Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_G16
(571 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70284-9|CAA94280.1| 290|Caenorhabditis elegans Hypothetical pr... 35 0.047
U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific ... 33 0.14
Z81592-2|CAB04726.1| 407|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z83235-2|CAB05773.2| 265|Caenorhabditis elegans Hypothetical pr... 31 0.58
AF456248-1|AAL59606.1| 265|Caenorhabditis elegans secreted 2-im... 31 0.58
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 29 1.8
Z78061-3|CAB60286.1| 662|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical pr... 29 2.4
U21323-2|AAM22051.1| 155|Caenorhabditis elegans Hypothetical pr... 29 2.4
U21323-1|AAM22050.1| 542|Caenorhabditis elegans Hypothetical pr... 29 2.4
AL117200-16|CAB60587.1| 662|Caenorhabditis elegans Hypothetical... 29 2.4
AF016682-4|AAB66185.1| 263|Caenorhabditis elegans Hypothetical ... 29 2.4
Z93393-3|CAB54438.2| 388|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z93393-2|CAB07689.2| 890|Caenorhabditis elegans Hypothetical pr... 29 3.1
U80838-2|AAL02517.1| 297|Caenorhabditis elegans Abnormal cell l... 29 3.1
U80838-1|AAU05570.1| 597|Caenorhabditis elegans Abnormal cell l... 29 3.1
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 29 3.1
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 29 3.1
AF039047-15|AAM15588.1| 1040|Caenorhabditis elegans Human mlk (m... 29 3.1
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 29 3.1
Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical pr... 28 4.1
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical... 28 4.1
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical... 28 4.1
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 28 4.1
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 28 5.4
U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1 prepropro... 28 5.4
AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical ... 28 5.4
AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical... 28 5.4
AF045642-2|AAC02580.1| 643|Caenorhabditis elegans Dynein chain,... 28 5.4
Z34533-2|CAA84296.1| 166|Caenorhabditis elegans Hypothetical pr... 27 7.2
AF039047-14|AAM15589.1| 978|Caenorhabditis elegans Human mlk (m... 27 7.2
AC087232-1|AAK09079.2| 574|Caenorhabditis elegans Hypothetical ... 27 7.2
Z81076-10|CAB03059.1| 394|Caenorhabditis elegans Hypothetical p... 27 9.5
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 27 9.5
CU457740-4|CAM36334.1| 735|Caenorhabditis elegans Hypothetical ... 27 9.5
AL132943-5|CAB81977.1| 367|Caenorhabditis elegans Hypothetical ... 27 9.5
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 27 9.5
AF047653-2|AAC04459.1| 388|Caenorhabditis elegans Hypothetical ... 27 9.5
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 27 9.5
>Z70284-9|CAA94280.1| 290|Caenorhabditis elegans Hypothetical
protein K07F5.11 protein.
Length = 290
Score = 34.7 bits (76), Expect = 0.047
Identities = 25/85 (29%), Positives = 34/85 (40%), Gaps = 1/85 (1%)
Frame = -3
Query: 311 GADAGRSAGDQPRSVPRLDKPSRRGTTSKGLLKPGGASPAGGTVTGWRGIPNN-SSRRAF 135
GA + G PR + T + + GGA T+T G P S+ A
Sbjct: 132 GASTMTAVGGAPRGASTMTAVGGAPTGASTMTAVGGAPGEASTMTAVGGAPRGASTMTAV 191
Query: 134 GCNNCGWSANGSASCIVILNGSGGG 60
G G SA G+A ++G GGG
Sbjct: 192 GAPGGGASALGAAPPAGSMSGGGGG 216
>U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific
family, class qprotein 2 protein.
