Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_I03
(494 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051705-1|AAK93129.1| 787|Drosophila melanogaster LD24561p pro... 271 4e-73
AJ252018-1|CAB93521.1| 787|Drosophila melanogaster mitochondria... 271 4e-73
AE014134-3353|AAF53973.2| 787|Drosophila melanogaster CG9244-PB... 271 4e-73
AY089241-1|AAL89979.1| 783|Drosophila melanogaster AT02886p pro... 269 2e-72
AE014297-1239|AAF54588.2| 783|Drosophila melanogaster CG4706-PA... 269 2e-72
AJ223247-1|CAA11211.1| 902|Drosophila melanogaster iron regulat... 60 2e-09
AY058657-1|AAL13886.1| 902|Drosophila melanogaster LD36161p pro... 59 3e-09
AJ252016-1|CAB93519.1| 902|Drosophila melanogaster iron regulat... 59 3e-09
AE014297-3221|AAF56051.1| 902|Drosophila melanogaster CG4900-PA... 59 3e-09
AY113650-1|AAM29655.1| 899|Drosophila melanogaster SD12606p pro... 57 1e-08
AJ252017-1|CAB93520.1| 899|Drosophila melanogaster iron regulat... 57 1e-08
AE014297-1148|AAF54529.1| 899|Drosophila melanogaster CG6342-PA... 57 1e-08
AJ223248-1|CAA11212.1| 899|Drosophila melanogaster iron regulat... 54 8e-08
AF220354-1|AAF32356.1| 1931|Drosophila melanogaster mitotic kine... 29 3.5
AE014134-2054|AAF53089.2| 1931|Drosophila melanogaster CG33694-P... 29 3.5
AE014298-290|AAF45689.2| 158|Drosophila melanogaster CG32801-PA... 29 4.6
X98881-1|CAA67384.1| 865|Drosophila melanogaster nuclear hormon... 28 6.0
X73045-1|CAA51523.1| 113|Drosophila melanogaster DR-78 protein. 28 6.0
U01087-1|AAA19975.1| 864|Drosophila melanogaster nuclear hormon... 28 6.0
AY058553-1|AAL13782.1| 1222|Drosophila melanogaster LD24737p pro... 28 6.0
AF238308-1|AAF69494.1| 866|Drosophila melanogaster nuclear rece... 28 6.0
AE014298-2010|AAF48351.2| 1222|Drosophila melanogaster CG32604-P... 28 6.0
AE014296-3498|AAF51692.2| 862|Drosophila melanogaster CG18023-P... 28 6.0
AY061327-1|AAL28875.1| 719|Drosophila melanogaster LD24749p pro... 28 8.0
AJ243916-1|CAB51032.1| 719|Drosophila melanogaster DOMINA prote... 28 8.0
AJ243814-1|CAB51073.1| 719|Drosophila melanogaster DOMINA prote... 28 8.0
AF264033-1|AAF91395.1| 719|Drosophila melanogaster winged-helix... 28 8.0
AE014297-1143|AAF54525.1| 719|Drosophila melanogaster CG4029-PA... 28 8.0
AB028890-1|BAA94598.1| 719|Drosophila melanogaster Winged-helix... 28 8.0
>AY051705-1|AAK93129.1| 787|Drosophila melanogaster LD24561p protein.
Length = 787
Score = 271 bits (664), Expect = 4e-73
Identities = 128/164 (78%), Positives = 139/164 (84%)
Frame = +3
Query: 3 TRHISAAGPWLKYRGHLDNISNNMFITATNAENGELNKVRNQLTGEFGPVPGTARAYKAA 182
T HISAAGPWLKYRGHLDNISNNMFI ATN EN E+N ++NQ G +G VP AR YKA
Sbjct: 602 TDHISAAGPWLKYRGHLDNISNNMFIGATNYENNEMNNIKNQRNGSWGGVPDVARDYKAN 661
Query: 183 GVRWCVVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGVLPLTFANAA 362
G++W VGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQG+LPLTFAN A
Sbjct: 662 GIKWVAVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGLLPLTFANPA 721
Query: 363 DYDKIQPSDKISLLGLKDLAPGKQVDCQIKHKDGSVETIKLNHS 494
DYDKIQP+ KISLL LK LAPGK VD +IK+ D VE IKLNH+
Sbjct: 722 DYDKIQPTSKISLLNLKSLAPGKPVDAEIKNGD-KVERIKLNHT 764
>AJ252018-1|CAB93521.1| 787|Drosophila melanogaster mitochondrial
aconitase protein.
