Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_H21
(558 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81074-2|CAB03038.2| 671|Caenorhabditis elegans Hypothetical pr... 136 1e-32
U49829-3|AAA93384.1| 724|Caenorhabditis elegans Hypothetical pr... 126 1e-29
Z81052-1|CAB02872.1| 1175|Caenorhabditis elegans Hypothetical pr... 104 4e-23
AF237467-1|AAF60326.1| 1175|Caenorhabditis elegans pyruvate carb... 104 4e-23
Z82285-5|CAB05298.2| 1679|Caenorhabditis elegans Hypothetical pr... 50 1e-06
AF025469-6|AAR12979.1| 813|Caenorhabditis elegans Hypothetical ... 35 0.046
AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical ... 35 0.046
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 33 0.11
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ... 33 0.11
Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical pr... 27 6.9
AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical ... 27 6.9
AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein. 27 6.9
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 27 9.1
AF003141-1|AAK21483.1| 355|Caenorhabditis elegans Hypothetical ... 27 9.1
>Z81074-2|CAB03038.2| 671|Caenorhabditis elegans Hypothetical
protein F32B6.2 protein.
Length = 671
Score = 136 bits (328), Expect = 1e-32
Identities = 61/102 (59%), Positives = 82/102 (80%)
Frame = +2
Query: 197 IKKVLIANRGEIACRVMRTAKKLGIRTVAVYSDADKHAMHVEMADEAYHIGPAPSTQSYL 376
I++VL+ANRGEIA RV TA+K+GI TVAV+SDAD++++ V+ AD+AYHIGP + +SYL
Sbjct: 19 IQRVLVANRGEIAIRVQNTARKMGIETVAVFSDADRNSLFVKKADKAYHIGPPLAAESYL 78
Query: 377 NAAKILDVAKKSNSQAIHPGYGFLSENVEFCERCANEDVIFI 502
N KI++ A +S +QAIHPGYGFLSEN F E+CA ++FI
Sbjct: 79 NMDKIINSALRSGAQAIHPGYGFLSENAGFAEKCAQAGLVFI 120
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +3
Query: 504 GPPPKAIRDMGIKSTSK 554
GPP +AIRDMG K+ SK
Sbjct: 121 GPPAQAIRDMGAKNVSK 137
>U49829-3|AAA93384.1| 724|Caenorhabditis elegans Hypothetical
protein F27D9.5 protein.
Length = 724
Score = 126 bits (304), Expect = 1e-29
Identities = 57/106 (53%), Positives = 78/106 (73%)
Frame = +2
Query: 203 KVLIANRGEIACRVMRTAKKLGIRTVAVYSDADKHAMHVEMADEAYHIGPAPSTQSYLNA 382
K+LIANRGEIACRV++TA+ +GI+TVAV+SD D +++HV+MADEA +G AP+ +SYL A
Sbjct: 51 KILIANRGEIACRVIKTARAMGIKTVAVHSDVDSNSLHVKMADEAVCVGEAPTAKSYLRA 110
Query: 383 AKILDVAKKSNSQAIHPGYGFLSENVEFCERCANEDVIFIWATSKS 520
+IL + + +QA+HPGYGFLSEN +F FI SK+
Sbjct: 111 DRILQAVEDTGAQAVHPGYGFLSENTKFAAELEKAGAKFIGPNSKA 156
>Z81052-1|CAB02872.1| 1175|Caenorhabditis elegans Hypothetical
protein D2023.2 protein.
Length = 1175
Score = 104 bits (250), Expect = 4e-23
Identities = 54/129 (41%), Positives = 79/129 (61%), Gaps = 2/129 (1%)
Frame = +2
Query: 122 LLAHIQNQIRF-NHAQQVKEEVGYQQIKKVLIANRGEIACRVMRTAKKLGIRTVAVYSDA 298
+ A++ Q + N+A V + ++ KV++ANRGEIA RV R +L +VA+Y++
Sbjct: 9 IFANVVRQTHYRNYANGV---IKPREFNKVMVANRGEIAIRVFRALTELNKTSVAIYAEQ 65
Query: 299 DKHAMHVEMADEAYHIGPA-PSTQSYLNAAKILDVAKKSNSQAIHPGYGFLSENVEFCER 475
DK++MH ADEAY +G P +YL +I++ A K N AIHPGYGFLSE +F
Sbjct: 66 DKNSMHRLKADEAYLVGKGLPPVAAYLTIDQIIETALKHNIDAIHPGYGFLSERSDFAAA 125
Query: 476 CANEDVIFI 502
C N ++FI
Sbjct: 126 CQNAGIVFI 134
>AF237467-1|AAF60326.1| 1175|Caenorhabditis elegans pyruvate
carboxylase protein.