Length = 405
Score = 33.1 bits (72), Expect = 0.14
Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 5/90 (5%)
Frame = -3
Query: 314 GGADAGRSA----GDQPRSVPRLDKPSRRGTTSKGLLKPGGASPAGGTVTGWRGIPNN-S 150
GGA +G S G PR + T + + G A T+T G P S
Sbjct: 244 GGAPSGASTMTAVGGAPRGASTMTAVGGAPTGASTMTAVGAAPGGASTMTAVGGAPRGAS 303
Query: 149 SRRAFGCNNCGWSANGSASCIVILNGSGGG 60
+ A G G SA G+A ++G GGG
Sbjct: 304 TMTAVGAPGGGASALGAAPPAGSMSGGGGG 333
>Z81592-2|CAB04726.1| 407|Caenorhabditis elegans Hypothetical
protein T16G1.2 protein.
Length = 407
Score = 32.7 bits (71), Expect = 0.19
Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Frame = +1
Query: 157 FGMPRQPVTVPPAGDAPPGFNNPLEVVPRRLGLSN-RGTDRGWSPALRPASAPPNHNHTL 333
F P+QPVT+ P G P P GL + G P + ++ PNHN
Sbjct: 281 FNQPQQPVTLTPLGTNP---------TPTIGGLQQPNSLNSGGLPQQQQSALSPNHNEE- 330
Query: 334 TRDEPQDLSCAKD 372
D P+ L C D
Sbjct: 331 KHDTPEQLGCGWD 343
>Z83235-2|CAB05773.2| 265|Caenorhabditis elegans Hypothetical
protein K10C3.3 protein.
Length = 265
Score = 31.1 bits (67), Expect = 0.58
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = +1
Query: 274 RGWSPALRPASAPPNHNHTLTRDEPQDLSCAKDAPTKMDVDTDAEYVSDSDSNDARLMPR 453
RG AL +A + NH L +P + CA D P + SD++ +A L P
Sbjct: 21 RGSKSALVLVAARSSENHPLHATDPITIWCAPDNPQVVIKTAHFIRSSDNEKLEAALNPT 80
Query: 454 KK 459
KK
Sbjct: 81 KK 82
>AF456248-1|AAL59606.1| 265|Caenorhabditis elegans secreted
2-immunoglobulin-domainprotein ZIG-1 protein.
Length = 265
Score = 31.1 bits (67), Expect = 0.58
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = +1
Query: 274 RGWSPALRPASAPPNHNHTLTRDEPQDLSCAKDAPTKMDVDTDAEYVSDSDSNDARLMPR 453
RG AL +A + NH L +P + CA D P + SD++ +A L P
Sbjct: 21 RGSKSALVLVAARSSENHPLHATDPITIWCAPDNPQVVIKTAHFIRSSDNEKLEAALNPT 80
Query: 454 KK 459
KK
Sbjct: 81 KK 82
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +1
Query: 160 GMPRQPVTVPPAGDAPPG 213
G+P PVTVPP PPG
Sbjct: 144 GLPCDPVTVPPCKPCPPG 161
>Z78061-3|CAB60286.1| 662|Caenorhabditis elegans Hypothetical
protein C48G7.3 protein.
Length = 662
Score = 29.1 bits (62), Expect = 2.4
Identities = 20/69 (28%), Positives = 30/69 (43%)
Frame = +1
Query: 340 DEPQDLSCAKDAPTKMDVDTDAEYVSDSDSNDARLMPRKKLHRHPHSMAMTAVTSLQDST 519
D D + D+ +MD D D + D + R K + R S +T QDS
Sbjct: 91 DSDSDRTAGGDSTCQMDSDEDDD--DDDEDEMIRWQTEKMMRRPLPSDRVTVKAWEQDSD 148
Query: 520 SQPSEFHTL 546
+ S+F+TL
Sbjct: 149 AGSSKFNTL 157
>Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical protein
C03D6.4 protein.