Length = 787
Score = 271 bits (664), Expect = 4e-73
Identities = 128/164 (78%), Positives = 139/164 (84%)
Frame = +3
Query: 3 TRHISAAGPWLKYRGHLDNISNNMFITATNAENGELNKVRNQLTGEFGPVPGTARAYKAA 182
T HISAAGPWLKYRGHLDNISNNMFI ATN EN E+N ++NQ G +G VP AR YKA
Sbjct: 602 TDHISAAGPWLKYRGHLDNISNNMFIGATNYENNEMNNIKNQRNGSWGGVPDVARDYKAN 661
Query: 183 GVRWCVVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGVLPLTFANAA 362
G++W VGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQG+LPLTFAN A
Sbjct: 662 GIKWVAVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGLLPLTFANPA 721
Query: 363 DYDKIQPSDKISLLGLKDLAPGKQVDCQIKHKDGSVETIKLNHS 494
DYDKIQP+ KISLL LK LAPGK VD +IK+ D VE IKLNH+
Sbjct: 722 DYDKIQPTSKISLLNLKSLAPGKPVDAEIKNGD-KVERIKLNHT 764
>AE014134-3353|AAF53973.2| 787|Drosophila melanogaster CG9244-PB
protein.
Length = 787
Score = 271 bits (664), Expect = 4e-73
Identities = 128/164 (78%), Positives = 139/164 (84%)
Frame = +3
Query: 3 TRHISAAGPWLKYRGHLDNISNNMFITATNAENGELNKVRNQLTGEFGPVPGTARAYKAA 182
T HISAAGPWLKYRGHLDNISNNMFI ATN EN E+N ++NQ G +G VP AR YKA
Sbjct: 602 TDHISAAGPWLKYRGHLDNISNNMFIGATNYENNEMNNIKNQRNGSWGGVPDVARDYKAN 661
Query: 183 GVRWCVVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGVLPLTFANAA 362
G++W VGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQG+LPLTFAN A
Sbjct: 662 GIKWVAVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGLLPLTFANPA 721
Query: 363 DYDKIQPSDKISLLGLKDLAPGKQVDCQIKHKDGSVETIKLNHS 494
DYDKIQP+ KISLL LK LAPGK VD +IK+ D VE IKLNH+
Sbjct: 722 DYDKIQPTSKISLLNLKSLAPGKPVDAEIKNGD-KVERIKLNHT 764
>AY089241-1|AAL89979.1| 783|Drosophila melanogaster AT02886p protein.
Length = 783
Score = 269 bits (659), Expect = 2e-72
Identities = 126/164 (76%), Positives = 140/164 (85%)
Frame = +3
Query: 3 TRHISAAGPWLKYRGHLDNISNNMFITATNAENGELNKVRNQLTGEFGPVPGTARAYKAA 182
T HISAAGPWLKYRGHLDNISNNMFI ATNAEN E+NKV+NQ TG F VP AR YKA
Sbjct: 592 TDHISAAGPWLKYRGHLDNISNNMFIGATNAENNEMNKVKNQKTGSFDAVPAVARDYKAN 651
Query: 183 GVRWCVVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGVLPLTFANAA 362
++WC VG+ENYGEGSSREHAALEPRHLGG AIIVKSFARIHETNLKKQG+L LTFAN
Sbjct: 652 KIKWCAVGEENYGEGSSREHAALEPRHLGGVAIIVKSFARIHETNLKKQGMLALTFANPG 711
Query: 363 DYDKIQPSDKISLLGLKDLAPGKQVDCQIKHKDGSVETIKLNHS 494
DYDK+QPS KIS+L LKDLAPGK VD +IK+ +GS + I+LNH+
Sbjct: 712 DYDKVQPSSKISILNLKDLAPGKPVDAEIKN-NGSSDKIQLNHT 754
>AE014297-1239|AAF54588.2| 783|Drosophila melanogaster CG4706-PA
protein.
