Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_G15
         (502 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC128390-1|AAI28391.1| 1682|Homo sapiens ADAMTSL3 protein protein.     31   1.7  
BC128389-1|AAI28390.1| 1691|Homo sapiens ADAMTS-like 3 protein.        31   1.7  
AF237652-1|AAK15041.1|  766|Homo sapiens a disintegrin-like and ...    30   3.9  
AJ509130-1|CAD48897.1|   75|Homo sapiens immunoglobulin heavy ch...    29   9.1  

>BC128390-1|AAI28391.1| 1682|Homo sapiens ADAMTSL3 protein protein.
          Length = 1682

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 19/52 (36%), Positives = 27/52 (51%)
 Frame = +3

Query: 174 AVPLMKRSDKFTVKGVGRELIKAVVINDLKGDGNSYISDGGIGHRNVTINLQ 329
           AVPL  RS + TVKG     I++  +   KG+ +S+ S G     N T+  Q
Sbjct: 249 AVPLGSRSVRITVKGPAHLFIESKTLQGSKGE-HSFNSPGVFVVENTTVEFQ 299


>BC128389-1|AAI28390.1| 1691|Homo sapiens ADAMTS-like 3 protein.
          Length = 1691

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 19/52 (36%), Positives = 27/52 (51%)
 Frame = +3

Query: 174 AVPLMKRSDKFTVKGVGRELIKAVVINDLKGDGNSYISDGGIGHRNVTINLQ 329
           AVPL  RS + TVKG     I++  +   KG+ +S+ S G     N T+  Q
Sbjct: 249 AVPLGSRSVRITVKGPAHLFIESKTLQGSKGE-HSFNSPGVFVVENTTVEFQ 299


>AF237652-1|AAK15041.1|  766|Homo sapiens a disintegrin-like and
           metalloprotease domain with thrombospondin type I motifs
           protein.
          Length = 766

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 19/52 (36%), Positives = 27/52 (51%)
 Frame = +3

Query: 174 AVPLMKRSDKFTVKGVGRELIKAVVINDLKGDGNSYISDGGIGHRNVTINLQ 329
           AVPL  RS + TVKG     I++  +   KG+ +S+ S G     N T+  Q
Sbjct: 249 AVPLGSRSVRITVKGPVHLFIESKTLQGSKGE-HSFNSPGVFVVENTTVEFQ 299


>AJ509130-1|CAD48897.1|   75|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 75

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = -3

Query: 257 IVYYNCLDQFAPNSLDGKFVTSLHKGYGVFLVYFVVDKMAANDVAYY 117
           I++Y+ + ++  NS+ G+F  S         VY  +D + A D A Y
Sbjct: 11  IIWYDGIKKYYANSVKGRFTISRDNSKNT--VYLQMDSLRAEDTAVY 55


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,757,139
Number of Sequences: 237096
Number of extensions: 1205381
Number of successful extensions: 5567
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5567
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)