Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_I03
         (494 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   7.2  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   7.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   7.2  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    21   9.5  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    21   9.5  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    21   9.5  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    21   9.5  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -3

Query: 66  WRCYRDAPCI*ARVQRPRCASC 1
           + C  +  CI  + QR RC  C
Sbjct: 144 YACREEKSCIIDKRQRNRCQYC 165


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -3

Query: 66  WRCYRDAPCI*ARVQRPRCASC 1
           + C  +  CI  + QR RC  C
Sbjct: 144 YACREEKSCIIDKRQRNRCQYC 165


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 390 CPRAESYRSRRHLR 349
           CP A   + RRH+R
Sbjct: 4   CPYARCIQERRHIR 17



 Score = 20.6 bits (41), Expect = 9.5
 Identities = 13/45 (28%), Positives = 17/45 (37%)
 Frame = -2

Query: 235  REEXXXXXXXPTTHQRTPAALYARAVPGTGPNSPVSWFRTLFSSP 101
            R++         T   T AA      PGT  N P    +  F+SP
Sbjct: 1091 RDQKQSDDKTKETSTVTAAAAATNIRPGTADNKPQLKPQKPFTSP 1135


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 192 WCVVGDENYGEGSSREHA 245
           +C+ GDE++ +   RE A
Sbjct: 431 YCLAGDESFRKRRQREAA 448


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -2

Query: 145 PNSPVSWFRTLFSSPFSAFVAVMNILLEMLSRCP 44
           PN    W++TL S+  +    V   +  +LSR P
Sbjct: 78  PNFLDGWYQTLQSAISAHMKKVREQMAGILSRIP 111


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -2

Query: 145 PNSPVSWFRTLFSSPFSAFVAVMNILLEMLSRCP 44
           PN    W++TL S+  +    V   +  +LSR P
Sbjct: 78  PNFLDGWYQTLQSAISAHMKKVREQMAGILSRIP 111


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -2

Query: 145 PNSPVSWFRTLFSSPFSAFVAVMNILLEMLSRCP 44
           PN    W++TL S+  +    V   +  +LSR P
Sbjct: 78  PNFLDGWYQTLQSAISAHMKKVREQMAGILSRIP 111


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,573
Number of Sequences: 438
Number of extensions: 2460
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13667319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)