Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_G04
(392 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF106575-1|AAC78174.2| 537|Caenorhabditis elegans Aldehyde dehy... 128 1e-30
U12966-2|AAN63391.1| 422|Caenorhabditis elegans Aldehyde dehydr... 116 5e-27
U12966-1|AAA20615.3| 510|Caenorhabditis elegans Aldehyde dehydr... 116 5e-27
Z81538-1|CAB04383.1| 569|Caenorhabditis elegans Hypothetical pr... 89 1e-18
Z68760-14|CAA92998.2| 908|Caenorhabditis elegans Hypothetical p... 88 2e-18
Z68748-13|CAA92957.2| 908|Caenorhabditis elegans Hypothetical p... 88 2e-18
AC006814-2|AAP46269.1| 430|Caenorhabditis elegans Aldehyde dehy... 81 2e-16
AC006814-1|AAP46268.1| 499|Caenorhabditis elegans Aldehyde dehy... 81 2e-16
U00051-9|AAM29693.1| 503|Caenorhabditis elegans Aldehyde dehydr... 81 4e-16
U00051-8|AAA91356.1| 687|Caenorhabditis elegans Aldehyde dehydr... 81 4e-16
U46673-3|AAC48151.1| 506|Caenorhabditis elegans Aldehyde dehydr... 63 8e-11
U13070-4|AAC46640.2| 531|Caenorhabditis elegans Aldehyde dehydr... 53 6e-08
Z49127-3|CAA88946.1| 523|Caenorhabditis elegans Hypothetical pr... 49 1e-06
AF039039-7|AAB94178.1| 437|Caenorhabditis elegans Aldehyde dehy... 47 4e-06
AF016452-9|AAO26003.1| 494|Caenorhabditis elegans Aldehyde dehy... 44 4e-05
AF016452-8|AAM45357.1| 493|Caenorhabditis elegans Aldehyde dehy... 44 4e-05
AF016452-7|AAB66022.2| 493|Caenorhabditis elegans Aldehyde dehy... 44 4e-05
Z92782-5|CAB07190.1| 385|Caenorhabditis elegans Hypothetical pr... 29 0.90
AF016440-5|AAB65904.2| 535|Caenorhabditis elegans Hypothetical ... 29 0.90
AF047651-5|AAC02722.2| 702|Caenorhabditis elegans Germline-enha... 29 1.2
Z69716-4|CAA93528.1| 480|Caenorhabditis elegans Hypothetical pr... 28 2.1
Z81115-6|CAD45598.1| 630|Caenorhabditis elegans Hypothetical pr... 28 2.7
AL032658-6|CAA21747.2| 630|Caenorhabditis elegans Hypothetical ... 28 2.7
AL021572-2|CAA16518.1| 415|Caenorhabditis elegans Hypothetical ... 28 2.7
AF016440-6|AAN84798.1| 525|Caenorhabditis elegans Hypothetical ... 27 3.6
AC006605-4|AAK85441.2| 1378|Caenorhabditis elegans Hypothetical ... 27 3.6
Z92806-2|CAB07257.1| 303|Caenorhabditis elegans Hypothetical pr... 27 6.3
U53153-9|AAC69041.1| 511|Caenorhabditis elegans Hypothetical pr... 27 6.3
AF016654-1|AAB66028.1| 731|Caenorhabditis elegans Hypothetical ... 27 6.3
AC084158-40|AAM15618.2| 354|Caenorhabditis elegans Hypothetical... 26 8.4
AC084158-39|AAM15616.2| 483|Caenorhabditis elegans Hypothetical... 26 8.4
AC084158-38|AAM15617.2| 488|Caenorhabditis elegans Hypothetical... 26 8.4
AC084158-37|AAM15615.2| 486|Caenorhabditis elegans Hypothetical... 26 8.4
>AF106575-1|AAC78174.2| 537|Caenorhabditis elegans Aldehyde
dehydrogenase protein 2 protein.
