Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_G20
         (250 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    23   0.76 
S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    22   1.0  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    20   4.0  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    20   4.0  
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    19   9.3  

>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 22.6 bits (46), Expect = 0.76
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +1

Query: 118 IFIYIVTA*YGFLNVIY*EKSCIP 189
           IF++     + F+N IY  K  +P
Sbjct: 303 IFLFAAMVEFAFVNTIYRRKKTVP 326


>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
           peptide protein.
          Length = 50

 Score = 22.2 bits (45), Expect = 1.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 126 LHCDCLIRIFKCHILRKI 179
           + C+C   + K HI RKI
Sbjct: 28  IKCNCKRHVIKPHICRKI 45


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 20.2 bits (40), Expect = 4.0
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +3

Query: 162 HILRKIVYPTCTQEAAYAYAG 224
           HIL+K      TQ   Y Y G
Sbjct: 308 HILQKTTLNMLTQVECYKYYG 328


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 20.2 bits (40), Expect = 4.0
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 132 CDCLIRIFKCHILRKIVY 185
           CD ++++FK    RK +Y
Sbjct: 425 CDFVVKLFKTFKDRKYLY 442


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 19.0 bits (37), Expect = 9.3
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3

Query: 63  DIKFDRSNLDYTMNIMLVDF 122
           D+K D   LD   +I + DF
Sbjct: 110 DLKLDNVLLDQDGHIKIADF 129


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,292
Number of Sequences: 438
Number of extensions: 831
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4401495
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)