Length = 1390
Score = 29.1 bits (62), Expect = 2.4
Identities = 31/93 (33%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Frame = -3
Query: 368 FAHDRSCGSSLVRV-WL*FGGADAGRSAGDQPRSVPRLDKPSRRGTTSKGLLKPGGASPA 192
FA S G+S WL FGG G+Q + + KPS T+ G ++PA
Sbjct: 1227 FAPKTSTGTSASSSSWL-FGGG------GNQQQQ--QQQKPSFSFNTA-GSSAQQASAPA 1276
Query: 191 GGTVTGWRGIPNNSSRRAFGCNNCGWSANGSAS 93
GT + + G P S+ AFG G AN S
Sbjct: 1277 TGTSSVFGGAPKFGSQPAFGAKPFGGGANAGLS 1309
>U21323-2|AAM22051.1| 155|Caenorhabditis elegans Hypothetical
protein C45G9.6b protein.
Length = 155
Score = 29.1 bits (62), Expect = 2.4
Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = -3
Query: 257 DKPSRRGTTSKGLLKPGGASPAGGTVTGWRGIPNNSSRRAFGCNNCGWSANGSASCIVIL 78
+ P+ G G+ PGG GG G N+++ G C S NG C+
Sbjct: 35 NSPTYNGGIGGGVY-PGGGGNNGGVQRDEGGYCNSNTDCRSGLY-CTASVNGVKICLSTS 92
Query: 77 NGSGG-GHP 54
NG GG G P
Sbjct: 93 NGGGGNGFP 101
>U21323-1|AAM22050.1| 542|Caenorhabditis elegans Hypothetical
protein C45G9.6a protein.
Length = 542
Score = 29.1 bits (62), Expect = 2.4
Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = -3
Query: 257 DKPSRRGTTSKGLLKPGGASPAGGTVTGWRGIPNNSSRRAFGCNNCGWSANGSASCIVIL 78
+ P+ G G+ PGG GG G N+++ G C S NG C+
Sbjct: 35 NSPTYNGGIGGGVY-PGGGGNNGGVQRDEGGYCNSNTDCRSGLY-CTASVNGVKICLSTS 92
Query: 77 NGSGG-GHP 54
NG GG G P
Sbjct: 93 NGGGGNGFP 101
>AL117200-16|CAB60587.1| 662|Caenorhabditis elegans Hypothetical
protein C48G7.3 protein.
Length = 662
Score = 29.1 bits (62), Expect = 2.4
Identities = 20/69 (28%), Positives = 30/69 (43%)
Frame = +1
Query: 340 DEPQDLSCAKDAPTKMDVDTDAEYVSDSDSNDARLMPRKKLHRHPHSMAMTAVTSLQDST 519
D D + D+ +MD D D + D + R K + R S +T QDS
Sbjct: 91 DSDSDRTAGGDSTCQMDSDEDDD--DDDEDEMIRWQTEKMMRRPLPSDRVTVKAWEQDSD 148
Query: 520 SQPSEFHTL 546
+ S+F+TL
Sbjct: 149 AGSSKFNTL 157
>AF016682-4|AAB66185.1| 263|Caenorhabditis elegans Hypothetical
protein T07D3.5 protein.
Length = 263
Score = 29.1 bits (62), Expect = 2.4
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 10/70 (14%)
Frame = +1
Query: 142 RREELFGMPRQPVTVPPAGDAPPGFNNPLEVVPRR---LGLSNRGTDRGWSPALR----- 297
++E++ + + P V G PPG P EV+PR +G+SN G P L+
Sbjct: 120 KKEQMKTVYKIPPPVIIVG-RPPGHIPPTEVIPRSGGVVGMSNLGEGSTAPPYLKFPPVV 178
Query: 298 --PASAPPNH 321
P S PP H
Sbjct: 179 GPPISPPPRH 188
>Z93393-3|CAB54438.2| 388|Caenorhabditis elegans Hypothetical
protein Y48E1B.2b protein.
