Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_G04
(392 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 110 7e-26
SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces pombe... 96 1e-21
SPCC550.10 |meu8||betaine aldehyde dehydrogenase |Schizosaccharo... 88 4e-19
SPAC1002.12c |||succinate-semialdehyde dehydrogenase |Schizosacc... 85 4e-18
SPAC139.05 |||succinate-semialdehyde dehydrogenase |Schizosaccha... 77 1e-15
SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces pomb... 51 7e-08
SPCC4B3.15 |mid1|dmf1|medial ring protein Mid1|Schizosaccharomyc... 26 1.8
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 2.4
SPCC24B10.08c |||histone acetyltransferase complex subunit Ada2 ... 26 2.4
SPAC14C4.09 |agn1||glucan endo-1,3-alpha-glucosidase Agn1|Schizo... 25 3.2
SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1 |Sc... 25 3.2
SPAC1751.01c |gti1||gluconate transporter inducer Gti1|Schizosac... 25 5.5
SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit ... 25 5.5
SPBC428.11 |||homocysteine synthase |Schizosaccharomyces pombe|c... 25 5.5
SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1 |Schizosaccharom... 25 5.5
SPBC21B10.09 |||acetyl-CoA transporter |Schizosaccharomyces pomb... 24 7.3
SPBC23G7.08c |rga7||GTPase activating protein Rga7|Schizosacchar... 24 7.3
SPBC32F12.15 |tfb5||transcription factor TFIIH complex subunit T... 24 7.3
SPAC31G5.09c |spk1||MAP kinase Spk1|Schizosaccharomyces pombe|ch... 24 9.7
SPBC839.11c |hut1||uridine diphosphate-N-acetylglucosamine trans... 24 9.7
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 110 bits (265), Expect = 7e-26
Identities = 51/111 (45%), Positives = 74/111 (66%), Gaps = 1/111 (0%)
Frame = +1
Query: 61 VGKVIQRGAAGT-VKRITLELGGKSPLIVLGDVDLEKAVEAAHAALFYNMGQCCTDGSRT 237
VG+++ R AA + +K++TLELGGKSP IV D DL+ A + +FYN GQ C GSR
Sbjct: 251 VGRMVMRAAASSNLKKVTLELGGKSPNIVFNDADLDSAAVWTNYGIFYNSGQVCCAGSRV 310
Query: 238 FVEDKIYDKFVELSAARAKKRVVGDPFRPDVEQGPQIDSEPHAKILSLIES 390
+V++ +YD+F++ A+AK VGDPF D QG Q+ + + +I+S IES
Sbjct: 311 YVQEDVYDEFIKRMVAKAKTLKVGDPFAEDTFQGAQVSKQQYERIVSYIES 361
Score = 27.9 bits (59), Expect = 0.59
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +3
Query: 18 HPDVDKIAFTGST 56
H D+DK+AFTGST
Sbjct: 237 HMDIDKVAFTGST 249
>SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 96.3 bits (229), Expect = 1e-21
Identities = 46/110 (41%), Positives = 68/110 (61%), Gaps = 1/110 (0%)
Frame = +1
Query: 61 VGKVIQRGAAGTVKRITLELGGKSPLIVLGDVDLEKAVEAAHAALFYNMGQCCTDGSRTF 240
VG ++Q+ AA +K +TLE GGKSP +V D DL++AV+ A + YN GQ CT SR +
Sbjct: 245 VGVIVQQLAASNLKAVTLECGGKSPFLVFEDADLDQAVKWAALGIMYNSGQICTSNSRIY 304
Query: 241 VEDKIYDKFVELSAARA-KKRVVGDPFRPDVEQGPQIDSEPHAKILSLIE 387
V+D +YDKF+EL + +VG PF + GP ++ + +I + IE
Sbjct: 305 VQDSVYDKFIELFKKHVIQDYIVGMPFDDNTVVGPVVNKTQYNRIKNYIE 354
Score = 29.9 bits (64), Expect = 0.15
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 9 LVDHPDVDKIAFTGSTE 59
+ HP +DKIAFTGST+
Sbjct: 228 MAKHPGIDKIAFTGSTK 244
>SPCC550.10 |meu8||betaine aldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 500
Score = 88.2 bits (209), Expect = 4e-19
Identities = 43/111 (38%), Positives = 63/111 (56%)
Frame = +1
Query: 58 SVGKVIQRGAAGTVKRITLELGGKSPLIVLGDVDLEKAVEAAHAALFYNMGQCCTDGSRT 237
+ GK I AA + +TLELGGKSPLI+ D DL A+ +A A+F+N G+ CT SR
Sbjct: 252 ATGKKIMHAAAENIVPLTLELGGKSPLIICEDADLSLAIPSAAFAIFFNQGEACTAASRL 311
Query: 238 FVEDKIYDKFVELSAARAKKRVVGDPFRPDVEQGPQIDSEPHAKILSLIES 390
V + + D+ + + A K ++G+ P V GP + KI+S I+S