Length = 537
Score = 128 bits (310), Expect = 1e-30
Identities = 63/111 (56%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Frame = +1
Query: 61 VGKVIQRGAA-GTVKRITLELGGKSPLIVLGDVDLEKAVEAAHAALFYNMGQCCTDGSRT 237
VGK I + AA VK++TLELGGKSP IV D DLE+AV +H ALF+N GQCC+ GSRT
Sbjct: 286 VGKTIMKAAAESNVKKVTLELGGKSPNIVFADADLEEAVRQSHHALFFNQGQCCSAGSRT 345
Query: 238 FVEDKIYDKFVELSAARAKKRVVGDPFRPDVEQGPQIDSEPHAKILSLIES 390
FVE KIYD+FV + +K V+GDPF + QGPQID I+ IES
Sbjct: 346 FVEGKIYDEFVAKAKELVEKTVIGDPFDENTTQGPQIDESQVETIMKYIES 396
Score = 31.1 bits (67), Expect = 0.29
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +3
Query: 9 LVDHPDVDKIAFTGSTE 59
+ H DVDK+AFTGSTE
Sbjct: 269 IASHMDVDKVAFTGSTE 285
>U12966-2|AAN63391.1| 422|Caenorhabditis elegans Aldehyde
dehydrogenase protein1, isoform b protein.
Length = 422
Score = 116 bits (280), Expect = 5e-27
Identities = 57/109 (52%), Positives = 71/109 (65%), Gaps = 1/109 (0%)
Frame = +1
Query: 61 VGKVIQRGAA-GTVKRITLELGGKSPLIVLGDVDLEKAVEAAHAALFYNMGQCCTDGSRT 237
VG+++ + AA VK++TLELGGKSP I+ D DL +V A+ LF+N GQCC GSRT
Sbjct: 171 VGRLVMKAAAESNVKKVTLELGGKSPNIIFADADLNDSVHQANHGLFFNQGQCCCAGSRT 230
Query: 238 FVEDKIYDKFVELSAARAKKRVVGDPFRPDVEQGPQIDSEPHAKILSLI 384
FVE KIYD FV S A+K V+GDPF QGPQ+D + IL I
Sbjct: 231 FVEGKIYDDFVARSKELAEKAVIGDPFDLKTTQGPQVDGKQVETILKYI 279
Score = 30.3 bits (65), Expect = 0.51
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3
Query: 18 HPDVDKIAFTGSTE 59
H DVDK+AFTGSTE
Sbjct: 157 HMDVDKVAFTGSTE 170
>U12966-1|AAA20615.3| 510|Caenorhabditis elegans Aldehyde
dehydrogenase protein1, isoform a protein.
Length = 510
Score = 116 bits (280), Expect = 5e-27
Identities = 57/109 (52%), Positives = 71/109 (65%), Gaps = 1/109 (0%)
Frame = +1
Query: 61 VGKVIQRGAA-GTVKRITLELGGKSPLIVLGDVDLEKAVEAAHAALFYNMGQCCTDGSRT 237
VG+++ + AA VK++TLELGGKSP I+ D DL +V A+ LF+N GQCC GSRT
Sbjct: 259 VGRLVMKAAAESNVKKVTLELGGKSPNIIFADADLNDSVHQANHGLFFNQGQCCCAGSRT 318
Query: 238 FVEDKIYDKFVELSAARAKKRVVGDPFRPDVEQGPQIDSEPHAKILSLI 384
FVE KIYD FV S A+K V+GDPF QGPQ+D + IL I
Sbjct: 319 FVEGKIYDDFVARSKELAEKAVIGDPFDLKTTQGPQVDGKQVETILKYI 367
Score = 30.3 bits (65), Expect = 0.51
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3
Query: 18 HPDVDKIAFTGSTE 59
H DVDK+AFTGSTE
Sbjct: 245 HMDVDKVAFTGSTE 258
>Z81538-1|CAB04383.1| 569|Caenorhabditis elegans Hypothetical
protein F45H10.1 protein.
Length = 569
Score = 88.6 bits (210), Expect = 1e-18
Identities = 43/100 (43%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
Frame = +1
Query: 61 VGKVIQRGAAGTVKRITLELGGKSPLIVLGDVDLEKAVEAAHAALFYNMGQCCTDGSRTF 240
VGK++ +A TVKR+ LELGG +PLIV D DL+ AV A F GQ C +R +
Sbjct: 248 VGKLLLAQSASTVKRVCLELGGNAPLIVFDDADLDVAVNGTMATKFRCSGQTCVSANRIY 307
Query: 241 VEDKIYDKFV-ELSAARAKKRVVGDPFRPDVEQGPQIDSE 357
V +KI+D+++ +L+AA +K V+GD P QGP ++ +
Sbjct: 308 VHEKIHDQYISKLAAAMKEKLVLGDGLNPKTTQGPLVNQK 347
>Z68760-14|CAA92998.2| 908|Caenorhabditis elegans Hypothetical
protein F36H1.6 protein.
