GFN +R K ++ + H+ +E+A R C+ G ++ C A++
Sbjct: 390 CAHNTEGFNCERCKDGYYRPSGLSHY----REDACRTCECDPVGSVSDACVRDDQSAENG 445
Query: 359 DEPSCYNCNKT--GHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDG 496
+P C G C G R++ CN++G ++ + DG
Sbjct: 446 QKPGDCICKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFDTCDG 493
>AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical
protein Y38H6C.5 protein.
Length = 915
Score = 27.9 bits (59), Expect = 5.3
Identities = 17/75 (22%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN-GT 325
CY C + GH A EC + D N +R+ + + R + D Y + T
Sbjct: 411 CYYCGKRGHTANECRRK---KSDESQNGERQDPSQSEQIAALRRQLAMQNDDPYSSDEST 467
Query: 326 GHIARECAQSPDEPS 370
++ C + ++P+
Sbjct: 468 EALSLSCQKPKEDPT 482
Score = 27.1 bits (57), Expect = 9.2
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 368 SCYNCNKTGHIARNCPEGGRDNS 436
+CY C K GH A C D S
Sbjct: 410 NCYYCGKRGHTANECRRKKSDES 432
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.9 bits (59), Expect = 5.3
Identities = 34/127 (26%), Positives = 47/127 (37%), Gaps = 15/127 (11%)
Frame = +2
Query: 173 HFAREC---TQGGV---CARDAGFNRQREKCF--KCNRTGHFARDCKEEADRCYRCNGTG 328
H + C TQG V C+ + G +E +C+R D + C CN TG
Sbjct: 936 HTCKPCGCHTQGAVNPQCSEENGECECKENYIGAQCDRCKENHGDVENGCPAC-DCNDTG 994
Query: 329 HIARECAQSPDEPSCYNCNKTGHIARNCPE------GGRDNSNQTCYNCNKSGHI-SRNC 487
I +C Q + +C K G + C + D Q C+ CN G I C
Sbjct: 995 SIGSDCDQVSGQCNC----KQGVFGKQCDQCRPSYFNFTDAGCQFCH-CNIYGSIEDGKC 1049
Query: 488 PDGTKTC 508
T C
Sbjct: 1050 DQTTGKC 1056
Score = 27.5 bits (58), Expect = 7.0
Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 11/108 (10%)
Frame = +2
Query: 206 CARDA-GFNRQREK--CFKCNRTGHFARDCKEEADRCYRCNGTGHIAREC------AQSP 358
CA + GFN +R K ++ + H+ +E+A R C+ G ++ C A++
Sbjct: 390 CAHNTEGFNCERCKDGYYRPSGLSHY----REDACRTCECDPVGSVSDACVRDDQSAENG 445
Query: 359 DEPSCYNCNKT--GHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDG 496
+P C G C G R++ CN++G ++ + DG
Sbjct: 446 QKPGDCICKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFDTCDG 493
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 27.9 bits (59), Expect = 5.3
Identities = 34/127 (26%), Positives = 47/127 (37%), Gaps = 15/127 (11%)
Frame = +2
Query: 173 HFAREC---TQGGV---CARDAGFNRQREKCF--KCNRTGHFARDCKEEADRCYRCNGTG 328
H + C TQG V C+ + G +E +C+R D + C CN TG
Sbjct: 936 HTCKPCGCHTQGAVNPQCSEENGECECKENYIGAQCDRCKENHGDVENGCPAC-DCNDTG 994
Query: 329 HIARECAQSPDEPSCYNCNKTGHIARNCPE------GGRDNSNQTCYNCNKSGHI-SRNC 487
I +C Q + +C K G + C + D Q C+ CN G I C
Sbjct: 995 SIGSDCDQVSGQCNC----KQGVFGKQCDQCRPSYFNFTDAGCQFCH-CNIYGSIEDGKC 1049
Query: 488 PDGTKTC 508
T C
Sbjct: 1050 DQTTGKC 1056
Score = 27.5 bits (58), Expect = 7.0
Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 11/108 (10%)
Frame = +2
Query: 206 CARDA-GFNRQREK--CFKCNRTGHFARDCKEEADRCYRCNGTGHIAREC------AQSP 358
CA + GFN +R K ++ + H+ +E+A R C+ G ++ C A++
Sbjct: 390 CAHNTEGFNCERCKDGYYRPSGLSHY----REDACRTCECDPVGSVSDACVRDDQSAENG 445
Query: 359 DEPSCYNCNKT--GHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDG 496
+P C G C G R++ CN++G ++ + DG
Sbjct: 446 QKPGDCICKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFDTCDG 493
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical
protein H02I12.1 protein.
