Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_G19
         (465 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    23   1.6  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   4.9  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    21   6.5  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   6.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   6.5  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   8.6  

>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = -3

Query: 148 VDTTLSKLDLLRTRTLSSVGISSPRVNPRRVIAKNIATRILMIHQY 11
           +   +S L +L    L++V      +NP ++  KNI  ++L I+ Y
Sbjct: 439 ISRAMSALRILEKHELANV--HPVGINPGKMQLKNIIKKLLQINCY 482


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +3

Query: 273 VDATQEQELAESYGVRGYPTLKFFRNGNPVDYSGG 377
           +D  + +E+A  Y    +P L    NGN V  +GG
Sbjct: 75  MDKFRGEEIAILYDPGMFPALLKDPNGNVVARNGG 109


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 11  ILVDHQDACSNIFGYNPSRVYSRRRNSD 94
           ILVD     S +   NP+RV +  R+ D
Sbjct: 300 ILVDDCGCNSTMLNENPARVMACMRSVD 327


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 11  ILVDHQDACSNIFGYNPSRVYSRRRNSD 94
           ILVD     S +   NP+RV +  R+ D
Sbjct: 300 ILVDDCGCNSTMLNENPARVMACMRSVD 327


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/34 (26%), Positives = 19/34 (55%)
 Frame = +3

Query: 234 KLAEEESPIKLAKVDATQEQELAESYGVRGYPTL 335
           ++A + +P+    +   +E+EL E+    G PT+
Sbjct: 343 EVALDRTPVTQGLLRVKKEEELQEAPSCGGGPTI 376


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 18  WIIKMRVAIFLAITL 62
           WII  R+ +FL  TL
Sbjct: 376 WIISDRMPVFLLXTL 390


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,592
Number of Sequences: 438
Number of extensions: 2065
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12436029
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)