Length = 388
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/60 (25%), Positives = 24/60 (40%)
Frame = -3
Query: 245 RRGTTSKGLLKPGGASPAGGTVTGWRGIPNNSSRRAFGCNNCGWSANGSASCIVILNGSG 66
R+ ++ LL P G AGG +T W G + G + C ++L+ G
Sbjct: 246 RKWLGTRALLVPQGQEAAGGRMTSWPGFRGENGEMGRRFEMRGRLKDEGGCCDIVLSSIG 305
>Z93393-2|CAB07689.2| 890|Caenorhabditis elegans Hypothetical
protein Y48E1B.2a protein.
Length = 890
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/60 (25%), Positives = 24/60 (40%)
Frame = -3
Query: 245 RRGTTSKGLLKPGGASPAGGTVTGWRGIPNNSSRRAFGCNNCGWSANGSASCIVILNGSG 66
R+ ++ LL P G AGG +T W G + G + C ++L+ G
Sbjct: 748 RKWLGTRALLVPQGQEAAGGRMTSWPGFRGENGEMGRRFEMRGRLKDEGGCCDIVLSSIG 807
>U80838-2|AAL02517.1| 297|Caenorhabditis elegans Abnormal cell
lineage protein 42,isoform a protein.
Length = 297
Score = 28.7 bits (61), Expect = 3.1
Identities = 30/106 (28%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
Frame = +1
Query: 256 SNRGTDRGWSPALRPASAPPNHNHTLTRDEPQDLSCAKDAPTKMDVDTDAEYVSDSD-SN 432
S++ R +PA P PP N+ +T DL+ K TK DV+ A +S S S
Sbjct: 192 SSQNHYRTMAPAPPP---PPGKNYQITYTPLDDLTDQKSTNTKSDVENVAYPISGSKFST 248
Query: 433 DARLMPRKKLHRHPHSMAMTAVTSLQDSTSQPSEFHTLVNTACSIM 570
RL L P T S T+ P F +++ +M
Sbjct: 249 PMRLSIDGLL---PRGATSTGGASPTSGTNSPPVFPKTSSSSSLLM 291
>U80838-1|AAU05570.1| 597|Caenorhabditis elegans Abnormal cell
lineage protein 42,isoform b protein.
Length = 597
Score = 28.7 bits (61), Expect = 3.1
Identities = 30/106 (28%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
Frame = +1
Query: 256 SNRGTDRGWSPALRPASAPPNHNHTLTRDEPQDLSCAKDAPTKMDVDTDAEYVSDSD-SN 432
S++ R +PA P PP N+ +T DL+ K TK DV+ A +S S S
Sbjct: 492 SSQNHYRTMAPAPPP---PPGKNYQITYTPLDDLTDQKSTNTKSDVENVAYPISGSKFST 548
Query: 433 DARLMPRKKLHRHPHSMAMTAVTSLQDSTSQPSEFHTLVNTACSIM 570
RL L P T S T+ P F +++ +M
Sbjct: 549 PMRLSIDGLL---PRGATSTGGASPTSGTNSPPVFPKTSSSSSLLM 591
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 28.7 bits (61), Expect = 3.1
Identities = 23/68 (33%), Positives = 25/68 (36%), Gaps = 2/68 (2%)
Frame = -3
Query: 287 GDQPRSVPRLDKP--SRRGTTSKGLLKPGGASPAGGTVTGWRGIPNNSSRRAFGCNNCGW 114
G R P KP R G TS G GG + G G NN R C NC
Sbjct: 405 GHNSRDCPEERKPREGRNGFTS-GF---GGGNDGGFGGGNAEGFGNNEERGPMKCFNCKG 460
Query: 113 SANGSASC 90
+ SA C
Sbjct: 461 EGHRSAEC 468
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 28.7 bits (61), Expect = 3.1
Identities = 23/68 (33%), Positives = 25/68 (36%), Gaps = 2/68 (2%)
Frame = -3
Query: 287 GDQPRSVPRLDKP--SRRGTTSKGLLKPGGASPAGGTVTGWRGIPNNSSRRAFGCNNCGW 114
G R P KP R G TS G GG + G G NN R C NC
Sbjct: 405 GHNSRDCPEERKPREGRNGFTS-GF---GGGNDGGFGGGNAEGFGNNEERGPMKCFNCKG 460
Query: 113 SANGSASC 90
+ SA C
Sbjct: 461 EGHRSAEC 468
>AF039047-15|AAM15588.1| 1040|Caenorhabditis elegans Human mlk
(mixed lineage kinase)homolog protein 1, isoform a
protein.