Length = 1319
Score = 27.5 bits (58), Expect = 7.0
Identities = 28/114 (24%), Positives = 44/114 (38%), Gaps = 10/114 (8%)
Frame = +2
Query: 188 CTQGGV----CARDAGFNRQ----REKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARE 343
C GG C FN + RE C + + A E+ + Y +G IA +
Sbjct: 118 CVAGGAYMAKCPDSLVFNERTQDCRESCDEVKQDTTTAPQVYEDGEEGYG-EASGEIAGD 176
Query: 344 CAQSP--DEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGT 499
+ P ++P + + G N +G N Y+C+ + R CP GT
Sbjct: 177 YERQPSNEQPDSIDFDCNGLEDGNYADG----CNDVFYSCSNNMVFQRYCPPGT 226
>Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical
protein F36F2.3b protein.
Length = 363
Score = 27.5 bits (58), Expect = 7.0
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 488 PDGTKTCYVCGQPGHISRDC 547
P T TC C QPGH ++C
Sbjct: 152 PPPTYTCNRCSQPGHWYKNC 171
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 27.5 bits (58), Expect = 7.0
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 488 PDGTKTCYVCGQPGHISRDC 547
P T TC C QPGH ++C
Sbjct: 152 PPPTYTCNRCSQPGHWYKNC 171
>Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 27.5 bits (58), Expect = 7.0
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = +2
Query: 203 VCARDAGFNRQREKCFKCNRTGHFARDC-KEEADRCYRCNG 322
VC DAG + C C + + DC KE D C G
Sbjct: 675 VCTDDAGTAHIVDDCTSCVCSAEGSADCYKEACDESLECRG 715
>Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 27.5 bits (58), Expect = 7.0
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = +2
Query: 203 VCARDAGFNRQREKCFKCNRTGHFARDC-KEEADRCYRCNG 322
VC DAG + C C + + DC KE D C G
Sbjct: 609 VCTDDAGTAHIVDDCTSCVCSAEGSADCYKEACDESLECRG 649
>Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 27.5 bits (58), Expect = 7.0
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = +2
Query: 203 VCARDAGFNRQREKCFKCNRTGHFARDC-KEEADRCYRCNG 322
VC DAG + C C + + DC KE D C G
Sbjct: 675 VCTDDAGTAHIVDDCTSCVCSAEGSADCYKEACDESLECRG 715
>Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 27.5 bits (58), Expect = 7.0
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = +2
Query: 203 VCARDAGFNRQREKCFKCNRTGHFARDC-KEEADRCYRCNG 322
VC DAG + C C + + DC KE D C G
Sbjct: 609 VCTDDAGTAHIVDDCTSCVCSAEGSADCYKEACDESLECRG 649
>Z54281-2|CAA91045.3| 399|Caenorhabditis elegans Hypothetical
protein F46C5.3 protein.
Length = 399
Score = 27.5 bits (58), Expect = 7.0
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +2
Query: 371 CYN-CNKTGHIARNCPEGGRDNSNQTCYNCN 460
CY+ C G +A NC GG N N C CN
Sbjct: 236 CYDSCRNAGQLA-NCANGGIPNPN-NCQVCN 264
>U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical
protein C17H11.6c protein.
