Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_G16
(571 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0862 + 11886576-11886624,11886789-11887354 36 0.017
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095... 32 0.37
05_07_0102 + 27700395-27700426,27701034-27702087,27703205-27703420 31 0.49
03_01_0389 + 3021849-3022136,3022237-3022753,3022835-3022988,302... 31 0.85
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 30 1.5
02_03_0255 - 16911123-16911151,16911320-16911494 30 1.5
01_05_0056 + 17693332-17693603,17694298-17694520,17695420-176956... 30 1.5
11_04_0161 - 14270233-14271747 29 2.0
07_03_0726 - 20997549-20997620,20998283-20998372 29 2.0
06_03_1210 + 28442253-28442967,28443338-28443405 29 2.0
06_01_0866 + 6582131-6583294 29 2.0
04_04_0671 - 27157692-27158620,27158711-27158828,27158967-271591... 29 2.6
09_06_0107 + 20907560-20908491,20908511-20908625,20908967-209090... 29 3.4
09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817 29 3.4
06_03_0867 + 25534760-25539620,25540662-25540857,25540957-255411... 29 3.4
01_06_1140 - 34836967-34836996,34837107-34838771 29 3.4
01_01_1107 + 8756514-8756981 29 3.4
07_01_0909 - 7659790-7660039,7661328-7661338 28 4.6
03_02_0177 - 6185091-6185355,6185468-6185524,6185725-6186089,618... 28 4.6
02_01_0364 + 2615056-2615239,2615573-2615637,2616016-2616103,261... 28 4.6
02_01_0359 + 2578038-2578221,2578555-2578619,2583179-2583266,258... 28 4.6
10_08_0223 - 15986763-15987575 28 6.0
08_02_0672 - 19904353-19904839,19905646-19905704,19906137-199063... 28 6.0
04_04_0599 - 26516854-26517452,26517547-26517963,26518044-265183... 28 6.0
03_06_0347 + 33293915-33294104,33295143-33295284,33295365-332954... 28 6.0
03_05_0521 + 25160245-25160883 28 6.0
03_02_0854 - 11789850-11790524,11790602-11791063,11793119-11793328 28 6.0
11_06_0557 - 24955837-24956214,24957225-24957395,24957576-249576... 27 8.0
07_03_0486 - 18634813-18635168,18635258-18638726 27 8.0
06_03_1509 - 30663302-30663416,30663516-30663889 27 8.0
06_01_0437 + 3101449-3101521,3101872-3102232,3103766-3103958,310... 27 8.0
06_01_0145 + 1092764-1093351 27 8.0
05_05_0334 + 24156532-24156565,24156681-24156782,24157145-241572... 27 8.0
04_04_0991 - 29969162-29969912,29970097-29970368 27 8.0
>03_02_0862 + 11886576-11886624,11886789-11887354
Length = 204
Score = 36.3 bits (80), Expect = 0.017
Identities = 29/101 (28%), Positives = 39/101 (38%), Gaps = 2/101 (1%)
Frame = -3
Query: 302 AGRSAGDQPRSVPRLDKPSRRGTTSKGLLK--PGGASPAGGTVTGWRGIPNNSSRRAFGC 129
AG S G P S+PRL PSRR ++ G S GG V G G +
Sbjct: 34 AGGSGGKNP-SLPRLSAPSRRDVDGATPMRYPTAGRSGGGGAVWGGGGSGTPMAGSGAAA 92
Query: 128 NNCGWSANGSASCIVILNGSGGGHPRQRVESDLWKKACARP 6
G + G+A+ + +GGG S W+ P
Sbjct: 93 RPGGGARQGAATVARRRDAAGGGGGGPAAGSGTWQGGGGTP 133
>10_08_0940 -
21708557-21708733,21709058-21709142,21709330-21709551,
21710640-21710815,21711883-21711946,21712433-21712507,
21715114-21715199,21715297-21716715
Length = 767
Score = 31.9 bits (69), Expect = 0.37
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = -3
Query: 290 AGDQPRSVPRLDKPSRR--GTTSKGLLKPGGASPAGGTVTGWRGIPNNSSRRAFGCNNCG 117
