Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_H01
(518 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical pr... 30 1.1
AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical... 30 1.1
Z81102-6|CAB03207.2| 571|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z81102-4|CAB03204.2| 639|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z69659-7|CAA93488.2| 571|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z69659-6|CAA93486.2| 639|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z75545-2|CAA99885.1| 327|Caenorhabditis elegans Hypothetical pr... 28 4.6
U13876-17|AAA21167.1| 253|Caenorhabditis elegans Hypothetical p... 28 4.6
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 28 4.6
Z82076-6|CAH10809.1| 450|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z82076-4|CAB04937.2| 438|Caenorhabditis elegans Hypothetical pr... 27 6.1
AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical ... 27 6.1
AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein. 27 6.1
AF003135-4|AAO38590.1| 1039|Caenorhabditis elegans Hypothetical ... 27 6.1
AF003135-3|AAO38589.1| 1184|Caenorhabditis elegans Hypothetical ... 27 6.1
AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical ... 27 6.1
AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical ... 27 6.1
Z81050-12|CAN86586.1| 420|Caenorhabditis elegans Hypothetical p... 27 8.0
Z81050-11|CAN86585.1| 399|Caenorhabditis elegans Hypothetical p... 27 8.0
U50199-3|AAA91263.1| 555|Caenorhabditis elegans Hypothetical pr... 27 8.0
AM748820-1|CAO72174.1| 555|Caenorhabditis elegans hexosaminidas... 27 8.0
AF036705-9|AAO91724.1| 686|Caenorhabditis elegans Hypothetical ... 27 8.0
>Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical protein
W04A8.7 protein.
Length = 1792
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 103 SHDHEQEQKEEPTQGPYEDDDGMVGDD 183
S DH E ++ PT+ EDDD + DD
Sbjct: 1712 SDDHMDEMEDHPTEEEEEDDDDEIMDD 1738
>AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical
protein W04A8.7 protein.
Length = 1792
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 103 SHDHEQEQKEEPTQGPYEDDDGMVGDD 183
S DH E ++ PT+ EDDD + DD
Sbjct: 1712 SDDHMDEMEDHPTEEEEEDDDDEIMDD 1738
>Z81102-6|CAB03207.2| 571|Caenorhabditis elegans Hypothetical
protein F07C6.4c protein.
Length = 571
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +1
Query: 13 GLQSPHLKTSAMLKSPPQIDSHYSRAADAHSHDHEQEQKEEPTQGP 150
G QSP + L + PQ+++ S H+Q+ + P+Q P
Sbjct: 520 GAQSPAPPPNGKLPTNPQMEALLSYYKQQQQQQHQQQSRSAPSQQP 565
>Z81102-4|CAB03204.2| 639|Caenorhabditis elegans Hypothetical
protein F07C6.4b protein.
Length = 639
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +1
Query: 13 GLQSPHLKTSAMLKSPPQIDSHYSRAADAHSHDHEQEQKEEPTQGP 150
G QSP + L + PQ+++ S H+Q+ + P+Q P
Sbjct: 588 GAQSPAPPPNGKLPTNPQMEALLSYYKQQQQQQHQQQSRSAPSQQP 633
>Z69659-7|CAA93488.2| 571|Caenorhabditis elegans Hypothetical
protein F07C6.4c protein.
Length = 571
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +1
Query: 13 GLQSPHLKTSAMLKSPPQIDSHYSRAADAHSHDHEQEQKEEPTQGP 150
G QSP + L + PQ+++ S H+Q+ + P+Q P
Sbjct: 520 GAQSPAPPPNGKLPTNPQMEALLSYYKQQQQQQHQQQSRSAPSQQP 565
>Z69659-6|CAA93486.2| 639|Caenorhabditis elegans Hypothetical
protein F07C6.4b protein.
