Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_I09
         (435 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   2.6  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   2.6  
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              21   4.5  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       21   6.0  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +1

Query: 49  THLNIPTLSYTILI*N 96
           THLN    SYTI+I N
Sbjct: 476 THLNHADFSYTIVINN 491


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 9/35 (25%), Positives = 15/35 (42%)
 Frame = -1

Query: 141 ARSALCRRNVVWSSLVSNQYRIR*GRDI*MCVHAR 37
           A+  +      W      QY+IR  +D+  C+  R
Sbjct: 596 AKKYVAGEQCCWHCFNCTQYQIRDHKDVTQCISCR 630


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +3

Query: 174 FDKYEKNVIDFMDTLKIKLGFV 239
           FDK ++ +  ++D +  K+GFV
Sbjct: 52  FDKNDEKLACYVDCMLKKVGFV 73


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 8/32 (25%), Positives = 16/32 (50%)
 Frame = +3

Query: 153 VKTGCDTFDKYEKNVIDFMDTLKIKLGFVQYL 248
           +  GC         ++DF++  ++K   VQ+L
Sbjct: 320 LSAGCHILVATPGRLLDFVEKGRVKFSSVQFL 351


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,691
Number of Sequences: 438
Number of extensions: 2350
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11368164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)