Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_H16
         (620 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              23   1.8  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    23   2.4  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    23   2.4  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   4.2  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   4.2  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    22   5.5  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   9.7  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    21   9.7  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   9.7  

>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +1

Query: 385 GTFAPQTGSKTGKLKTSFTNDTVAVNTNL 471
           GT   Q    TG    +F NDTV+  T +
Sbjct: 86  GTSESQWEDVTGSTPLTFVNDTVSFTTTV 114


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -2

Query: 601 NQEQSCSLRTLPSVNQTA 548
           +++Q CS+ ++ SVN T+
Sbjct: 398 DEDQKCSIESITSVNSTS 415


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = +1

Query: 163 FKLDLKTKSESGVEFTSGITSNQ 231
           F+LDL+ + E+G + +S IT+ +
Sbjct: 174 FQLDLQLQDEAGGDISSFITNGE 196


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 384 RHLCTTDWEQDW*TEDVIY 440
           R L TTDW   W + DV++
Sbjct: 111 RWLFTTDWCDVWRSLDVLF 129


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = -1

Query: 542 TPASQPW*LSTPATSTTGPA-RSKSKLVLTATVS 444
           +PAS P  LS  ATS+T  + R  S    T  +S
Sbjct: 822 SPASSPRYLSAAATSSTSTSPRPASSTAATLVLS 855


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/26 (30%), Positives = 17/26 (65%)
 Frame = +2

Query: 503 WLVYSITMAGSPESTRSLIHRRQSSQ 580
           WL+  + ++ + +   S IH+R+SS+
Sbjct: 4   WLLLIVCLSIACQDVTSAIHQRKSSK 29


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 11/46 (23%), Positives = 23/46 (50%)
 Frame = +1

Query: 415 TGKLKTSFTNDTVAVNTNLDLDLAGPVVDVAGVLNYHGWLAGVHTQ 552
           T  L+   T   +A   +  ++L+G  +    V+  H W+AG++ +
Sbjct: 386 TESLRLIPTTTCIARILDEPIELSGYRLTAGTVVLLHTWIAGLNEE 431


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +2

Query: 68  ELNKLQAWLLHTM 106
           EL K+  W LH M
Sbjct: 272 ELTKIDKWFLHKM 284


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/19 (36%), Positives = 9/19 (47%)
 Frame = +3

Query: 288 PHIHREMEYRQHSGD*YYH 344
           PH H   +Y  H G   +H
Sbjct: 318 PHQHHPSQYHPHRGSSPHH 336


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,630
Number of Sequences: 438
Number of extensions: 3472
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)