Length = 639
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +1
Query: 13 GLQSPHLKTSAMLKSPPQIDSHYSRAADAHSHDHEQEQKEEPTQGP 150
G QSP + L + PQ+++ S H+Q+ + P+Q P
Sbjct: 588 GAQSPAPPPNGKLPTNPQMEALLSYYKQQQQQQHQQQSRSAPSQQP 633
>Z75545-2|CAA99885.1| 327|Caenorhabditis elegans Hypothetical
protein K10D3.3 protein.
Length = 327
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +3
Query: 309 LLKSDSMVASVSLLPLIRYEVYQKYYFNVKASLLKII 419
LLK+ +VA+ S + RYEVY+K F K+++ ++I
Sbjct: 218 LLKNQVLVANFSQEQIERYEVYRKSSFK-KSTIKRLI 253
>U13876-17|AAA21167.1| 253|Caenorhabditis elegans Hypothetical
protein F57B9.1 protein.
Length = 253
Score = 27.9 bits (59), Expect = 4.6
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +1
Query: 28 HLKTSAMLKSPPQIDSHYSRAADAHSHDHEQEQKEEPTQGPYE 156
HL + + P ID RA +SHD + + PT P+E
Sbjct: 20 HLARRSYVMETPSIDIQNIRAKYLNSHDPYLLESKLPTTSPFE 62
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 27.9 bits (59), Expect = 4.6
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Frame = +1
Query: 1 ARGDGLQSPHLKTSAMLK-SPPQIDS-----HYSRAADAHSHDHEQEQKEEPTQGPYEDD 162
A+ DG+Q P +K +PPQ D Y+ D E+E+ E+ Y DD
Sbjct: 175 AQKDGIQVPETIEEYCVKWAPPQQDDVFDDIDYNDDFGCDYDDDEEEEDEDECGSDYNDD 234
Query: 163 D 165
D
Sbjct: 235 D 235
>Z82076-6|CAH10809.1| 450|Caenorhabditis elegans Hypothetical
protein W07G1.5b protein.
Length = 450
Score = 27.5 bits (58), Expect = 6.1
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +1
Query: 70 DSHYSRAADAHSHDHEQEQKEEPTQGPYEDDDGMVGDDPAAYLSN 204
D +D D E E++EE + EDDD + PA+ S+
Sbjct: 385 DEAEEEPSDEEEEDEETEEEEEEEEEEEEDDDESRVETPASRKSS 429
>Z82076-4|CAB04937.2| 438|Caenorhabditis elegans Hypothetical
protein W07G1.5a protein.
Length = 438
Score = 27.5 bits (58), Expect = 6.1
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +1
Query: 70 DSHYSRAADAHSHDHEQEQKEEPTQGPYEDDDGMVGDDPAAYLSN 204
D +D D E E++EE + EDDD + PA+ S+
Sbjct: 373 DEAEEEPSDEEEEDEETEEEEEEEEEEEEDDDESRVETPASRKSS 417
>AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical
protein F13C5.2 protein.
Length = 374
Score = 27.5 bits (58), Expect = 6.1
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +1
Query: 94 DAHSHDHEQEQKEEPTQGPYEDDDGMVGDD 183
+ DHE E++E+ + +++DG+ DD
Sbjct: 276 EKEEEDHEDEREEQEEEDSSDEEDGLDDDD 305
>AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein.
Length = 1666
Score = 27.5 bits (58), Expect = 6.1
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
Frame = +1
Query: 37 TSAMLKSPPQIDSH-----YSRAADAHSHDHEQEQKEEP 138
T ++ +PP +H + A+DAH H H+ +Q++ P
Sbjct: 902 TVSLTPAPPAAMTHSMHAMHIGASDAHYHQHQHQQQQNP 940
>AF003135-4|AAO38590.1| 1039|Caenorhabditis elegans Hypothetical
protein W03F11.6e protein.