Sbjct: 312 IVHESVADEVLGGLVSEANKLIIGNGLDPQVTLGPVVSKTQFEKIVSYIQS 362
>SPAC1002.12c |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 85.0 bits (201), Expect = 4e-18
Identities = 41/110 (37%), Positives = 62/110 (56%)
Frame = +1
Query: 58 SVGKVIQRGAAGTVKRITLELGGKSPLIVLGDVDLEKAVEAAHAALFYNMGQCCTDGSRT 237
+VGK++ + ++ T+K+++LELGG +P IV D DLEKA +A A F GQ C +R
Sbjct: 250 NVGKILAKQSSSTLKKLSLELGGNAPFIVFEDADLEKAADALMACKFRGSGQTCVCANRI 309
Query: 238 FVEDKIYDKFVELSAARAKKRVVGDPFRPDVEQGPQIDSEPHAKILSLIE 387
+V +YD FV+L R K +G V GP I + +K+ +E
Sbjct: 310 YVHSSVYDAFVDLVTERVSKFKLGYGLDAGVTHGPLISEKAISKVKQHVE 359
>SPAC139.05 |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 493
Score = 77.0 bits (181), Expect = 1e-15
Identities = 38/110 (34%), Positives = 60/110 (54%)
Frame = +1
Query: 58 SVGKVIQRGAAGTVKRITLELGGKSPLIVLGDVDLEKAVEAAHAALFYNMGQCCTDGSRT 237
+VGK++ +A T+K++++ELGG +P IV D +++AVE+ F + GQ C +R
Sbjct: 245 NVGKILMGQSASTIKKVSMELGGNAPFIVFPDFPIDQAVESFCTIKFNSCGQVCVCPNRV 304
Query: 238 FVEDKIYDKFVELSAARAKKRVVGDPFRPDVEQGPQIDSEPHAKILSLIE 387
+V +YD+FV + K VGD F GP I + K+ IE
Sbjct: 305 YVHKNVYDEFVSKLTEKVKTIKVGDGFDSSSAVGPLISQDGCKKVSKHIE 354
>SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 50.8 bits (116), Expect = 7e-08
Identities = 30/109 (27%), Positives = 49/109 (44%)
Frame = +1
Query: 61 VGKVIQRGAAGTVKRITLELGGKSPLIVLGDVDLEKAVEAAHAALFYNMGQCCTDGSRTF 240
+ K++ AA + + LELGGK P I+ D LE+ + +F + GQ C R
Sbjct: 221 IAKLVAASAAKQLTPLCLELGGKDPCILTDDHRLEEILSIVMRGVFQSAGQNCIGIERII 280
Query: 241 VEDKIYDKFVELSAARAKKRVVGDPFRPDVEQGPQIDSEPHAKILSLIE 387
D +YD + R +G + DV+ G + + + SLI+
Sbjct: 281 ALDGVYDTIITKLYNRISTMRLGMYTQNDVDMGAMVSNNRFDHLESLIQ 329
>SPCC4B3.15 |mid1|dmf1|medial ring protein Mid1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 920
Score = 26.2 bits (55), Expect = 1.8
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -1
Query: 329 TSGLKGSPTTRFLARAADNST--NLSYILSSTKVREPSVQHCP 207
TS G + R +ST NLS ILSS +R PS+Q P
Sbjct: 415 TSASVGYSISSQRGRIKSSSTIDNLSAILSSEDLRHPSMQPVP 457
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.8 bits (54), Expect = 2.4
Identities = 21/78 (26%), Positives = 34/78 (43%)
Frame = -1
Query: 272 STNLSYILSSTKVREPSVQHCPML*KSAAWAASTAFSRSTSPRTMRGDLPPSSSVMRFTV 93
S+ S + SST +PSV S+A ST+ S +S + PSSS
Sbjct: 172 SSTFSSLSSSTSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLT 231
Query: 92 PAAPRCITLPTLR*TSES 39
++ ++P+ +S S
Sbjct: 232 SSSLSTSSIPSTSSSSSS 249
Score = 25.0 bits (52), Expect = 4.2
Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
Frame = -1
Query: 392 PDSIRLRIFACGSLSICGPCSTSGLKGS-PTTRFLARAADNSTNLSYILSSTKVREPSVQ 216
P S+ I S S+ S+S L S P T + +ST+ S S+
Sbjct: 141 PSSVSSAILP-SSTSVEVSISSSSLSSSDPLTSSTFSSLSSSTSSSQPSVSSTSSSTFSS 199
Query: 215 HCPML*KSAAWAASTAFSRSTSPRTMRGDLPPSSSVMRFTVPA 87
P S+ ++S+ S S+SP + SSS+ ++P+
Sbjct: 200 AAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPS 242
>SPCC24B10.08c |||histone acetyltransferase complex subunit Ada2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 437
Score = 25.8 bits (54), Expect = 2.4
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -1
Query: 386 SIRLRIFACGSLSICGPCSTSG 321
SI +R C +C PC TSG
Sbjct: 18 SIHIRCVECVDFDLCIPCFTSG 39
>SPAC14C4.09 |agn1||glucan endo-1,3-alpha-glucosidase
Agn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 424
Score = 25.4 bits (53), Expect = 3.2
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 197 STTWDSAVPTVLAPSLRIKYMISSWS 274
ST WDSAV LA + Y + SW+