Length = 1175
Score = 104 bits (250), Expect = 4e-23
Identities = 54/129 (41%), Positives = 79/129 (61%), Gaps = 2/129 (1%)
Frame = +2
Query: 122 LLAHIQNQIRF-NHAQQVKEEVGYQQIKKVLIANRGEIACRVMRTAKKLGIRTVAVYSDA 298
+ A++ Q + N+A V + ++ KV++ANRGEIA RV R +L +VA+Y++
Sbjct: 9 IFANVVRQTHYRNYANGV---IKPREFNKVMVANRGEIAIRVFRALTELNKTSVAIYAEQ 65
Query: 299 DKHAMHVEMADEAYHIGPA-PSTQSYLNAAKILDVAKKSNSQAIHPGYGFLSENVEFCER 475
DK++MH ADEAY +G P +YL +I++ A K N AIHPGYGFLSE +F
Sbjct: 66 DKNSMHRLKADEAYLVGKGLPPVAAYLTIDQIIETALKHNIDAIHPGYGFLSERSDFAAA 125
Query: 476 CANEDVIFI 502
C N ++FI
Sbjct: 126 CQNAGIVFI 134
>Z82285-5|CAB05298.2| 1679|Caenorhabditis elegans Hypothetical
protein T28F3.5 protein.
Length = 1679
Score = 49.6 bits (113), Expect = 1e-06
Identities = 35/128 (27%), Positives = 64/128 (50%), Gaps = 11/128 (8%)
Frame = +2
Query: 170 VKEEVGYQQIKKVLIANRGEIACRVMRTAKK-----LGIRTVAVY-----SDADKHAMH- 316
VK G + IK++L+AN G A + + + ++ G V + D + A H
Sbjct: 21 VKMLEGGRSIKRILVANNGLAAMKCLISIRQWLQNQFGTSGVVSFVCIATEDEMRSASHY 80
Query: 317 VEMADEAYHIGPAPSTQSYLNAAKILDVAKKSNSQAIHPGYGFLSENVEFCERCANEDVI 496
+++ADE +++++ N I+ +A ++ A++ G+G SEN E C R ++I
Sbjct: 81 LKLADEIVMAPAGSNSKNFANCDVIIRLAVEAQVDAVYVGWGHASENPELCRRLELNNII 140
Query: 497 FIWATSKS 520
FI + KS
Sbjct: 141 FIGPSEKS 148
>AF025469-6|AAR12979.1| 813|Caenorhabditis elegans Hypothetical
protein W09B6.1b protein.
Length = 813
Score = 34.7 bits (76), Expect = 0.046
Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 12/114 (10%)
Frame = +2
Query: 197 IKKVLIANRGEIACRVMRTAKKLGIRT---------VAVYSDADKHAMHVEMADEAYHIG 349
IK++L+A G A R + TAKK T V + ++ + +M + +
Sbjct: 48 IKRLLVATNGIAAMRCLMTAKKFLHHTFRNDNLIHFVCMTTEDEIQSMSESLRMPNITLA 107
Query: 350 PAPS---TQSYLNAAKILDVAKKSNSQAIHPGYGFLSENVEFCERCANEDVIFI 502
+PS ++ N +IL A K A+ G+G SEN + R + ++ FI
Sbjct: 108 ESPSGTNKNNFANVDEILKHAIKYEVDAVWAGWGHASENPDLPRRLNDHNIAFI 161
>AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical
protein W09B6.1a protein.