Length = 783
Score = 269 bits (659), Expect = 2e-72
Identities = 126/164 (76%), Positives = 140/164 (85%)
Frame = +3
Query: 3 TRHISAAGPWLKYRGHLDNISNNMFITATNAENGELNKVRNQLTGEFGPVPGTARAYKAA 182
T HISAAGPWLKYRGHLDNISNNMFI ATNAEN E+NKV+NQ TG F VP AR YKA
Sbjct: 592 TDHISAAGPWLKYRGHLDNISNNMFIGATNAENNEMNKVKNQKTGSFDAVPAVARDYKAN 651
Query: 183 GVRWCVVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGVLPLTFANAA 362
++WC VG+ENYGEGSSREHAALEPRHLGG AIIVKSFARIHETNLKKQG+L LTFAN
Sbjct: 652 KIKWCAVGEENYGEGSSREHAALEPRHLGGVAIIVKSFARIHETNLKKQGMLALTFANPG 711
Query: 363 DYDKIQPSDKISLLGLKDLAPGKQVDCQIKHKDGSVETIKLNHS 494
DYDK+QPS KIS+L LKDLAPGK VD +IK+ +GS + I+LNH+
Sbjct: 712 DYDKVQPSSKISILNLKDLAPGKPVDAEIKN-NGSSDKIQLNHT 754
>AJ223247-1|CAA11211.1| 902|Drosophila melanogaster iron regulatory
protein-1A protein.
Length = 902
Score = 59.7 bits (138), Expect = 2e-09
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Frame = +3
Query: 132 TGEFGPVPGTARAYKAAGVRWCVVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHE 311
+GE V A Y + G +V ++YG GSSR+ AA P LG +A+I +S+ RIH
Sbjct: 759 SGEEMDVFDAAERYASEGTPLVLVVGKDYGSGSSRDWAAKGPFLLGIKAVIAESYERIHR 818
Query: 312 TNLKKQGVLPLTF--ANAADYDKIQPSDKISL-LGLKDLAPGKQV 437
+NL G++PL F +AD K+ + ++ L +L PG+++
Sbjct: 819 SNLVGMGIIPLQFLPGQSADTLKLSGREVYNIVLPEGELKPGQRI 863
>AY058657-1|AAL13886.1| 902|Drosophila melanogaster LD36161p protein.
Length = 902
Score = 59.3 bits (137), Expect = 3e-09
Identities = 36/105 (34%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Frame = +3
Query: 132 TGEFGPVPGTARAYKAAGVRWCVVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHE 311
+GE + A Y + G +V ++YG GSSR+ AA P LG +A+I +S+ RIH
Sbjct: 759 SGEEMDIFDAAERYASEGTPLVLVVGKDYGSGSSRDWAAKGPFLLGIKAVIAESYERIHR 818
Query: 312 TNLKKQGVLPLTF--ANAADYDKIQPSDKISL-LGLKDLAPGKQV 437
+NL G++PL F +AD K+ + ++ L +L PG+++
Sbjct: 819 SNLVGMGIIPLQFLPGQSADTLKLSGREVYNIVLPEGELKPGQRI 863
>AJ252016-1|CAB93519.1| 902|Drosophila melanogaster iron regulatory
protein 1A protein.
Length = 902
Score = 59.3 bits (137), Expect = 3e-09
Identities = 36/105 (34%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Frame = +3
Query: 132 TGEFGPVPGTARAYKAAGVRWCVVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHE 311
+GE + A Y + G +V ++YG GSSR+ AA P LG +A+I +S+ RIH
Sbjct: 759 SGEEMDIFDAAERYASEGTPLVLVVGKDYGSGSSRDWAAKGPFLLGIKAVIAESYERIHR 818
Query: 312 TNLKKQGVLPLTF--ANAADYDKIQPSDKISL-LGLKDLAPGKQV 437
+NL G++PL F +AD K+ + ++ L +L PG+++
Sbjct: 819 SNLVGMGIIPLQFLPGQSADTLKLSGREVYNIVLPEGELKPGQRI 863
>AE014297-3221|AAF56051.1| 902|Drosophila melanogaster CG4900-PA
protein.