Length = 1039
Score = 27.5 bits (58), Expect = 6.1
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
Frame = +1
Query: 37 TSAMLKSPPQIDSH-----YSRAADAHSHDHEQEQKEEP 138
T ++ +PP +H + A+DAH H H+ +Q++ P
Sbjct: 900 TVSLTPAPPAAMTHSMHAMHIGASDAHYHQHQHQQQQNP 938
>AF003135-3|AAO38589.1| 1184|Caenorhabditis elegans Hypothetical
protein W03F11.6d protein.
Length = 1184
Score = 27.5 bits (58), Expect = 6.1
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
Frame = +1
Query: 37 TSAMLKSPPQIDSH-----YSRAADAHSHDHEQEQKEEP 138
T ++ +PP +H + A+DAH H H+ +Q++ P
Sbjct: 900 TVSLTPAPPAAMTHSMHAMHIGASDAHYHQHQHQQQQNP 938
>AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical
protein W03F11.6c protein.
Length = 1419
Score = 27.5 bits (58), Expect = 6.1
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
Frame = +1
Query: 37 TSAMLKSPPQIDSH-----YSRAADAHSHDHEQEQKEEP 138
T ++ +PP +H + A+DAH H H+ +Q++ P
Sbjct: 900 TVSLTPAPPAAMTHSMHAMHIGASDAHYHQHQHQQQQNP 938
>AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical
protein W03F11.6a protein.
Length = 1658
Score = 27.5 bits (58), Expect = 6.1
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
Frame = +1
Query: 37 TSAMLKSPPQIDSH-----YSRAADAHSHDHEQEQKEEP 138
T ++ +PP +H + A+DAH H H+ +Q++ P
Sbjct: 900 TVSLTPAPPAAMTHSMHAMHIGASDAHYHQHQHQQQQNP 938
>Z81050-12|CAN86586.1| 420|Caenorhabditis elegans Hypothetical
protein C50B6.14b protein.
Length = 420
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Frame = +3
Query: 297 GTSRLLKSDSMVAS--VSLLPLIRYEVYQKYYFNVKASLL 410
GT ++ ++ +S +S++PLIRY+V Q Y +KA L
Sbjct: 292 GTLQMHRNQEYYSSNVMSIIPLIRYQVQQIEYVLLKAICL 331
>Z81050-11|CAN86585.1| 399|Caenorhabditis elegans Hypothetical
protein C50B6.14a protein.
Length = 399
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Frame = +3
Query: 297 GTSRLLKSDSMVAS--VSLLPLIRYEVYQKYYFNVKASLL 410
GT ++ ++ +S +S++PLIRY+V Q Y +KA L
Sbjct: 271 GTLQMHRNQEYYSSNVMSIIPLIRYQVQQIEYVLLKAICL 310
>U50199-3|AAA91263.1| 555|Caenorhabditis elegans Hypothetical
protein T14F9.3 protein.
Length = 555
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 260 TPQNIPSTPAACWHLPPIKVRLDGR 334
T QN P +ACW+L IK D R
Sbjct: 414 TSQNFPVIVSACWYLNYIKYGADWR 438
>AM748820-1|CAO72174.1| 555|Caenorhabditis elegans hexosaminidase
protein.
Length = 555
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 260 TPQNIPSTPAACWHLPPIKVRLDGR 334
T QN P +ACW+L IK D R
Sbjct: 414 TSQNFPVIVSACWYLNYIKYGADWR 438
>AF036705-9|AAO91724.1| 686|Caenorhabditis elegans Hypothetical
protein F37C4.2 protein.
Length = 686
Score = 27.1 bits (57), Expect = 8.0
Identities = 11/41 (26%), Positives = 27/41 (65%)
Frame = +3
Query: 330 VASVSLLPLIRYEVYQKYYFNVKASLLKIILRILYHRSLLV 452
+AS +L +I YE ++K+Y + ++ + I++ L+ +++V
Sbjct: 349 LASSIVLAVITYETFEKWYLRLTSTSIGILVVALFFINVVV 389
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,038,954
Number of Sequences: 27780
Number of extensions: 170044
Number of successful extensions: 623
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 623
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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