Length = 778
Score = 27.5 bits (58), Expect = 7.0
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +2
Query: 488 PD-GTKTCYVCGQPGHISRDCDEER 559
PD GT CY C + H ++ CDE R
Sbjct: 198 PDCGTLFCYHCKREWHSNQTCDEAR 222
>U80847-6|AAK68190.1| 796|Caenorhabditis elegans Hypothetical
protein C17H11.6b protein.
Length = 796
Score = 27.5 bits (58), Expect = 7.0
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +2
Query: 488 PD-GTKTCYVCGQPGHISRDCDEER 559
PD GT CY C + H ++ CDE R
Sbjct: 198 PDCGTLFCYHCKREWHSNQTCDEAR 222
>U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical
protein C17H11.6a protein.
Length = 793
Score = 27.5 bits (58), Expect = 7.0
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +2
Query: 488 PD-GTKTCYVCGQPGHISRDCDEER 559
PD GT CY C + H ++ CDE R
Sbjct: 198 PDCGTLFCYHCKREWHSNQTCDEAR 222
>U28971-1|AAA68376.2| 551|Caenorhabditis elegans Egg sterile
(unfertilizable) protein1 protein.
Length = 551
Score = 27.5 bits (58), Expect = 7.0
Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 11/82 (13%)
Frame = +2
Query: 341 ECAQSPDEPSCYNCNKTGH-IARNCPEGGR---------DNSNQTCYNCNK-SGHISRNC 487
+CA + DE +C C H + C + D S++ +C + SG C
Sbjct: 241 DCADASDEKNCSKCQNNAHKCGKQCIKASHVCDGVAQCADGSDEQQCDCQRCSGTDKALC 300
Query: 488 PDGTKTCYVCGQPGHISRDCDE 553
DG TC + Q +DC +
Sbjct: 301 DDG--TCIMRTQVCDGKKDCTD 320
>AL132895-2|CAC14404.1| 613|Caenorhabditis elegans Hypothetical
protein Y59A8A.2 protein.
Length = 613
Score = 27.5 bits (58), Expect = 7.0
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = +2
Query: 311 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE----GGRDNSNQTCYNCNKS 466
+ N T + R+ + + C C+K+ HI P R+N C+ CN+S
Sbjct: 524 KMNYTCVVCRKSTEQHKQTQCDECHKSYHIGCLSPPLTRLPKRNNFGWICHECNES 579
>AL117193-10|CAB60304.1| 337|Caenorhabditis elegans Hypothetical
protein Y105C5A.17 protein.
Length = 337
Score = 27.5 bits (58), Expect = 7.0
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = +2
Query: 422 GRDNSNQTCYNCNKSGHISRNCPDGTKTCYVCGQPGHI 535
GRDNSN+ + C + S C VC G++
Sbjct: 189 GRDNSNEEWHGCGTTDCTSAGCKKNADGSNVCCCQGYL 226
>AL110498-7|CAB57909.2| 302|Caenorhabditis elegans Hypothetical
protein Y64G10A.1 protein.
Length = 302
Score = 27.5 bits (58), Expect = 7.0
Identities = 36/139 (25%), Positives = 44/139 (31%), Gaps = 12/139 (8%)
Frame = +2
Query: 167 TGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGT------G 328
TG E T GVCA G C G C E CN G
Sbjct: 25 TGGIWSEWTSTGVCATTCGACSNLNYTRTCLSDGLKNCACVGEPTTTMLCNTIACNYPRG 84
Query: 329 HIARECAQSPDEPS----CYNCNKTGHIARNCPEGG--RDNSNQTCYNCNKSGHISRNCP 490
A C SP E + C N K+ R CP GG + S+ + +R C
Sbjct: 85 SEAPCCNGSPVEINNFFHCTNATKSAPAKRCCPTGGVWTEWSSWGKSRDKIEWNRTRKCL 144
Query: 491 DGTKTCYVCGQPGHISRDC 547
G C G+ +C
Sbjct: 145 SGGYNCACVGESEQTKFEC 163
>AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 27.5 bits (58), Expect = 7.0
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = +2
Query: 203 VCARDAGFNRQREKCFKCNRTGHFARDC-KEEADRCYRCNG 322
VC DAG + C C + + DC KE D C G
Sbjct: 609 VCTDDAGTAHIVDDCTSCVCSAEGSADCYKEACDESLECRG 649
>AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 27.5 bits (58), Expect = 7.0
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = +2
Query: 203 VCARDAGFNRQREKCFKCNRTGHFARDC-KEEADRCYRCNG 322
VC DAG + C C + + DC KE D C G
Sbjct: 609 VCTDDAGTAHIVDDCTSCVCSAEGSADCYKEACDESLECRG 649
>U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily
assigned gene nameprotein 162 protein.