A D+ R + SRR G + GG +G V WR +P+++ + FG N
Sbjct: 20 AADEERELVSCSSSSRRRGGLGVAVAARGGGGGGSGSCVVDWRTLPDDTVLQLFGRLNYR 79
Query: 116 WSANGSASC 90
A+ +A+C
Sbjct: 80 DRASMAAAC 88
>05_07_0102 + 27700395-27700426,27701034-27702087,27703205-27703420
Length = 433
Score = 31.5 bits (68), Expect = 0.49
Identities = 28/82 (34%), Positives = 32/82 (39%)
Frame = -3
Query: 308 ADAGRSAGDQPRSVPRLDKPSRRGTTSKGLLKPGGASPAGGTVTGWRGIPNNSSRRAFGC 129
A A RS G PR RG G GG P GG G RG ++ RR G
Sbjct: 6 AAAERSGGGNPRGG---GGGGPRGCGGGGPRSGGGGGPRGGGGGGPRGSGSSKPRRGDGG 62
Query: 128 NNCGWSANGSASCIVILNGSGG 63
CG G S + + G GG
Sbjct: 63 LGCG---RGDDSDLGLGYGGGG 81
>03_01_0389 +
3021849-3022136,3022237-3022753,3022835-3022988,
3023076-3023166,3024556-3024627,3026366-3026689
Length = 481
Score = 30.7 bits (66), Expect = 0.85
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 94 LALSY*TDPVEGIRGRGSSPIFGRKRVRGLV 2
++L Y P+ G+ GS P+FG+K R L+
Sbjct: 446 VSLGYQAPPLGGLYSNGSGPLFGQKSARSLL 476
>04_03_0018 -
9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 7/56 (12%)
Frame = +2
Query: 296 APRPLRQITTTLSPEMNH--RICHVRRM-LQLKWTLTPMPNT--CPI--QIPTMRG 442
AP+ L Q+ TTL+P+ +H + ++ +M +L+W + P+P T C I ++P G
Sbjct: 162 APKELLQMLTTLNPQPSHLRYLQYICKMDDELEWPIQPIPFTLDCVILREVPNFDG 217
>02_03_0255 - 16911123-16911151,16911320-16911494
Length = 67
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 4/36 (11%)
Frame = -3
Query: 140 AFGC---NNCGWS-ANGSASCIVILNGSGGGHPRQR 45
A GC N+ W+ A G ASC ++GS GHPR+R
Sbjct: 7 ATGCDDDNDGAWTIAMGFASCWPRVHGSAVGHPRER 42
>01_05_0056 +
17693332-17693603,17694298-17694520,17695420-17695668,
17695771-17695824
Length = 265
Score = 29.9 bits (64), Expect = 1.5
Identities = 24/81 (29%), Positives = 37/81 (45%)
Frame = -3
Query: 416 DTYSASVSTSILVGASFAHDRSCGSSLVRVWL*FGGADAGRSAGDQPRSVPRLDKPSRRG 237
D++ + V T I +G H C W ++ G + +QPR + L KP R+G
Sbjct: 120 DSHESKVITGI-IGGIIGHYCCCNGD---TW----SSELGVLSDEQPRLITTL-KPVRKG 170
Query: 236 TTSKGLLKPGGASPAGGTVTG 174
T L+ A+ AGG + G
Sbjct: 171 TNGGVTLQGLLAATAGGLIIG 191
>11_04_0161 - 14270233-14271747
Length = 504
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = -3
Query: 197 PAGGTVTGWRGIPNNSSRRAFGC--NNCGWSA 108
PAGG V W + RA GC +CGW++
Sbjct: 350 PAGGMVVEWCSQARVLAHRAVGCFVTHCGWNS 381
>07_03_0726 - 20997549-20997620,20998283-20998372
Length = 53
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +1
Query: 289 ALRPASAPPNHNHTLTRDEPQDLSCAKDAPTKMDVDTDAEYVSD 420
A+ PA++ H L D QD+ C KD +M + + Y SD
Sbjct: 10 AMWPANSLGPRQHNLLADREQDIFCGKDLSVEM-MSINGSYRSD 52
>06_03_1210 + 28442253-28442967,28443338-28443405
Length = 260
Score = 29.5 bits (63), Expect = 2.0
Identities = 24/81 (29%), Positives = 31/81 (38%), Gaps = 7/81 (8%)
Frame = -3
Query: 251 PSRRGTTSKGLLKPGGASPAGGTVTGWRGIPNNSSRRAFGCNNCGWSANGSASCI----- 87
P + + K LL GG A T R +P S R +G C + A G C
Sbjct: 38 PGIQPSAGKELLARGGFQLAPNRATSIR-LPAGWSGRVWGRQGCSFDAAGRGRCATGDCG 96
Query: 86 --VILNGSGGGHPRQRVESDL 30
+ NG+GG P E L
Sbjct: 97 GALYCNGAGGAPPATLAEITL 117
>06_01_0866 + 6582131-6583294
Length = 387
Score = 29.5 bits (63), Expect = 2.0
Identities = 19/82 (23%), Positives = 28/82 (34%)