Length = 902
Score = 59.3 bits (137), Expect = 3e-09
Identities = 36/105 (34%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Frame = +3
Query: 132 TGEFGPVPGTARAYKAAGVRWCVVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHE 311
+GE + A Y + G +V ++YG GSSR+ AA P LG +A+I +S+ RIH
Sbjct: 759 SGEEMDIFDAAERYASEGTPLVLVVGKDYGSGSSRDWAAKGPFLLGIKAVIAESYERIHR 818
Query: 312 TNLKKQGVLPLTF--ANAADYDKIQPSDKISL-LGLKDLAPGKQV 437
+NL G++PL F +AD K+ + ++ L +L PG+++
Sbjct: 819 SNLVGMGIIPLQFLPGQSADTLKLSGREVYNIVLPEGELKPGQRI 863
>AY113650-1|AAM29655.1| 899|Drosophila melanogaster SD12606p protein.
Length = 899
Score = 57.2 bits (132), Expect = 1e-08
Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
Frame = +3
Query: 162 ARAYKAAGVRWCVVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGVLP 341
A Y+ G +V ++YG GSSR+ AA P LG +A+I +S+ RIH +NL G++P
Sbjct: 766 AERYREEGTPLVLVVGKDYGSGSSRDWAAKGPFLLGVKAVIAESYERIHRSNLVGMGIIP 825
Query: 342 LTFANAADYDKIQPSDK-ISLLGLKD--LAPGKQVDCQIKHKDGSV-ETI 479
L F + + + + + + L + L PG+++ + DG+V ETI
Sbjct: 826 LQFLPGQSAETLNLTGREVYNIALPESGLKPGQKIQVE---ADGTVFETI 872
>AJ252017-1|CAB93520.1| 899|Drosophila melanogaster iron regulatory
protein 1B protein.
Length = 899
Score = 57.2 bits (132), Expect = 1e-08
Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
Frame = +3
Query: 162 ARAYKAAGVRWCVVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGVLP 341
A Y+ G +V ++YG GSSR+ AA P LG +A+I +S+ RIH +NL G++P
Sbjct: 766 AERYREEGTPLVLVVGKDYGSGSSRDWAAKGPFLLGVKAVIAESYERIHRSNLVGMGIIP 825
Query: 342 LTFANAADYDKIQPSDK-ISLLGLKD--LAPGKQVDCQIKHKDGSV-ETI 479
L F + + + + + + L + L PG+++ + DG+V ETI
Sbjct: 826 LQFLPGQSAETLNLTGREVYNIALPESGLKPGQKIQVE---ADGTVFETI 872
>AE014297-1148|AAF54529.1| 899|Drosophila melanogaster CG6342-PA
protein.
Length = 899
Score = 57.2 bits (132), Expect = 1e-08
Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
Frame = +3
Query: 162 ARAYKAAGVRWCVVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGVLP 341
A Y+ G +V ++YG GSSR+ AA P LG +A+I +S+ RIH +NL G++P
Sbjct: 766 AERYREEGTPLVLVVGKDYGSGSSRDWAAKGPFLLGVKAVIAESYERIHRSNLVGMGIIP 825
Query: 342 LTFANAADYDKIQPSDK-ISLLGLKD--LAPGKQVDCQIKHKDGSV-ETI 479
L F + + + + + + L + L PG+++ + DG+V ETI
Sbjct: 826 LQFLPGQSAETLNLTGREVYNIALPESGLKPGQKIQVE---ADGTVFETI 872
>AJ223248-1|CAA11212.1| 899|Drosophila melanogaster iron regulatory
protein-1B protein.