Length = 908
Score = 87.8 bits (208), Expect = 2e-18
Identities = 42/106 (39%), Positives = 61/106 (57%)
Frame = +1
Query: 70 VIQRGAAGTVKRITLELGGKSPLIVLGDVDLEKAVEAAHAALFYNMGQCCTDGSRTFVED 249
V++ A +K+++LELGGKSPLI+ D DLEKAV+ A A+F+N G+ C R F+
Sbjct: 664 VMESCAKSNIKKVSLELGGKSPLIIFADADLEKAVKQACGAVFFNKGENCIAAGRVFIAK 723
Query: 250 KIYDKFVELSAARAKKRVVGDPFRPDVEQGPQIDSEPHAKILSLIE 387
I+D FV+ AK+ +GDP GPQ K++ +E
Sbjct: 724 SIHDDFVKKLVEEAKQYQIGDPLDRSTAHGPQNHLAHLNKLVEYVE 769
Score = 32.3 bits (70), Expect = 0.13
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = +3
Query: 6 RLVDHPDVDKIAFTGSTE 59
RL HPDV KI FTGSTE
Sbjct: 642 RLTAHPDVRKIGFTGSTE 659
>Z68748-13|CAA92957.2| 908|Caenorhabditis elegans Hypothetical
protein F36H1.6 protein.
Length = 908
Score = 87.8 bits (208), Expect = 2e-18
Identities = 42/106 (39%), Positives = 61/106 (57%)
Frame = +1
Query: 70 VIQRGAAGTVKRITLELGGKSPLIVLGDVDLEKAVEAAHAALFYNMGQCCTDGSRTFVED 249
V++ A +K+++LELGGKSPLI+ D DLEKAV+ A A+F+N G+ C R F+
Sbjct: 664 VMESCAKSNIKKVSLELGGKSPLIIFADADLEKAVKQACGAVFFNKGENCIAAGRVFIAK 723
Query: 250 KIYDKFVELSAARAKKRVVGDPFRPDVEQGPQIDSEPHAKILSLIE 387
I+D FV+ AK+ +GDP GPQ K++ +E
Sbjct: 724 SIHDDFVKKLVEEAKQYQIGDPLDRSTAHGPQNHLAHLNKLVEYVE 769
Score = 32.3 bits (70), Expect = 0.13
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = +3
Query: 6 RLVDHPDVDKIAFTGSTE 59
RL HPDV KI FTGSTE
Sbjct: 642 RLTAHPDVRKIGFTGSTE 659
>AC006814-2|AAP46269.1| 430|Caenorhabditis elegans Aldehyde
dehydrogenase protein12, isoform b protein.
Length = 430
Score = 81.4 bits (192), Expect = 2e-16
Identities = 46/111 (41%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
Frame = +1
Query: 64 GKVIQRGAAG-TVKRITLELGGKSPLIVLGDVDLEKAVEAAHAALFYNMGQCCTDGSRTF 240
G+ +QR AA VK +TLELGGKS +I+ D D++ AV +A A F N GQ CT+ +R F
Sbjct: 241 GEAVQRQAATKNVKPVTLELGGKSEIIIFDDSDVKSAVASAMLANFLNQGQVCTNATRVF 300
Query: 241 VEDKIYDKFVELSAARAKKRV-VGDPFRPDVEQGPQIDSEPHAKILSLIES 390
V+ I F E A ++ VGDP D G I+ +IL +ES
Sbjct: 301 VQKGILASFTEAIVQEANDKLKVGDPLLEDTRVGANINEGHLQRILGYVES 351
>AC006814-1|AAP46268.1| 499|Caenorhabditis elegans Aldehyde
dehydrogenase protein12, isoform a protein.
Length = 499
Score = 81.4 bits (192), Expect = 2e-16
Identities = 46/111 (41%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
Frame = +1
Query: 64 GKVIQRGAAG-TVKRITLELGGKSPLIVLGDVDLEKAVEAAHAALFYNMGQCCTDGSRTF 240
G+ +QR AA VK +TLELGGKS +I+ D D++ AV +A A F N GQ CT+ +R F
Sbjct: 241 GEAVQRQAATKNVKPVTLELGGKSEIIIFDDSDVKSAVASAMLANFLNQGQVCTNATRVF 300
Query: 241 VEDKIYDKFVELSAARAKKRV-VGDPFRPDVEQGPQIDSEPHAKILSLIES 390
V+ I F E A ++ VGDP D G I+ +IL +ES
Sbjct: 301 VQKGILASFTEAIVQEANDKLKVGDPLLEDTRVGANINEGHLQRILGYVES 351
>U00051-9|AAM29693.1| 503|Caenorhabditis elegans Aldehyde
dehydrogenase protein11, isoform b protein.
