Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_H24
(522 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M55153-1|AAA63261.1| 687|Homo sapiens transglutaminase protein. 44 4e-04
S81734-1|AAB36379.1| 349|Homo sapiens tissue transglutaminase h... 42 0.001
M98478-1|AAA36739.1| 548|Homo sapiens transglutaminase protein. 42 0.001
DQ523828-1|ABF47109.1| 687|Homo sapiens transglutaminase 2 (C p... 42 0.001
BC003551-1|AAH03551.1| 548|Homo sapiens transglutaminase 2 (C p... 42 0.001
AY675221-1|AAT79353.1| 687|Homo sapiens transglutaminase 2 prot... 42 0.001
AL031651-3|CAM27228.1| 160|Homo sapiens transglutaminase 2 (C p... 42 0.001
AL031651-2|CAM27227.1| 281|Homo sapiens transglutaminase 2 (C p... 42 0.001
AL031651-1|CAB66115.1| 687|Homo sapiens transglutaminase 2 (C p... 42 0.001
AB209108-1|BAD92345.1| 310|Homo sapiens solute carrier family 2... 29 7.5
>M55153-1|AAA63261.1| 687|Homo sapiens transglutaminase protein.
Length = 687
Score = 43.6 bits (98), Expect = 4e-04
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Frame = +3
Query: 246 IVRRGAAF*WSRKI*QGLR*NQLILVQLVFSL--GDKPQMDTHG-AMYIRRDAIPDKHTW 416
+VRRG F W +G R Q + L FS+ G P + A + RDA+ ++ W
Sbjct: 32 VVRRGQPF-WLTLHFEG-RNYQASVDSLTFSVVTGPAPSQEAGTKARFPLRDAV-EEGDW 88
Query: 417 TAKLLDIQENTLSFEVSTPVTLPVGVWALQV 509
TA ++D Q+ TLS +++TP P+G++ L +
Sbjct: 89 TATVVDQQDCTLSLQLTTPANAPIGLYRLSL 119
>S81734-1|AAB36379.1| 349|Homo sapiens tissue transglutaminase
homologue protein.
Length = 349
Score = 42.3 bits (95), Expect = 0.001
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Frame = +3
Query: 246 IVRRGAAF*WSRKI*QGLR*NQLILVQLVFSL--GDKPQMDTHG-AMYIRRDAIPDKHTW 416
+VRRG F W +G R + + L FS+ G P + A + RDA+ ++ W
Sbjct: 32 VVRRGQPF-WLTLHFEG-RNYEASVDSLTFSVVTGPAPSQEAGTKARFPLRDAV-EEGDW 88
Query: 417 TAKLLDIQENTLSFEVSTPVTLPVGVWALQV 509
TA ++D Q+ TLS +++TP P+G++ L +
Sbjct: 89 TATVVDQQDCTLSLQLTTPANAPIGLYRLSL 119
>M98478-1|AAA36739.1| 548|Homo sapiens transglutaminase protein.
Length = 548
Score = 42.3 bits (95), Expect = 0.001
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Frame = +3
Query: 246 IVRRGAAF*WSRKI*QGLR*NQLILVQLVFSL--GDKPQMDTHG-AMYIRRDAIPDKHTW 416
+VRRG F W +G R + + L FS+ G P + A + RDA+ ++ W
Sbjct: 32 VVRRGQPF-WLTLHFEG-RNYEASVDSLTFSVVTGPAPSQEAGTKARFPLRDAV-EEGDW 88
Query: 417 TAKLLDIQENTLSFEVSTPVTLPVGVWALQV 509
TA ++D Q+ TLS +++TP P+G++ L +
Sbjct: 89 TATVVDQQDCTLSLQLTTPANAPIGLYRLSL 119
>DQ523828-1|ABF47109.1| 687|Homo sapiens transglutaminase 2 (C
polypeptide,
protein-glutamine-gamma-glutamyltransferase) protein.
Length = 687
Score = 42.3 bits (95), Expect = 0.001
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Frame = +3
Query: 246 IVRRGAAF*WSRKI*QGLR*NQLILVQLVFSL--GDKPQMDTHG-AMYIRRDAIPDKHTW 416
+VRRG F W +G R + + L FS+ G P + A + RDA+ ++ W
Sbjct: 32 VVRRGQPF-WLTLHFEG-RNYEASVDSLTFSVVTGPAPSQEAGTKARFPLRDAV-EEGDW 88
Query: 417 TAKLLDIQENTLSFEVSTPVTLPVGVWALQV 509
TA ++D Q+ TLS +++TP P+G++ L +
Sbjct: 89 TATVVDQQDCTLSLQLTTPANAPIGLYRLSL 119
>BC003551-1|AAH03551.1| 548|Homo sapiens transglutaminase 2 (C
polypeptide,
protein-glutamine-gamma-glutamyltransferase) protein.