Length = 899
Score = 54.4 bits (125), Expect = 8e-08
Identities = 35/110 (31%), Positives = 60/110 (54%), Gaps = 4/110 (3%)
Frame = +3
Query: 162 ARAYKAAGVRWCVVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGVLP 341
A Y+ G +V ++YG GSSR+ AA P LG +A+I +S+ RIH +N+ G++P
Sbjct: 766 AERYREEGTPLVLVVGKDYGSGSSRDWAAKGPFLLGVKAVIAESYERIHRSNMVGMGIIP 825
Query: 342 LTFANAADYDKIQPSDK-ISLLGLKD--LAPGKQVDCQIKHKDGSV-ETI 479
F + + + + + + L + L PG+++ + DG+V ETI
Sbjct: 826 XQFLPGQSAETLNLTGREVYNIALPESGLKPGQKIQVE---ADGTVFETI 872
>AF220354-1|AAF32356.1| 1931|Drosophila melanogaster mitotic
kinesin-like motor proteinCENP-ana protein.
Length = 1931
Score = 29.1 bits (62), Expect = 3.5
Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 198 VVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETN-LKKQGVLPLTFANAADYDK 374
VVG+ N E SSR HA II++S H N KQ VL L + A ++
Sbjct: 184 VVGETNMNERSSRSHAIFR--------IIIESRKSDHSDNDTVKQSVLSL--VDLAGSEQ 233
Query: 375 IQPSDKISLL 404
+ P+D S L
Sbjct: 234 VDPADHASSL 243
>AE014134-2054|AAF53089.2| 1931|Drosophila melanogaster CG33694-PA,
isoform A protein.
Length = 1931
Score = 29.1 bits (62), Expect = 3.5
Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 198 VVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETN-LKKQGVLPLTFANAADYDK 374
VVG+ N E SSR HA II++S H N KQ VL L + A ++
Sbjct: 184 VVGETNMNERSSRSHAIFR--------IIIESRKSDHSDNDTVKQSVLSL--VDLAGSEQ 233
Query: 375 IQPSDKISLL 404
+ P+D S L
Sbjct: 234 VDPADHASSL 243
>AE014298-290|AAF45689.2| 158|Drosophila melanogaster CG32801-PA
protein.
Length = 158
Score = 28.7 bits (61), Expect = 4.6
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Frame = +3
Query: 207 DENYGEGSSREHAALEPRHLG---GRAIIVKS--FARIHETNLKKQGVLPLTFANAADYD 371
DE G + +H +PR L + +I +S R++ET + V PLT A Y+
Sbjct: 9 DEVEENGDALDHREGDPRPLPYDFEKELIHRSNRHIRLYETFVPVSQVHPLTRKFYAQYE 68
Query: 372 KIQPSDKISLLGLKDLAPGKQVDCQ 446
+ QP+D +L L+ P K V+ Q
Sbjct: 69 QRQPTD--TLRYLRHTWPEKHVERQ 91
>X98881-1|CAA67384.1| 865|Drosophila melanogaster nuclear hormone
receptor protein.
Length = 865
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 66 WRCYRDAPCI*ARVQRPRCASC 1
+RC RD C+ R+ R RC C
Sbjct: 401 YRCLRDGKCLVIRLNRNRCQYC 422
>X73045-1|CAA51523.1| 113|Drosophila melanogaster DR-78 protein.
Length = 113
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 66 WRCYRDAPCI*ARVQRPRCASC 1
+RC RD C+ R+ R RC C
Sbjct: 81 YRCLRDGKCLVIRLNRNRCQYC 102
>U01087-1|AAA19975.1| 864|Drosophila melanogaster nuclear hormone
receptor superfamilyprotein protein.
Length = 864
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 66 WRCYRDAPCI*ARVQRPRCASC 1
+RC RD C+ R+ R RC C
Sbjct: 401 YRCLRDGKCLVIRLNRNRCQYC 422
>AY058553-1|AAL13782.1| 1222|Drosophila melanogaster LD24737p
protein.
Length = 1222
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +3
Query: 225 GSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGVLPLTFANAADYDKIQPSDK 392
G REH P H GG + + R H +K+G + T A D D+ D+
Sbjct: 111 GQLREHKDDTPSHTGGVSEKARERLREHIQRDRKRGPVSSTAAEGRDRDRDWDRDR 166
>AF238308-1|AAF69494.1| 866|Drosophila melanogaster nuclear
receptor E78A protein.
