Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_G18
(508 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0701 + 5238179-5238461,5238540-5238949,5240413-5240793,524... 102 2e-22
04_01_0058 + 592846-593185,594641-595182,596298-596987,597078-59... 86 2e-17
04_04_0260 + 23996775-23996865,23997031-23997566,23998407-239988... 80 9e-16
12_01_0490 + 3878436-3878466,3878559-3879113,3879218-3879777,388... 71 7e-13
11_01_0532 + 4201374-4201401,4201475-4202652,4204316-4204670,420... 65 3e-11
03_02_1011 + 13198641-13198899,13199471-13199604,13199805-131999... 31 0.53
08_02_1623 - 28314402-28315094 30 0.93
11_06_0561 - 24984960-24985205,24985283-24985354,24985906-249859... 29 2.8
02_01_0395 + 2869748-2870045,2870450-2870571,2871700-2871777,287... 29 2.8
01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755 29 2.8
05_01_0131 + 888247-888771,889092-889154 28 3.7
10_03_0034 + 7257033-7257045,7257074-7257104,7257880-7258009,725... 27 6.5
02_05_1245 + 35223504-35224778 27 6.5
02_01_0269 + 1788788-1789508,1789629-1789658,1790127-1790368,179... 27 6.5
12_02_0702 - 22278513-22278751,22279054-22279889,22279932-222799... 27 8.7
11_08_0035 - 27838495-27838655,27838750-27838897,27838987-278391... 27 8.7
09_06_0147 + 21195222-21195377,21195471-21195522,21196842-212043... 27 8.7
05_04_0123 + 18210069-18213737 27 8.7
05_03_0475 + 14486969-14487140,14487215-14487338,14487424-144875... 27 8.7
04_04_0028 - 22243272-22243577,22244564-22244713,22244919-222456... 27 8.7
01_06_1741 + 39581656-39581680,39582627-39582697,39582779-395828... 27 8.7
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892... 27 8.7
>02_01_0701 +
5238179-5238461,5238540-5238949,5240413-5240793,
5241112-5241244,5241495-5241622,5241714-5241914
Length = 511
Score = 102 bits (244), Expect = 2e-22
Identities = 48/95 (50%), Positives = 63/95 (66%), Gaps = 4/95 (4%)
Frame = +2
Query: 134 IVVPSYSAWFDYNSIHMIEKRALPEFFNGK----NKSKTPEIYLAYRNFMIDTYRLNPTE 301
I +PSYSAWF Y+SIH E+R +PEFF G+ + S+ PE Y YR+ ++ +R P
Sbjct: 88 ITIPSYSAWFSYDSIHETERRLMPEFFEGEAAAASGSRGPEAYKYYRDTLVRRFRARPGR 147
Query: 302 YLTSTASRRNLAGDVCAIMRVHGFLEQWGLINYQA 406
LT T +RR L GDV ++ RV FLE+WGLINY A
Sbjct: 148 RLTLTEARRGLVGDVGSVRRVFDFLEEWGLINYGA 182
>04_01_0058 +
592846-593185,594641-595182,596298-596987,597078-597233,
597277-597856,598601-598764,598907-599100,599702-599750,
599777-599806
Length = 914
Score = 85.8 bits (203), Expect = 2e-17
Identities = 39/88 (44%), Positives = 55/88 (62%)
Frame = +2
Query: 137 VVPSYSAWFDYNSIHMIEKRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTST 316
VVPS++ WF + IH IEK+ALP FF+G + +TPEIYL RNF++ + NP +L
Sbjct: 108 VVPSFAGWFSWKEIHQIEKQALPSFFDGISLRRTPEIYLGIRNFIMKKFHSNPQMHLELK 167
Query: 317 ASRRNLAGDVCAIMRVHGFLEQWGLINY 400
G++ A ++V FL WGLIN+
Sbjct: 168 DLSELSDGEMDAQLKVLEFLSHWGLINF 195
>04_04_0260 +
23996775-23996865,23997031-23997566,23998407-23998892,
23998989-23999152,23999220-23999281,23999753-23999907,
24000625-24000738,24001701-24002233,24002512-24002609,