Frame = -3
Query: 251 PSRRGTTSKGLLKPGGASPAGGTVTGWRGIPNNSSRRAFGCNNCGWSANGSASCIVILNG 72
P G S G+ GG T +RG+P+ F G + G
Sbjct: 265 PPGGGGESIWTFPQSGSGGGGGAATVYRGVPSGLHFMNFPATPMALLPGGQQLGLAGAGG 324
Query: 71 SGGGHPRQRVESDLWKKACARP 6
G GHP + ++ A+P
Sbjct: 325 GGEGHPGILAALNAYRAQAAQP 346
>04_04_0671 -
27157692-27158620,27158711-27158828,27158967-27159156,
27159281-27159415,27159537-27159634,27160034-27160206,
27160299-27160772,27161464-27161518
Length = 723
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -3
Query: 401 SVSTSILVGASFAHDRSCGSSLVRVWL*FGGADA 300
+++ LVGASFA D GS +V +W F G A
Sbjct: 648 AMAVPFLVGASFAIDMCAGSLVVFLWHRFDGKRA 681
>09_06_0107 +
20907560-20908491,20908511-20908625,20908967-20909058,
20909293-20909556,20910714-20911494
Length = 727
Score = 28.7 bits (61), Expect = 3.4
Identities = 15/50 (30%), Positives = 19/50 (38%)
Frame = +1
Query: 166 PRQPVTVPPAGDAPPGFNNPLEVVPRRLGLSNRGTDRGWSPALRPASAPP 315
P+ P + PP PP PL P + + SP L P PP
Sbjct: 76 PQTPPSPPPPPPPPPPPPPPLSPTPTTTSWTTNSSSISASPILPPPPPPP 125
>09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817
Length = 883
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1
Query: 163 MPRQPVTVPPAGDAPPGF 216
+P PVT PPA D PPGF
Sbjct: 463 VPTPPVTAPPA-DVPPGF 479
>06_03_0867 +
25534760-25539620,25540662-25540857,25540957-25541104,
25541673-25541751,25542151-25542238,25542330-25542600,
25542676-25542718,25542801-25542904,25543374-25543790
Length = 2068
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/51 (31%), Positives = 20/51 (39%)
Frame = +1
Query: 175 PVTVPPAGDAPPGFNNPLEVVPRRLGLSNRGTDRGWSPALRPASAPPNHNH 327
P PP PP + LE P G RG +SP +P +H H
Sbjct: 87 PAPTPPPPPPPPLPQHRLEPPPPHYGFPPRGHPDAYSPPPYHDPSPHHHYH 137
>01_06_1140 - 34836967-34836996,34837107-34838771
Length = 564
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -3
Query: 389 SILVGASFAHDRSCGSSLVRVWL*FGGAD-AGRSAGDQPR 273
++ + AHD C S+++R L FG AD A R G+ PR
Sbjct: 125 ALALRCGLAHDLFCASAMLRSCLRFGLADHARRLFGELPR 164
>01_01_1107 + 8756514-8756981
Length = 155
Score = 28.7 bits (61), Expect = 3.4
Identities = 19/48 (39%), Positives = 19/48 (39%)
Frame = -3
Query: 308 ADAGRSAGDQPRSVPRLDKPSRRGTTSKGLLKPGGASPAGGTVTGWRG 165
A A R G R RG G GG S G TVTGWRG
Sbjct: 41 AHARRRVGIGQRRCEVASGGGGRGGPRGGPRGGGGWSTGGTTVTGWRG 88
>07_01_0909 - 7659790-7660039,7661328-7661338
Length = 86
Score = 28.3 bits (60), Expect = 4.6
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = -3
Query: 275 RSVPRLDKPSRRGTTSKGLLKPGGASPAGGTVTGWRGI--PNNSSRRAFGCN 126
+SVPR + +RG +G +PG + GG G++G P + S+ GC+
Sbjct: 3 KSVPR--RGGQRGQFHQGNGRPGNSQGIGGGPRGFQGSGRPGSGSQGGGGCS 52
>03_02_0177 -
6185091-6185355,6185468-6185524,6185725-6186089,
6186180-6186332,6186422-6186655,6190532-6190978,
6191549-6191652,6192240-6192351
Length = 578
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -3
Query: 365 AHDRSCGSSLVRVWL*FGGADAGRSAGDQPRSVP 264
A +R + L WL FGG + G AG P S P
Sbjct: 493 AENRWYFTCLPLAWLRFGGLEQGTLAGSAPSSAP 526
>02_01_0364 +
2615056-2615239,2615573-2615637,2616016-2616103,
2616202-2616269,2616653-2616703,2617168-2617285,
2617463-2617509,2617603-2617629,2617806-2617881,