Length = 2643
Score = 27.1 bits (57), Expect = 9.2
Identities = 25/96 (26%), Positives = 37/96 (38%), Gaps = 2/96 (2%)
Frame = +2
Query: 281 DCKEEADRCYRCNGTGHIARE--CAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYN 454
DC++ +D C T + E C P Y C+ R P G RD S++
Sbjct: 66 DCQDSSDEPSTCKRTC-LENEFVCKTGKCLPRGYLCDSQYDCGR-LPNGDRDLSDEAPEL 123
Query: 455 CNKSGHISRNCPDGTKTCYVCGQPGHISRDCDEERN 562
CN+ H C C Q + + CD +R+
Sbjct: 124 CNQPLH----CDYNEYACSKSAQCVPLFKFCDGKRD 155
>U80955-3|AAM97944.1| 95|Caenorhabditis elegans Mlp/crp family
(muscle lim protein/cysteine-rich protein) protein 1,
isoform a protein.
Length = 95
Score = 27.1 bits (57), Expect = 9.2
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Frame = +2
Query: 233 QREKCFKCNRTGHFARDCKEEADR----CYRCNGTGHIARECAQSPDEPSCYNCNKTGHI 400
+ KC KC ++ + A + + C++CN + C +P E Y C K H
Sbjct: 7 EHPKCPKCGKSVYAAEEMSAGGYKWHKFCFKCNMCNKLLDSCTVAPHEAELY-C-KQCHG 64
Query: 401 ARNCPEG 421
+ P+G
Sbjct: 65 RKFGPKG 71
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/43 (25%), Positives = 19/43 (44%)
Frame = +2
Query: 359 DEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNC 487
+ P C C K+ + A GG ++ C+ CN + +C
Sbjct: 7 EHPKCPKCGKSVYAAEEMSAGGY-KWHKFCFKCNMCNKLLDSC 48
>U80955-1|AAM97945.1| 113|Caenorhabditis elegans Mlp/crp family
(muscle lim protein/cysteine-rich protein) protein 1,
isoform b protein.
Length = 113
Score = 27.1 bits (57), Expect = 9.2
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Frame = +2
Query: 233 QREKCFKCNRTGHFARDCKEEADR----CYRCNGTGHIARECAQSPDEPSCYNCNKTGHI 400
+ KC KC ++ + A + + C++CN + C +P E Y C K H
Sbjct: 7 EHPKCPKCGKSVYAAEEMSAGGYKWHKFCFKCNMCNKLLDSCTVAPHEAELY-C-KQCHG 64
Query: 401 ARNCPEG 421
+ P+G
Sbjct: 65 RKFGPKG 71
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/43 (25%), Positives = 19/43 (44%)
Frame = +2
Query: 359 DEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNC 487
+ P C C K+ + A GG ++ C+ CN + +C
Sbjct: 7 EHPKCPKCGKSVYAAEEMSAGGY-KWHKFCFKCNMCNKLLDSC 48
>AF039047-12|AAM15590.1| 226|Caenorhabditis elegans Hypothetical
protein K11D12.12 protein.
Length = 226
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 463 VRAHLAQLPRRHQDLLRLRAARTYLSRLRRGAE 561
+R H A+ R+H+D+ RL + +RR AE
Sbjct: 178 IRQHEAEEKRQHRDVKRLAIEHGNMDEIRRKAE 210
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,990,767
Number of Sequences: 27780
Number of extensions: 241936
Number of successful extensions: 1364
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1177
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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