24003108-24003398,24003764-24003830,24003905-24003983
Length = 891
Score = 80.2 bits (189), Expect = 9e-16
Identities = 39/95 (41%), Positives = 56/95 (58%), Gaps = 6/95 (6%)
Frame = +2
Query: 140 VPSYSAWFDYNSIHMIEKRALPEFFNGKN------KSKTPEIYLAYRNFMIDTYRLNPTE 301
+P+ S WF ++ IH E+RALPEFF G S+ P IY YR+++I YR + +
Sbjct: 26 IPASSGWFQWDEIHETERRALPEFFGGAGGSGFGTASRNPRIYREYRDYIISRYREDTSR 85
Query: 302 YLTSTASRRNLAGDVCAIMRVHGFLEQWGLINYQA 406
LT T R+ L GDV + ++ FL+ GLIN+ A
Sbjct: 86 RLTFTEVRKALVGDVTLLRKLFAFLDSSGLINFSA 120
>12_01_0490 +
3878436-3878466,3878559-3879113,3879218-3879777,
3880660-3880965,3881071-3881202,3881623-3881756,
3881939-3882015,3882084-3882226,3883376-3883633,
3884085-3884111
Length = 740
Score = 70.5 bits (165), Expect = 7e-13
Identities = 33/93 (35%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Frame = +2
Query: 134 IVVPSYSAWFDYNSIHMIEKRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTS 313
++VP +S WF ++H +E++ LP+FF+GK+ TPE Y+ RN +I TY P L
Sbjct: 189 LMVPKHSDWFLPMTVHRLERQVLPQFFSGKSPGHTPEKYIMLRNRVITTYLERPARRLAF 248
Query: 314 TASRRNLAG--DVCAIMRVHGFLEQWGLINYQA 406
+ + + ++ + R+ FL+ WG+INY A
Sbjct: 249 SECQGLVTSTPELYDLSRIVRFLDAWGIINYLA 281
>11_01_0532 +
4201374-4201401,4201475-4202652,4204316-4204670,
4204791-4204864,4206965-4207056,4207500-4207573,
4207680-4207822,4207889-4207909
Length = 654
Score = 65.3 bits (152), Expect = 3e-11
Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Frame = +2
Query: 158 WFDYNSIHMIEKRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTSTASRRNLA 337
WF +H +E++ +P+FF+GK+ TPE Y+ RN +I Y NP++ L + +A
Sbjct: 218 WFSPGIVHRLERQVVPQFFSGKSPGNTPEKYMLLRNKVIAKYLENPSKRLAFAECQGLVA 277
Query: 338 --GDVCAIMRVHGFLEQWGLINYQA 406
++ + R+ FL+ WG+INY A
Sbjct: 278 NTAELYDLSRIVRFLDTWGIINYLA 302
>03_02_1011 +
13198641-13198899,13199471-13199604,13199805-13199934,
13200290-13200450,13200587-13200688,13200786-13200890,
13200965-13201093,13201180-13201320,13201855-13201955,
13202300-13202357,13202656-13202943
Length = 535
Score = 31.1 bits (67), Expect = 0.53
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2
Query: 41 DDSQGKHSDSNTQEMLTKEELEDNVTDQTHH 133
DDSQG D + L KEE ED + D H
Sbjct: 171 DDSQGAFEDKHATAKLLKEEEEDGLRDLVRH 201
>08_02_1623 - 28314402-28315094
Length = 230
Score = 30.3 bits (65), Expect = 0.93
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +2
Query: 8 AATP--APPLDTHDDSQGKHSDSNTQEMLTKEELEDN 112
AATP A P T+DDS S ++ Q++ T +L+D+
Sbjct: 123 AATPSVATPCSTNDDSNNSSSTTHQQQLTTMLQLDDD 159
>11_06_0561 -
24984960-24985205,24985283-24985354,24985906-24985977,
24986612-24986782,24987464-24987653,24987733-24987976,
24988162-24988474,24988687-24989517,24989628-24989672,
24989677-24989790,24989877-24990371,24990627-24990824,
24990902-24991357
Length = 1148
Score = 28.7 bits (61), Expect = 2.8
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 321 PGATSPAMSAP*CVSTASSNSGASLTTKLE 410
P T PA SAP +TA S+ A+ TTKL+
Sbjct: 125 PRRTVPAQSAPGGPATAQSSPRAATTTKLD 154
>02_01_0395 +
2869748-2870045,2870450-2870571,2871700-2871777,