2618157-2618296,2618623-2618721
Length = 320
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -3
Query: 284 DQPRSVPRLDKPSRRGTTSKGLLKPGGASPAGGTVTGWRGIPN 156
++P DKP +R T K L+KP S A VTG + P+
Sbjct: 68 EKPTMESNQDKPPKRSTPKKKLVKPPSGSNA-SKVTGPKAGPD 109
>02_01_0359 +
2578038-2578221,2578555-2578619,2583179-2583266,
2583365-2583432,2583816-2583866,2584331-2584448,
2584626-2584672,2584766-2584792,2584969-2585044,
2585320-2585483
Length = 295
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -3
Query: 284 DQPRSVPRLDKPSRRGTTSKGLLKPGGASPAGGTVTGWRGIPN 156
++P DKP +R T K L+KP S A VTG + P+
Sbjct: 68 EKPTMESNQDKPPKRSTPKKKLVKPPSGSNA-SKVTGPKAGPD 109
>10_08_0223 - 15986763-15987575
Length = 270
Score = 27.9 bits (59), Expect = 6.0
Identities = 24/87 (27%), Positives = 33/87 (37%), Gaps = 3/87 (3%)
Frame = -3
Query: 311 GADAGRSAGDQPRSVPRLDKPSRRGTTSKGLLKPGGASPAGGTVTGWRGIPNNSSRRAFG 132
GA G+ AG+ S+ PS G + G G GG G G P S G
Sbjct: 157 GAGVGQGAGESGSSIAMAPSPSSGGDYNGGYADAAGGGGGGG--GGHGGGPAASPSYGVG 214
Query: 131 C---NNCGWSANGSASCIVILNGSGGG 60
+ G + + +S +G GGG
Sbjct: 215 AGAGSGAGDAGSDGSSGGGYASGMGGG 241
>08_02_0672 -
19904353-19904839,19905646-19905704,19906137-19906352,
19906845-19907422,19907506-19908180,19908263-19908653,
19909469-19909621,19909727-19909980,19911023-19911479
Length = 1089
Score = 27.9 bits (59), Expect = 6.0
Identities = 24/75 (32%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Frame = +1
Query: 160 GMPRQPVTVPPAGDA-PPGFNNPLEVVPRRLGLSNRGTDRGWSPALRPASAPPNHNHTLT 336
GMPR P P PP P+ V+P + G RG P + P + PP T
Sbjct: 153 GMPRYPGPYPMMRPGFPPRPMPPVGVMPLQRPPIIPGI-RGAPPVVPPTARPPTPAVTPP 211
Query: 337 RDEPQDLSCAKDAPT 381
P + K APT
Sbjct: 212 DKPPTAVYVGKIAPT 226
>04_04_0599 -
26516854-26517452,26517547-26517963,26518044-26518394,
26518651-26518748,26518875-26518945,26519638-26520318
Length = 738
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -3
Query: 422 ESDTYSASVSTSILVGASFAHDRSCGSSLVR 330
E+ TY+AS SI V D +CGS L+R
Sbjct: 265 ENQTYTASDEDSIAVVLKAGMDINCGSFLIR 295
>03_06_0347 +
33293915-33294104,33295143-33295284,33295365-33295485,
33295590-33295652,33296524-33296553,33297411-33297905
Length = 346
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -3
Query: 122 CGWSANGSASCIVILNGSGGGHPRQRVESDLWKKACA 12
CG SA A C ++NG+ G R+ V + CA
Sbjct: 256 CGLSAQLPALCCQVINGASCGASRRGVRPSFIRSHCA 292
>03_05_0521 + 25160245-25160883
Length = 212
Score = 27.9 bits (59), Expect = 6.0
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = -3
Query: 314 GGADAGRSAGDQPRSVPRLDKPSRRGTTSKGLLKPGGASPAGGTVTGWRG 165
GG D GRS G + R RL +P TT G + G + G + G G
Sbjct: 102 GGGDGGRSRGRERR---RLPEPEEGATTVAGAWE-GRGNGGGSRIQGMGG 147
>03_02_0854 - 11789850-11790524,11790602-11791063,11793119-11793328
Length = 448
Score = 27.9 bits (59), Expect = 6.0
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = -3
Query: 314 GGADAGRSAGDQPRSVPRLDKPSRRGTTSKGLLKPGGASPAGG 186
G A AGR AG PR R RRG +++ + G P G
Sbjct: 17 GHAGAGRGAGWAPRRRDRRRGGPRRGRSTRASSRRGRRRPRSG 59
>11_06_0557 -
24955837-24956214,24957225-24957395,24957576-24957635,
24958419-24958623,24958710-24958953,24959103-24959394,