Length = 548
Score = 42.3 bits (95), Expect = 0.001
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Frame = +3
Query: 246 IVRRGAAF*WSRKI*QGLR*NQLILVQLVFSL--GDKPQMDTHG-AMYIRRDAIPDKHTW 416
+VRRG F W +G R + + L FS+ G P + A + RDA+ ++ W
Sbjct: 32 VVRRGQPF-WLTLHFEG-RNYEASVDSLTFSVVTGPAPSQEAGTKARFPLRDAV-EEGDW 88
Query: 417 TAKLLDIQENTLSFEVSTPVTLPVGVWALQV 509
TA ++D Q+ TLS +++TP P+G++ L +
Sbjct: 89 TATVVDQQDCTLSLQLTTPANAPIGLYRLSL 119
>AY675221-1|AAT79353.1| 687|Homo sapiens transglutaminase 2
protein.
Length = 687
Score = 42.3 bits (95), Expect = 0.001
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Frame = +3
Query: 246 IVRRGAAF*WSRKI*QGLR*NQLILVQLVFSL--GDKPQMDTHG-AMYIRRDAIPDKHTW 416
+VRRG F W +G R + + L FS+ G P + A + RDA+ ++ W
Sbjct: 32 VVRRGQPF-WLTLHFEG-RNYEASVDSLTFSVVTGPAPSQEAGTKARFPLRDAV-EEGDW 88
Query: 417 TAKLLDIQENTLSFEVSTPVTLPVGVWALQV 509
TA ++D Q+ TLS +++TP P+G++ L +
Sbjct: 89 TATVVDQQDCTLSLQLTTPANAPIGLYRLSL 119
>AL031651-3|CAM27228.1| 160|Homo sapiens transglutaminase 2 (C
polypeptide,
protein-glutamine-gamma-glutamyltransferase) protein.
Length = 160
Score = 42.3 bits (95), Expect = 0.001
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Frame = +3
Query: 246 IVRRGAAF*WSRKI*QGLR*NQLILVQLVFSL--GDKPQMDTHG-AMYIRRDAIPDKHTW 416
+VRRG F W +G R + + L FS+ G P + A + RDA+ ++ W
Sbjct: 32 VVRRGQPF-WLTLHFEG-RNYEASVDSLTFSVVTGPAPSQEAGTKARFPLRDAV-EEGDW 88
Query: 417 TAKLLDIQENTLSFEVSTPVTLPVGVWALQV 509
TA ++D Q+ TLS +++TP P+G++ L +
Sbjct: 89 TATVVDQQDCTLSLQLTTPANAPIGLYRLSL 119
>AL031651-2|CAM27227.1| 281|Homo sapiens transglutaminase 2 (C
polypeptide,
protein-glutamine-gamma-glutamyltransferase) protein.
Length = 281
Score = 42.3 bits (95), Expect = 0.001
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Frame = +3
Query: 246 IVRRGAAF*WSRKI*QGLR*NQLILVQLVFSL--GDKPQMDTHG-AMYIRRDAIPDKHTW 416
+VRRG F W +G R + + L FS+ G P + A + RDA+ ++ W
Sbjct: 32 VVRRGQPF-WLTLHFEG-RNYEASVDSLTFSVVTGPAPSQEAGTKARFPLRDAV-EEGDW 88
Query: 417 TAKLLDIQENTLSFEVSTPVTLPVGVWALQV 509
TA ++D Q+ TLS +++TP P+G++ L +
Sbjct: 89 TATVVDQQDCTLSLQLTTPANAPIGLYRLSL 119
>AL031651-1|CAB66115.1| 687|Homo sapiens transglutaminase 2 (C
polypeptide,
protein-glutamine-gamma-glutamyltransferase) protein.
Length = 687
Score = 42.3 bits (95), Expect = 0.001
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Frame = +3
Query: 246 IVRRGAAF*WSRKI*QGLR*NQLILVQLVFSL--GDKPQMDTHG-AMYIRRDAIPDKHTW 416
+VRRG F W +G R + + L FS+ G P + A + RDA+ ++ W
Sbjct: 32 VVRRGQPF-WLTLHFEG-RNYEASVDSLTFSVVTGPAPSQEAGTKARFPLRDAV-EEGDW 88
Query: 417 TAKLLDIQENTLSFEVSTPVTLPVGVWALQV 509
TA ++D Q+ TLS +++TP P+G++ L +
Sbjct: 89 TATVVDQQDCTLSLQLTTPANAPIGLYRLSL 119
>AB209108-1|BAD92345.1| 310|Homo sapiens solute carrier family 2
(facilitated glucose transporter), member 6 variant
protein.
Length = 310
Score = 29.5 bits (63), Expect = 7.5
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = -3
Query: 502 SAHTPTGRVTGVDTSKDNVFS*MSSSLAVQVCLSGIASRRIYMAP*VSICGLSPR--EKT 329
SA P+G TG DT + + + + LA L G++S R + SI GL R E+
Sbjct: 74 SAGAPSGH-TGCDTPRWEPNTRLETELAA---LLGVSSPR-HELDHASIKGLCRRSSERN 128
Query: 328 SWTKINWFHRKPC 290
SW + +W H C
Sbjct: 129 SWLRGSWPHEATC 141
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,129,205
Number of Sequences: 237096
Number of extensions: 1703956
Number of successful extensions: 2926
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2926
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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