2871886-2872470,2872917-2873657,2873794-2873868
Length = 632
Score = 28.7 bits (61), Expect = 2.8
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +2
Query: 98 ELEDNVTDQTHHIVVPSYSAWFDYNSIHMIEKRALPEFFNGKNKSK 235
+LE + +DQ + + +++H I +R P+F++ +N SK
Sbjct: 221 KLETSSSDQCRERTIQEFKDHSSQDTVHPILRRLPPKFYSPRNDSK 266
>01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755
Length = 482
Score = 28.7 bits (61), Expect = 2.8
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +3
Query: 321 PGATSPAMSAP*C-VSTASSNSGASLTTKLEAESRPTAMGPP-PTSHFHV 464
PG + P +S+P + T+S+ +G S +++ AES A PP P H V
Sbjct: 328 PGESDPRVSSPPTRMRTSSAGAGDSHSSRDVAESTSCAESPPIPQMHSRV 377
>05_01_0131 + 888247-888771,889092-889154
Length = 195
Score = 28.3 bits (60), Expect = 3.7
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3
Query: 438 PPPTSHFHVLSDTPSGLQPL 497
PPP S F VL + PSG P+
Sbjct: 110 PPPLSEFPVLREVPSGPDPI 129
Score = 28.3 bits (60), Expect = 3.7
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3
Query: 438 PPPTSHFHVLSDTPSGLQPL 497
PPP S F VL + PSG P+
Sbjct: 137 PPPLSEFPVLREVPSGPDPI 156
>10_03_0034 +
7257033-7257045,7257074-7257104,7257880-7258009,
7258423-7258751,7259923-7260026,7260138-7260476,
7261074-7261199,7261366-7261489,7261615-7261723,
7262171-7262251
Length = 461
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -1
Query: 346 DIAGEVAPGRRTRQVLGRVQPVRVYHEVSVS*IYFGSFRFILP 218
+I + AP +R R RV+P Y + +S ++GS ++ P
Sbjct: 301 EIRAKEAPSKRQRPF--RVEPASTYPNLGMSPEWYGSLEWVFP 341
>02_05_1245 + 35223504-35224778
Length = 424
Score = 27.5 bits (58), Expect = 6.5
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Frame = -1
Query: 421 RDSASSLVVN-EAPLFEEAVDTHYGA-DIAGEVAPGRRTRQVLG 296
R SAS+++V+ + P + H+GA D+AGE+ RR R++ G
Sbjct: 240 RLSASTVLVSGDGPTLRAKI-AHFGAADLAGELLGDRRGRRIEG 282
>02_01_0269 +
1788788-1789508,1789629-1789658,1790127-1790368,
1790595-1790803,1791924-1792182
Length = 486
Score = 27.5 bits (58), Expect = 6.5
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Frame = -1
Query: 352 GADIAGEVAPGRRTRQVLGRVQPVRVYHEVSVS*IY----FGSFRFILPVEEL 206
GA AG APG T VL R H + +Y GS RF++PV EL
Sbjct: 95 GAGAAGREAPGDLTLVVLLGWLGARQKHLRRYADLYRDRGVGSVRFVVPVREL 147
>12_02_0702 -
22278513-22278751,22279054-22279889,22279932-22279975,
22280350-22280463
Length = 410
Score = 27.1 bits (57), Expect = 8.7
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +3
Query: 357 CVSTASSNSGASLTTK---LEAESRPTAMGPPPTSHFHVLSDTPS 482
C S A+ + A++ T L+A S PT M PPP + L+ P+
Sbjct: 121 CRSKATEVTIAAIRTTTAILKASSSPTPMAPPPPTPTKCLTKCPN 165
>11_08_0035 - 27838495-27838655,27838750-27838897,27838987-27839192,
27839291-27839972,27840074-27840247,27840963-27841181,
27841281-27841400,27841540-27841680,27841762-27841801,
27841969-27842129,27842506-27842589,27842659-27842721,
27842808-27842885,27842980-27842984,27843228-27843313,
27843354-27843544,27844089-27844166,27844255-27844365,
27844757-27844927,27845026-27845198,27845748-27845928
Length = 1090
Score = 27.1 bits (57), Expect = 8.7