24959734-24960828,24960915-24961409,24961665-24961823,
24961893-24962387
Length = 1197
Score = 27.5 bits (58), Expect = 8.0
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = -3
Query: 314 GGADAGRSAGDQPRSVPRLDKPSRRGTTSKGLLKPGGASPAGGTVTGWR-GIP 159
GGAD G S + S P +G G + GG S GG T R G P
Sbjct: 48 GGADGG-SPASRAASPPPPTAAGGQGGVGGGPVSGGGGSAPGGAATAQREGAP 99
>07_03_0486 - 18634813-18635168,18635258-18638726
Length = 1274
Score = 27.5 bits (58), Expect = 8.0
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = -3
Query: 191 GGTVTGWRGIPNNSSRRAFGCNNCGWSANGSASCIVILNGSGGG 60
GG + GW G NSS AF C+ G + + + + LN SG G
Sbjct: 48 GGVLAGWGGGGGNSS--AF-CSWAGVECDAAGARVTGLNLSGAG 88
>06_03_1509 - 30663302-30663416,30663516-30663889
Length = 162
Score = 27.5 bits (58), Expect = 8.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 113 TSHSYCNRMRAARSCSVC 166
T +YCNR + RSC+ C
Sbjct: 128 TKWTYCNRCSSTRSCTTC 145
>06_01_0437 +
3101449-3101521,3101872-3102232,3103766-3103958,
3104051-3104848,3104997-3105143,3106024-3106377
Length = 641
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -2
Query: 336 GESVVVIWRSGRGAQRRRPTPISTA 262
G +WR GR A RRR P ++A
Sbjct: 42 GPRTCAVWRRGRAAVRRRRLPAASA 66
>06_01_0145 + 1092764-1093351
Length = 195
Score = 27.5 bits (58), Expect = 8.0
Identities = 22/75 (29%), Positives = 26/75 (34%), Gaps = 3/75 (4%)
Frame = -3
Query: 317 FGGADAGRSAGDQPRSVPRLDKPSRRGTTSKGLLKPGGASPAGGTVT---GWRGIPNNSS 147
FGG +P +P RG +G GG AGG + G RG
Sbjct: 5 FGGEFPVDDQPGEPGQPGEPGQPGGRGRGGRG--GRGGRGGAGGRLGVRHGRRGRRGGGG 62
Query: 146 RRAFGCNNCGWSANG 102
R GC GW G
Sbjct: 63 ARGQGCVGVGWYGGG 77
>05_05_0334 + 24156532-24156565,24156681-24156782,24157145-24157274,
24157361-24157445,24157525-24157666,24157762-24157894,
24157993-24158254,24158331-24158519,24158596-24158721,
24158809-24159195,24159288-24159398,24159629-24160423,
24161114-24161255,24161350-24162518,24162609-24162818,
24163010-24163478,24164037-24164464
Length = 1637
Score = 27.5 bits (58), Expect = 8.0
Identities = 26/78 (33%), Positives = 29/78 (37%), Gaps = 5/78 (6%)
Frame = -3
Query: 251 PSRRGTTSKGLLKPGGASPAGGTV---TGWRGIPNNSSRRAFGCNNCGW--SANGSASCI 87
PS R + +K G GGT GWRG NN R F + G S N S
Sbjct: 1450 PSMRNVAAMVPMKSSGWGNGGGTGGGNDGWRGDGNNDRDRPFSGRSGGRFDSRNSSGG-- 1507
Query: 86 VILNGSGGGHPRQRVESD 33
G G G R SD
Sbjct: 1508 ---RGRGRGRGRGNFGSD 1522
>04_04_0991 - 29969162-29969912,29970097-29970368
Length = 340
Score = 27.5 bits (58), Expect = 8.0
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = -3
Query: 191 GGTVTGWRGIPNNSSRRAFGCNNCGWS 111
GG V WRG+P RA G N CG S
Sbjct: 34 GGHVGSWRGLP-----RAAGLNRCGKS 55
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.130 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,585,215
Number of Sequences: 37544
Number of extensions: 499055
Number of successful extensions: 2146
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 2010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2140
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1317005676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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