Length = 1040
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -3
Query: 242 RGTTSKGLLKPGGASPAGGTVTGWRGIPNNSSR 144
RG ++ GLL+ G S A T GW PN + R
Sbjct: 699 RGASAAGLLEIGARSRAQSTADGWED-PNTTKR 730
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 28.7 bits (61), Expect = 3.1
Identities = 23/68 (33%), Positives = 25/68 (36%), Gaps = 2/68 (2%)
Frame = -3
Query: 287 GDQPRSVPRLDKP--SRRGTTSKGLLKPGGASPAGGTVTGWRGIPNNSSRRAFGCNNCGW 114
G R P KP R G TS G GG + G G NN R C NC
Sbjct: 405 GHNSRDCPEERKPREGRNGFTS-GF---GGGNDGGFGGGNAEGFGNNEERGPMKCFNCKG 460
Query: 113 SANGSASC 90
+ SA C
Sbjct: 461 EGHRSAEC 468
>Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical
protein ZK1010.5 protein.
Length = 756
Score = 28.3 bits (60), Expect = 4.1
Identities = 22/82 (26%), Positives = 33/82 (40%)
Frame = +1
Query: 205 PPGFNNPLEVVPRRLGLSNRGTDRGWSPALRPASAPPNHNHTLTRDEPQDLSCAKDAPTK 384
P NP VVP L S D +P + P + P + T +EP + + A PT
Sbjct: 279 PVVLTNPPVVVPV-LATSEEPNDTTAAPVM-PPNPPVGISGPATSEEPNNTTAAPTVPTD 336
Query: 385 MDVDTDAEYVSDSDSNDARLMP 450
+ V + + + ND P
Sbjct: 337 LPV-VFVDPATSQEPNDTTAAP 357
>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
protein Y57A10A.18b protein.
Length = 1459
Score = 28.3 bits (60), Expect = 4.1
Identities = 19/61 (31%), Positives = 25/61 (40%)
Frame = -3
Query: 242 RGTTSKGLLKPGGASPAGGTVTGWRGIPNNSSRRAFGCNNCGWSANGSASCIVILNGSGG 63
RG + +KPGG S A ++ W I N R N S + I NG+G
Sbjct: 1222 RGPSPPTAMKPGG-SDAPSSLWSWNTIGNLGDLRPPSSNEFNSSMDSFQKDIWAANGNGN 1280
Query: 62 G 60
G
Sbjct: 1281 G 1281
>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
protein Y57A10A.18a protein.
Length = 1456
Score = 28.3 bits (60), Expect = 4.1
Identities = 19/61 (31%), Positives = 25/61 (40%)
Frame = -3
Query: 242 RGTTSKGLLKPGGASPAGGTVTGWRGIPNNSSRRAFGCNNCGWSANGSASCIVILNGSGG 63
RG + +KPGG S A ++ W I N R N S + I NG+G
Sbjct: 1222 RGPSPPTAMKPGG-SDAPSSLWSWNTIGNLGDLRPPSSNEFNSSMDSFQKDIWAANGNGN 1280
Query: 62 G 60
G
Sbjct: 1281 G 1281
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 160 GMPRQPVTVPPAGDAPPGFNNP 225
G P +P + P GDAPPG + P
Sbjct: 194 GPPGEPGALLPGGDAPPGPSGP 215
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 27.9 bits (59), Expect = 5.4
Identities = 24/72 (33%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
Frame = -3
Query: 404 ASVSTSILVGASFAHDRSCGSSLVRVWL*FGGADAGRSAGDQPRSVPRLD-KPSRRGTTS 228
+S S+S G S D S SS GG DAG S+G + S S G S
Sbjct: 384 SSSSSSSSGGYSGGSDSSSSSSSSSGGYSSGGGDAGASSGGESSSAGGYSGSSSSGGEAS 443
Query: 227 KGLLKPGGASPA 192
G G + PA
Sbjct: 444 SGGYSGGSSEPA 455
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 27.9 bits (59), Expect = 5.4
Identities = 24/72 (33%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
Frame = -3
Query: 404 ASVSTSILVGASFAHDRSCGSSLVRVWL*FGGADAGRSAGDQPRSVPRLD-KPSRRGTTS 228
+S S+S G S D S SS GG DAG S+G + S S G S
Sbjct: 384 SSSSSSSSGGYSGGSDSSSSSSSSSGGYSSGGGDAGASSGGESSSAGGYSGSSSSGGEAS 443
Query: 227 KGLLKPGGASPA 192
G G + PA
Sbjct: 444 SGGYSGGSSEPA 455
>U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1
preproprotein protein.
