Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_H11
         (558 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF587234-1|ABQ85891.1|  981|Drosophila melanogaster MCPH1 isofor...    30   1.8  
BT022275-1|AAY54691.1|  219|Drosophila melanogaster IP08164p pro...    30   1.8  
AE013599-1359|AAM68699.2|  219|Drosophila melanogaster CG30038-P...    30   1.8  
BT001273-1|AAN71029.1|  561|Drosophila melanogaster AT05468p pro...    28   7.4  
AE014296-2956|AAN11698.1|  561|Drosophila melanogaster CG32178-P...    28   7.4  
AB025255-1|BAB18576.1|  561|Drosophila melanogaster male-specifi...    28   7.4  

>EF587234-1|ABQ85891.1|  981|Drosophila melanogaster MCPH1 isoform A
           protein.
          Length = 981

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -1

Query: 540 LNSVDRNHLSSFTKGLGRALIALSQEWLVASTRASKW 430
           L S++     +  +GL R +  +S +W++AS RA KW
Sbjct: 794 LVSLEPRRTLNLLRGLMRGVWIVSYQWVLASIRAGKW 830


>BT022275-1|AAY54691.1|  219|Drosophila melanogaster IP08164p
           protein.
          Length = 219

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -1

Query: 540 LNSVDRNHLSSFTKGLGRALIALSQEWLVASTRASKW 430
           L S++     +  +GL R +  +S +W++AS RA KW
Sbjct: 32  LVSLEPRRTLNLLRGLMRGVWIVSYQWVLASIRAGKW 68


>AE013599-1359|AAM68699.2|  219|Drosophila melanogaster CG30038-PA
           protein.
          Length = 219

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -1

Query: 540 LNSVDRNHLSSFTKGLGRALIALSQEWLVASTRASKW 430
           L S++     +  +GL R +  +S +W++AS RA KW
Sbjct: 32  LVSLEPRRTLNLLRGLMRGVWIVSYQWVLASIRAGKW 68


>BT001273-1|AAN71029.1|  561|Drosophila melanogaster AT05468p
           protein.
          Length = 561

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 14/56 (25%), Positives = 25/56 (44%)
 Frame = +3

Query: 282 NHQVINGRPSIFYHLLTSDLT*PLNHRRFSMGEYAYICLRLQACQVKVHAILMLLC 449
           N Q I G P     ++  +L    N R+ S  +Y  +C  +    +    +L+L+C
Sbjct: 8   NVQEIRGTPQNAMRMIRLELDEEENRRQMSSSKYGGVCFHVAIAVMLCVMVLVLIC 63


>AE014296-2956|AAN11698.1|  561|Drosophila melanogaster CG32178-PA,
           isoform A protein.
          Length = 561

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 14/56 (25%), Positives = 25/56 (44%)
 Frame = +3

Query: 282 NHQVINGRPSIFYHLLTSDLT*PLNHRRFSMGEYAYICLRLQACQVKVHAILMLLC 449
           N Q I G P     ++  +L    N R+ S  +Y  +C  +    +    +L+L+C
Sbjct: 8   NVQEIRGTPQNAMRMIRLELDEEENRRQMSSSKYGGVCFHVAIAVMLCVMVLVLIC 63


>AB025255-1|BAB18576.1|  561|Drosophila melanogaster male-specific
           IDGF protein.
          Length = 561

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 14/56 (25%), Positives = 25/56 (44%)
 Frame = +3

Query: 282 NHQVINGRPSIFYHLLTSDLT*PLNHRRFSMGEYAYICLRLQACQVKVHAILMLLC 449
           N Q I G P     ++  +L    N R+ S  +Y  +C  +    +    +L+L+C
Sbjct: 8   NVQEIRGTPQNAMRMIRLELDEEENRRQMSSSKYGGVCFHVAIAVMLCVMVLVLIC 63


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,795,845
Number of Sequences: 53049
Number of extensions: 396833
Number of successful extensions: 807
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 807
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2151905496
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)