Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_G22
         (559 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069675-1|AAL39820.1|  700|Drosophila melanogaster LD44979p pro...    29   3.2  
AE014297-3690|AAN14031.1|  699|Drosophila melanogaster CG6422-PB...    29   3.2  
AE014297-3689|AAF56381.1|  700|Drosophila melanogaster CG6422-PA...    29   3.2  
BT001679-1|AAN71434.1|  699|Drosophila melanogaster RE55836p pro...    28   9.8  

>AY069675-1|AAL39820.1|  700|Drosophila melanogaster LD44979p
           protein.
          Length = 700

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = +2

Query: 233 YGSNRNKHFNKHKNTNMQ--KRRDVPYSAYRAKNG 331
           YGSN  K+  KH NTN    K RD  +S  + K G
Sbjct: 649 YGSNNRKNEYKHNNTNKARLKTRDRDFSTEQIKIG 683


>AE014297-3690|AAN14031.1|  699|Drosophila melanogaster CG6422-PB,
           isoform B protein.
          Length = 699

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = +2

Query: 233 YGSNRNKHFNKHKNTNMQ--KRRDVPYSAYRAKNG 331
           YGSN  K+  KH NTN    K RD  +S  + K G
Sbjct: 648 YGSNNRKNEYKHNNTNKARLKTRDRDFSTEQIKIG 682


>AE014297-3689|AAF56381.1|  700|Drosophila melanogaster CG6422-PA,
           isoform A protein.
          Length = 700

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = +2

Query: 233 YGSNRNKHFNKHKNTNMQ--KRRDVPYSAYRAKNG 331
           YGSN  K+  KH NTN    K RD  +S  + K G
Sbjct: 649 YGSNNRKNEYKHNNTNKARLKTRDRDFSTEQIKIG 683


>BT001679-1|AAN71434.1|  699|Drosophila melanogaster RE55836p
           protein.
          Length = 699

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = +2

Query: 233 YGSNRNKHFNKHKNTNMQ--KRRDVPYSAYRAKNG 331
           YGSN  K+  KH NTN    K RD   S  + K G
Sbjct: 648 YGSNNRKNEYKHNNTNKARLKTRDRDLSTEQIKIG 682


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,594,938
Number of Sequences: 53049
Number of extensions: 486252
Number of successful extensions: 1033
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1030
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2151905496
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)