Identities = 14/57 (24%), Positives = 26/57 (45%)
Frame = +2
Query: 20 APPLDTHDDSQGKHSDSNTQEMLTKEELEDNVTDQTHHIVVPSYSAWFDYNSIHMIE 190
A LD DD + + E ++ +D+V ++T + Y+A SI ++E
Sbjct: 968 AEDLDDDDDDEEEEDTDEDDEDYNQDSDDDDVREETEEEFLQRYAAAAGGESIEIVE 1024
>09_06_0147 + 21195222-21195377,21195471-21195522,21196842-21204362,
21204453-21205031,21205176-21205484,21205638-21205718,
21205971-21206279,21207430-21207816,21207964-21208767,
21208856-21209218,21209437-21209667,21209934-21210278,
21210494-21210712,21210759-21210815,21210978-21211322,
21211538-21211756,21211803-21211859,21212022-21212366,
21212584-21212814,21213100-21213458
Length = 4322
Score = 27.1 bits (57), Expect = 8.7
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = +3
Query: 366 TASSNSGASLTTKLEAESRPTAMGPPPTSHFHVLSDTPSGLQ 491
T SSN LT A+ PT+ PP S V + TPS Q
Sbjct: 2675 TKSSNDVLDLTPA-GADVHPTSSTEPPRSALPVQAQTPSATQ 2715
>05_04_0123 + 18210069-18213737
Length = 1222
Score = 27.1 bits (57), Expect = 8.7
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +2
Query: 47 SQGKHSDSNTQEMLTKEELEDNVTDQTHHIVVPSYSAWFDYNSIHM 184
SQG T KE LE TD H++ +S+W +H+
Sbjct: 919 SQGSLERKKTLIYHYKENLE-GTTDSKDHVLAHHFSSWGSLTKLHL 963
>05_03_0475 +
14486969-14487140,14487215-14487338,14487424-14487559,
14487663-14488997
Length = 588
Score = 27.1 bits (57), Expect = 8.7
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 324 GATSPAMSAP*CVSTASSNSGASLTTKLEAESRPTAMGPPP 446
G +SP +AP C A++ GA+ + + S P A P P
Sbjct: 282 GTSSPRSTAPACQQPAATRRGANSVAR--SGSTPRAASPSP 320
>04_04_0028 -
22243272-22243577,22244564-22244713,22244919-22245656,
22247233-22247331,22247541-22247933,22248806-22248961
Length = 613
Score = 27.1 bits (57), Expect = 8.7
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +3
Query: 399 TKLEAESRPTAMGPPPTSHFHVLSDTPSGLQPLIAR 506
T L+A + PT+ G PTS S T + QP R
Sbjct: 45 TPLDANAMPTSAGARPTSASPTFSGTGTDRQPSTGR 80
>01_06_1741 +
39581656-39581680,39582627-39582697,39582779-39582898,
39583034-39583094,39583186-39583242,39583413-39583600,
39583747-39583818,39583953-39584180
Length = 273
Score = 27.1 bits (57), Expect = 8.7
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -1
Query: 199 GAFLYHMYRVIIEPGRIRRHHDVVGLV 119
G F YH+ ++ +EPG + + V G V
Sbjct: 24 GEFYYHISQIALEPGELNENVQVFGEV 50
>01_06_0565 +
30287253-30287502,30287522-30289010,30289133-30289277,
30289679-30289729
Length = 644
Score = 27.1 bits (57), Expect = 8.7
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = +3
Query: 321 PGATSPAMSAP*CVSTASSNSGASLTTKLEAESRPTAMGPPPTSHFHVLSDTPSG 485
PG+ + S P C + S +SG S TT S T PP+ TP G
Sbjct: 401 PGSGGYSPSTP-CSAPPSPSSGTSPTTPGGGYSPSTPCNAPPSPSSDTSPTTPGG 454
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,814,047
Number of Sequences: 37544
Number of extensions: 353717
Number of successful extensions: 1326
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1320
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1083123860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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