Sbjct: 140 STGWDSAVKEPLASAGYPIYFVPSWT 165
>SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1573
Score = 25.4 bits (53), Expect = 3.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 4 RGLLIIQMLTKLLSLVQRSVG 66
RG+ IQM T LL++V S+G
Sbjct: 130 RGIRFIQMPTTLLAMVDSSIG 150
>SPAC1751.01c |gti1||gluconate transporter inducer
Gti1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 24.6 bits (51), Expect = 5.5
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = -1
Query: 170 AFSRSTSPRTMRGDLPPSSSVMRFTVPAAPRCITLPTLR*TSESNFVNIWMIN 12
A + ++ R + +PP S++ R +VP P +LP +R TS + F + +N
Sbjct: 636 AENHASGGRLPKVPIPPLSNMRRGSVPIIPSSASLP-MR-TSGNRFCHYSSLN 686
>SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit
Bgs4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1955
Score = 24.6 bits (51), Expect = 5.5
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 40 LSLVQRSVGKVIQRGAAGTVKRITLELGGKSPL 138
+S + +V ++I+RG KR ++G SPL
Sbjct: 1430 ISFIPLTVHELIERGVWRATKRFFKQIGSFSPL 1462
>SPBC428.11 |||homocysteine synthase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 429
Score = 24.6 bits (51), Expect = 5.5
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -1
Query: 380 RLRIFACGSLSICGPCSTSGLKGSPTTRFLARAADNSTNLSYILSST 240
R+ G+ +I TS L + TT LA+A DN + SY+ T
Sbjct: 71 RIAALEHGAAAIATSSGTSALFMALTT--LAKAGDNIVSTSYLYGGT 115
>SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 834
Score = 24.6 bits (51), Expect = 5.5
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -3
Query: 249 ILNEGARTVGTALSHVVEECRVGR 178
+LN G R L V EEC VGR
Sbjct: 356 LLNHGIRPFYQKLREVEEECFVGR 379
>SPBC21B10.09 |||acetyl-CoA transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 519
Score = 24.2 bits (50), Expect = 7.3
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 357 LAVDLWSLFYVRPEGIAYNS 298
+AVD WSL + PE ++Y S
Sbjct: 169 IAVDGWSLNMLNPEQLSYAS 188
>SPBC23G7.08c |rga7||GTPase activating protein
Rga7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 24.2 bits (50), Expect = 7.3
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -3
Query: 168 LLEVHVPEDYEGRLAA 121
LL++H PEDYE + A
Sbjct: 562 LLQLHTPEDYENDVHA 577
>SPBC32F12.15 |tfb5||transcription factor TFIIH complex subunit Tfb5
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 68
Score = 24.2 bits (50), Expect = 7.3
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +1
Query: 94 TVKRITLELGGKSPLIVLGDVDLEK 168
TVK++ L + +SP IV+ ++D E+
Sbjct: 16 TVKQLILNMDEQSPGIVIEEIDEER 40
>SPAC31G5.09c |spk1||MAP kinase Spk1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 372
Score = 23.8 bits (49), Expect = 9.7
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 259 DKFVELSAARAKKRVVGDPFRPDV 330
D F + +ARA+K + PF P V
Sbjct: 264 DDFSRIKSARARKYIKSLPFTPKV 287
>SPBC839.11c |hut1||uridine diphosphate-N-acetylglucosamine
transporter Hut1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 322
Score = 23.8 bits (49), Expect = 9.7
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -3
Query: 333 FYVRPEGIAYNSFLGACSGQLHELIIYFILNE-GARTVGT 217
F R I + L AC+G + +L I+F L + G+ T+ T
Sbjct: 227 FINRHPSILKDMLLFACTGSVGQLFIFFTLEKFGSITLVT 266
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,435,730
Number of Sequences: 5004
Number of extensions: 24891
Number of successful extensions: 93
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 93
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 130061696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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