Length = 2054
Score = 34.7 bits (76), Expect = 0.046
Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 12/114 (10%)
Frame = +2
Query: 197 IKKVLIANRGEIACRVMRTAKKLGIRT---------VAVYSDADKHAMHVEMADEAYHIG 349
IK++L+A G A R + TAKK T V + ++ + +M + +
Sbjct: 48 IKRLLVATNGIAAMRCLMTAKKFLHHTFRNDNLIHFVCMTTEDEIQSMSESLRMPNITLA 107
Query: 350 PAPS---TQSYLNAAKILDVAKKSNSQAIHPGYGFLSENVEFCERCANEDVIFI 502
+PS ++ N +IL A K A+ G+G SEN + R + ++ FI
Sbjct: 108 ESPSGTNKNNFANVDEILKHAIKYEVDAVWAGWGHASENPDLPRRLNDHNIAFI 161
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 33.5 bits (73), Expect = 0.11
Identities = 20/68 (29%), Positives = 37/68 (54%)
Frame = +2
Query: 125 LAHIQNQIRFNHAQQVKEEVGYQQIKKVLIANRGEIACRVMRTAKKLGIRTVAVYSDADK 304
LAH+Q++++ HAQ+ + E+ Y QI+++ +IA ++ A R S+ +
Sbjct: 584 LAHLQSELQTAHAQRQEFEIHYHQIRELAEQKDHQIA-QLTEQANDYQERLEKSQSELQE 642
Query: 305 HAMHVEMA 328
A HV+ A
Sbjct: 643 LARHVDSA 650
>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
protein R148.3b protein.
Length = 1130
Score = 33.5 bits (73), Expect = 0.11
Identities = 20/68 (29%), Positives = 37/68 (54%)
Frame = +2
Query: 125 LAHIQNQIRFNHAQQVKEEVGYQQIKKVLIANRGEIACRVMRTAKKLGIRTVAVYSDADK 304
LAH+Q++++ HAQ+ + E+ Y QI+++ +IA ++ A R S+ +
Sbjct: 596 LAHLQSELQTAHAQRQEFEIHYHQIRELAEQKDHQIA-QLTEQANDYQERLEKSQSELQE 654
Query: 305 HAMHVEMA 328
A HV+ A
Sbjct: 655 LARHVDSA 662
>Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 27.5 bits (58), Expect = 6.9
Identities = 18/80 (22%), Positives = 33/80 (41%)
Frame = +2
Query: 284 VYSDADKHAMHVEMADEAYHIGPAPSTQSYLNAAKILDVAKKSNSQAIHPGYGFLSENVE 463
+++ AD A H+E E +G P T + + Q +GFL+ E
Sbjct: 39 IHASADFLAFHIE--GEGGKLGVLPITAKGRRTRNDIGIIAAHGEQVAD--FGFLTFADE 94
Query: 464 FCERCANEDVIFIWATSKSN 523
C+ ++ + IW S+ +
Sbjct: 95 LLATCSRDEPVKIWKLSRDH 114
>AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 27.5 bits (58), Expect = 6.9
Identities = 18/80 (22%), Positives = 33/80 (41%)
Frame = +2
Query: 284 VYSDADKHAMHVEMADEAYHIGPAPSTQSYLNAAKILDVAKKSNSQAIHPGYGFLSENVE 463
+++ AD A H+E E +G P T + + Q +GFL+ E
Sbjct: 39 IHASADFLAFHIE--GEGGKLGVLPITAKGRRTRNDIGIIAAHGEQVAD--FGFLTFADE 94
Query: 464 FCERCANEDVIFIWATSKSN 523
C+ ++ + IW S+ +
Sbjct: 95 LLATCSRDEPVKIWKLSRDH 114
>AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.
Length = 1057
Score = 27.5 bits (58), Expect = 6.9
Identities = 18/80 (22%), Positives = 33/80 (41%)
Frame = +2
Query: 284 VYSDADKHAMHVEMADEAYHIGPAPSTQSYLNAAKILDVAKKSNSQAIHPGYGFLSENVE 463
+++ AD A H+E E +G P T + + Q +GFL+ E
Sbjct: 39 IHASADFLAFHIE--GEGGKLGVLPITAKGRRTRNDIGIIAAHGEQVAD--FGFLTFADE 94
Query: 464 FCERCANEDVIFIWATSKSN 523
C+ ++ + IW S+ +
Sbjct: 95 LLATCSRDEPVKIWKLSRDH 114
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -2
Query: 293 QNIRLRFLCPVFLQSASLCMLSHHG 219
Q+I+ CP+ LQ+ASL LSH G
Sbjct: 35 QSIQSLDTCPLLLQTASLPSLSHIG 59
>AF003141-1|AAK21483.1| 355|Caenorhabditis elegans Hypothetical
protein W02D3.4 protein.
Length = 355
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = -1
Query: 519 LLEVAQIKITSSLAHLSQNSTFSDRKPYPGCIA 421
L VAQ + HLSQ TF PGCIA
Sbjct: 281 LWAVAQTSFFVANQHLSQTVTFPIISQMPGCIA 313
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,473,920
Number of Sequences: 27780
Number of extensions: 215615
Number of successful extensions: 477
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 475
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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