Length = 1042
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = +2
Query: 92 KTHSHWQTSHSYCNRMRAARSCSVCRANPSPC 187
+ H+ H C+R ++ CR++ SPC
Sbjct: 472 RPHAQCAAHHKCCHRCELRKAGDTCRSSKSPC 503
>AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical
protein Y41C4A.5 protein.
Length = 373
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 160 GMPRQPVTVPPAGDAPPGFNNP 225
G P+ P VPP G PPG+ P
Sbjct: 285 GHPQYPYPVPPHGYYPPGYPYP 306
>AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical
protein Y37D8A.13 protein.
Length = 1042
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = +2
Query: 92 KTHSHWQTSHSYCNRMRAARSCSVCRANPSPC 187
+ H+ H C+R ++ CR++ SPC
Sbjct: 472 RPHAQCAAHHKCCHRCELRKAGDTCRSSKSPC 503
>AF045642-2|AAC02580.1| 643|Caenorhabditis elegans Dynein chain,
light intermediateprotein 1 protein.
Length = 643
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 217 NNPLEVVPRRLGLSNRGTDRGWSPALRPASAPPNH 321
+N +E + R++G+S T R SPA P S NH
Sbjct: 55 SNEVEDILRQVGISTEPTVREESPAPPPGSHSDNH 89
>Z34533-2|CAA84296.1| 166|Caenorhabditis elegans Hypothetical
protein B0285.3 protein.
Length = 166
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -3
Query: 215 KPGGASPAGGTVTGWRGIPNNSSRRAFGCNNCGWS 111
+P G GG GW+G N R N+ GWS
Sbjct: 20 RPQGRGRGGG---GWKGNDNRGGYRGGSSNDGGWS 51
>AF039047-14|AAM15589.1| 978|Caenorhabditis elegans Human mlk
(mixed lineage kinase)homolog protein 1, isoform b
protein.
Length = 978
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 242 RGTTSKGLLKPGGASPAGGTVTGWRGIPNNSSR 144
RG ++ GLL+ G S A T GW PN + +
Sbjct: 618 RGASAAGLLEIGARSRAQSTADGWED-PNTTKK 649
>AC087232-1|AAK09079.2| 574|Caenorhabditis elegans Hypothetical
protein Y92H12BR.7 protein.
Length = 574
Score = 27.5 bits (58), Expect = 7.2
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = +2
Query: 44 PSASDALHRIRLI*QCKTHSHWQTSHSYCN 133
P+A +H ++ +CK +W H CN
Sbjct: 254 PNAEPLMHEFCVVYRCKPKVYWDEIHHCCN 283
>Z81076-10|CAB03059.1| 394|Caenorhabditis elegans Hypothetical
protein F35C5.9 protein.
