Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_I08
         (534 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M29536-1|AAA52383.1|  333|Homo sapiens EIF2 protein.                   62   1e-09
CR456734-1|CAG33015.1|  333|Homo sapiens EIF2S2 protein.               62   1e-09
BT009795-1|AAP88797.1|  333|Homo sapiens eukaryotic translation ...    62   1e-09
BC007888-1|AAH07888.1|  214|Homo sapiens EIF2S2 protein protein.       62   1e-09
BC000934-1|AAH00934.1|  333|Homo sapiens eukaryotic translation ...    62   1e-09
BC000461-1|AAH00461.1|  333|Homo sapiens eukaryotic translation ...    62   1e-09
AL031668-7|CAB43741.1|  333|Homo sapiens eukaryotic translation ...    62   1e-09

>M29536-1|AAA52383.1|  333|Homo sapiens EIF2 protein.
          Length = 333

 Score = 62.1 bits (144), Expect = 1e-09
 Identities = 28/32 (87%), Positives = 30/32 (93%)
 Frame = -1

Query: 534 LQCETCGSRCSVASIKSGFQAVTGKRAAIRAK 439
           LQCETC SRCSVASIK+GFQAVTGKRA +RAK
Sbjct: 300 LQCETCHSRCSVASIKTGFQAVTGKRAQLRAK 331


>CR456734-1|CAG33015.1|  333|Homo sapiens EIF2S2 protein.
          Length = 333

 Score = 62.1 bits (144), Expect = 1e-09
 Identities = 28/32 (87%), Positives = 30/32 (93%)
 Frame = -1

Query: 534 LQCETCGSRCSVASIKSGFQAVTGKRAAIRAK 439
           LQCETC SRCSVASIK+GFQAVTGKRA +RAK
Sbjct: 300 LQCETCHSRCSVASIKTGFQAVTGKRAQLRAK 331


>BT009795-1|AAP88797.1|  333|Homo sapiens eukaryotic translation
           initiation factor 2, subunit 2 beta, 38kDa protein.
          Length = 333

 Score = 62.1 bits (144), Expect = 1e-09
 Identities = 28/32 (87%), Positives = 30/32 (93%)
 Frame = -1

Query: 534 LQCETCGSRCSVASIKSGFQAVTGKRAAIRAK 439
           LQCETC SRCSVASIK+GFQAVTGKRA +RAK
Sbjct: 300 LQCETCHSRCSVASIKTGFQAVTGKRAQLRAK 331


>BC007888-1|AAH07888.1|  214|Homo sapiens EIF2S2 protein protein.
          Length = 214

 Score = 62.1 bits (144), Expect = 1e-09
 Identities = 28/32 (87%), Positives = 30/32 (93%)
 Frame = -1

Query: 534 LQCETCGSRCSVASIKSGFQAVTGKRAAIRAK 439
           LQCETC SRCSVASIK+GFQAVTGKRA +RAK
Sbjct: 181 LQCETCHSRCSVASIKTGFQAVTGKRAQLRAK 212


>BC000934-1|AAH00934.1|  333|Homo sapiens eukaryotic translation
           initiation factor 2, subunit 2 beta, 38kDa protein.
          Length = 333

 Score = 62.1 bits (144), Expect = 1e-09
 Identities = 28/32 (87%), Positives = 30/32 (93%)
 Frame = -1

Query: 534 LQCETCGSRCSVASIKSGFQAVTGKRAAIRAK 439
           LQCETC SRCSVASIK+GFQAVTGKRA +RAK
Sbjct: 300 LQCETCHSRCSVASIKTGFQAVTGKRAQLRAK 331


>BC000461-1|AAH00461.1|  333|Homo sapiens eukaryotic translation
           initiation factor 2, subunit 2 beta, 38kDa protein.
          Length = 333

 Score = 62.1 bits (144), Expect = 1e-09
 Identities = 28/32 (87%), Positives = 30/32 (93%)
 Frame = -1

Query: 534 LQCETCGSRCSVASIKSGFQAVTGKRAAIRAK 439
           LQCETC SRCSVASIK+GFQAVTGKRA +RAK
Sbjct: 300 LQCETCHSRCSVASIKTGFQAVTGKRAQLRAK 331


>AL031668-7|CAB43741.1|  333|Homo sapiens eukaryotic translation
           initiation factor 2, subunit 2 beta, 38kDa protein.
          Length = 333

 Score = 62.1 bits (144), Expect = 1e-09
 Identities = 28/32 (87%), Positives = 30/32 (93%)
 Frame = -1

Query: 534 LQCETCGSRCSVASIKSGFQAVTGKRAAIRAK 439
           LQCETC SRCSVASIK+GFQAVTGKRA +RAK
Sbjct: 300 LQCETCHSRCSVASIKTGFQAVTGKRAQLRAK 331


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,256,315
Number of Sequences: 237096
Number of extensions: 1118222
Number of successful extensions: 2632
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2632
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5216942984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)