Length = 866
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 66 WRCYRDAPCI*ARVQRPRCASC 1
+RC RD C+ R+ R RC C
Sbjct: 401 YRCLRDGKCLVIRLNRNRCQYC 422
>AE014298-2010|AAF48351.2| 1222|Drosophila melanogaster CG32604-PA,
isoform A protein.
Length = 1222
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +3
Query: 225 GSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGVLPLTFANAADYDKIQPSDK 392
G REH P H GG + + R H +K+G + T A D D+ D+
Sbjct: 111 GQLREHKDDTPSHTGGVSEKARERLREHIQRDRKRGPVSSTAAEGRDRDRDWDRDR 166
>AE014296-3498|AAF51692.2| 862|Drosophila melanogaster CG18023-PA,
isoform A protein.
Length = 862
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 66 WRCYRDAPCI*ARVQRPRCASC 1
+RC RD C+ R+ R RC C
Sbjct: 397 YRCLRDGKCLVIRLNRNRCQYC 418
>AY061327-1|AAL28875.1| 719|Drosophila melanogaster LD24749p
protein.
Length = 719
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 297 ARIHETNLKK--QGVLPLTFANAADYDKIQPSDKISLLGLKDLAPGKQVDCQIKHKDGS 467
A + TN K G+ LTFAN+A Y K++ + + G ++PG + +K +D +
Sbjct: 270 ASVGATNTIKLAPGIGGLTFANSAAYQKLKQTSLVKSPG--GISPGAGSNMGLKREDSN 326
>AJ243916-1|CAB51032.1| 719|Drosophila melanogaster DOMINA protein
(WHN-homologue) protein.
Length = 719
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 297 ARIHETNLKK--QGVLPLTFANAADYDKIQPSDKISLLGLKDLAPGKQVDCQIKHKDGS 467
A + TN K G+ LTFAN+A Y K++ + + G ++PG + +K +D +
Sbjct: 270 ASVGATNTIKLAPGIGGLTFANSAAYQKLKQTSLVKSPG--GISPGAGSNMGLKREDSN 326
>AJ243814-1|CAB51073.1| 719|Drosophila melanogaster DOMINA protein
protein.
Length = 719
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 297 ARIHETNLKK--QGVLPLTFANAADYDKIQPSDKISLLGLKDLAPGKQVDCQIKHKDGS 467
A + TN K G+ LTFAN+A Y K++ + + G ++PG + +K +D +
Sbjct: 270 ASVGATNTIKLAPGIGGLTFANSAAYQKLKQTSLVKSPG--GISPGAGSNMGLKREDSN 326
>AF264033-1|AAF91395.1| 719|Drosophila melanogaster winged-helix
protein jumeaux protein.
Length = 719
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 297 ARIHETNLKK--QGVLPLTFANAADYDKIQPSDKISLLGLKDLAPGKQVDCQIKHKDGS 467
A + TN K G+ LTFAN+A Y K++ + + G ++PG + +K +D +
Sbjct: 270 ASVGATNTIKLAPGIGGLTFANSAAYQKLKQTSLVKSPG--GISPGAGSNMGLKREDSN 326
>AE014297-1143|AAF54525.1| 719|Drosophila melanogaster CG4029-PA
protein.
Length = 719
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 297 ARIHETNLKK--QGVLPLTFANAADYDKIQPSDKISLLGLKDLAPGKQVDCQIKHKDGS 467
A + TN K G+ LTFAN+A Y K++ + + G ++PG + +K +D +
Sbjct: 270 ASVGATNTIKLAPGIGGLTFANSAAYQKLKQTSLVKSPG--GISPGAGSNMGLKREDSN 326
>AB028890-1|BAA94598.1| 719|Drosophila melanogaster Winged-helix
nude transcriptionfactor protein.
Length = 719
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 297 ARIHETNLKK--QGVLPLTFANAADYDKIQPSDKISLLGLKDLAPGKQVDCQIKHKDGS 467
A + TN K G+ LTFAN+A Y K++ + + G ++PG + +K +D +
Sbjct: 270 ASVGATNTIKLAPGIGGLTFANSAAYQKLKQTSLVKSPG--GISPGAGSNMGLKREDSN 326
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,822,719
Number of Sequences: 53049
Number of extensions: 371945
Number of successful extensions: 1145
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1145
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1742533632
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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