Length = 394
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -3
Query: 359 DRSCGSSLVRVWL 321
DRSCGS L R+WL
Sbjct: 43 DRSCGSDLSRLWL 55
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +1
Query: 142 RREELFGMPRQPVTVPPAGDAPPGFNNPLEVVPRRLGLSNRGTDRGWSP 288
RR+E G R VP + NP+ VVP + + GTD W P
Sbjct: 254 RRDEKSGQYRNGTAVPQQTQVYDAYGNPV-VVP--VDKNIYGTDHPWGP 299
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 27.1 bits (57), Expect = 9.5
Identities = 21/71 (29%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Frame = -3
Query: 251 PSRRGTTSKGLLKPG--GASPAGGTVTGWRGIPNNSSRRAFGCNNCGWSANGSASCIVIL 78
P G G PG G+ P G G G+P + + A G G +G +
Sbjct: 279 PGMPGAFPPGQGGPGMPGSFPPGAPGPGGPGMPGSFAPGAPGPGGPGGYPSGGPGMPGMQ 338
Query: 77 NGSGGGHPRQR 45
G GG P+QR
Sbjct: 339 GGYPGGPPQQR 349
>CU457740-4|CAM36334.1| 735|Caenorhabditis elegans Hypothetical
protein C50E10.4 protein.
Length = 735
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = +1
Query: 283 SPALRPASAPPNHNHTLTRDEPQDLSCAKDAPTKMDVDTDAEYVSDSDSNDAR 441
+PA +P + P + +P+D A++ +M+VD DA + ++ R
Sbjct: 377 TPAAQPRKSLPRR--AAEKKKPEDSDAAEEQEVEMEVDNDASTSTPRNARGGR 427
>AL132943-5|CAB81977.1| 367|Caenorhabditis elegans Hypothetical
protein Y116F11B.8 protein.
Length = 367
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/47 (34%), Positives = 19/47 (40%)
Frame = +1
Query: 175 PVTVPPAGDAPPGFNNPLEVVPRRLGLSNRGTDRGWSPALRPASAPP 315
PVT P PP P+E P G S+ T +P PA P
Sbjct: 196 PVTSLPPPTDPPSTLGPMETPPNSPGTSSAATTS--APVTSPAPTEP 240
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 27.1 bits (57), Expect = 9.5
Identities = 19/62 (30%), Positives = 25/62 (40%)
Frame = -3
Query: 317 FGGADAGRSAGDQPRSVPRLDKPSRRGTTSKGLLKPGGASPAGGTVTGWRGIPNNSSRRA 138
FGGA GD S K GT+S G+ GG P +G+ ++S
Sbjct: 322 FGGATKNGFGGDSSSSFGSGSKAGFGGTSSSGI---GGQKPGATESSGFPTKETSTSGGT 378
Query: 137 FG 132
FG
Sbjct: 379 FG 380
>AF047653-2|AAC04459.1| 388|Caenorhabditis elegans Hypothetical
protein W02F12.3 protein.
Length = 388
Score = 27.1 bits (57), Expect = 9.5
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +1
Query: 199 DAPPGFNNPLEVVPRRLGLSNRGT-DRGWSPALRPASAPPNHNHTLTRDEPQD 354
+ P NNP E RR L ++ G +P+ RP++A N +H EPQ+
Sbjct: 250 EVPLAQNNP-EARGRREWLQHQNAVGSGDTPSTRPSTAENNSDHGEGPSEPQN 301
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 27.1 bits (57), Expect = 9.5
Identities = 19/62 (30%), Positives = 25/62 (40%)
Frame = -3
Query: 317 FGGADAGRSAGDQPRSVPRLDKPSRRGTTSKGLLKPGGASPAGGTVTGWRGIPNNSSRRA 138
FGGA GD S K GT+S G+ GG P +G+ ++S
Sbjct: 322 FGGATKNGFGGDSSSSFGSGSKAGFGGTSSSGI---GGQKPGATESSGFPTKETSTSGGT 378
Query: 137 FG 132
FG
Sbjct: 379 FG 380
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.130 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,959,570
Number of Sequences: 27780
Number of extensions: 350069
Number of successful extensions: 1414
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1406
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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