Length = 503
Score = 80.6 bits (190), Expect = 4e-16
Identities = 40/110 (36%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Frame = +1
Query: 64 GKVIQRGAAG-TVKRITLELGGKSPLIVLGDVDLEKAVEAAHAALFYNMGQCCTDGSRTF 240
GK I + A +K +TLELGGKS LIV D D++ AV A A FY+ GQ C++ S+
Sbjct: 247 GKKIMKACADRNIKPVTLELGGKSALIVFDDADIDSAVSCAMMANFYSQGQVCSNASKVL 306
Query: 241 VEDKIYDKFVELSAARAKKRVVGDPFRPDVEQGPQIDSEPHAKILSLIES 390
V + +F + +K +GDP + D + G I +E K+ I +
Sbjct: 307 VHKSVLKEFTKKLVDHTQKMKIGDPLKEDTQVGSHISAEHRNKVEGYIST 356
>U00051-8|AAA91356.1| 687|Caenorhabditis elegans Aldehyde
dehydrogenase protein11, isoform a protein.
Length = 687
Score = 80.6 bits (190), Expect = 4e-16
Identities = 40/110 (36%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Frame = +1
Query: 64 GKVIQRGAAG-TVKRITLELGGKSPLIVLGDVDLEKAVEAAHAALFYNMGQCCTDGSRTF 240
GK I + A +K +TLELGGKS LIV D D++ AV A A FY+ GQ C++ S+
Sbjct: 431 GKKIMKACADRNIKPVTLELGGKSALIVFDDADIDSAVSCAMMANFYSQGQVCSNASKVL 490
Query: 241 VEDKIYDKFVELSAARAKKRVVGDPFRPDVEQGPQIDSEPHAKILSLIES 390
V + +F + +K +GDP + D + G I +E K+ I +
Sbjct: 491 VHKSVLKEFTKKLVDHTQKMKIGDPLKEDTQVGSHISAEHRNKVEGYIST 540
>U46673-3|AAC48151.1| 506|Caenorhabditis elegans Aldehyde
dehydrogenase protein 10 protein.
Length = 506
Score = 62.9 bits (146), Expect = 8e-11
Identities = 39/109 (35%), Positives = 55/109 (50%)
Frame = +1
Query: 61 VGKVIQRGAAGTVKRITLELGGKSPLIVLGDVDLEKAVEAAHAALFYNMGQCCTDGSRTF 240
+GK IQ A K+++LE+GGK+P IV + A ++ F N G+ C SR F
Sbjct: 255 IGKKIQEDGAKLNKKVSLEMGGKNPGIVYSNYRKSDIASIARSS-FLNQGEICLCTSRLF 313
Query: 241 VEDKIYDKFVELSAARAKKRVVGDPFRPDVEQGPQIDSEPHAKILSLIE 387
V+ I+ FV+ AKK VGDP V+ G + K+ S IE
Sbjct: 314 VQKPIFADFVKSYVEEAKKFTVGDP-TTQVQIGAMNSKVHYEKVKSYIE 361
Score = 29.5 bits (63), Expect = 0.90
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 6 RLVDHPDVDKIAFTGST 56
RLVDH DV I+FTGST
Sbjct: 237 RLVDHVDVPLISFTGST 253
>U13070-4|AAC46640.2| 531|Caenorhabditis elegans Aldehyde
dehydrogenase protein 9 protein.
Length = 531
Score = 53.2 bits (122), Expect = 6e-08
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Frame = +1
Query: 61 VGKVIQRGAAGTVKRITLELGGKSPLIVLGDVDLEKAVEAAHAALFYNMGQCCTDGSRTF 240
+GK++ + ++ LELGG + +IV D DL V A A GQ CT R
Sbjct: 268 IGKIVGQQVQARFGKLLLELGGNNAIIVNEDADLNMVVPATVFAAVGTAGQRCTTTRRLI 327
Query: 241 VEDKIYDKFVE-LSAARAK-KRVVGDPFRPDVEQGP 342
V DK+YD+ +E L A A+ + +G P + GP
Sbjct: 328 VHDKVYDQVLERLKKAYAQFESRIGCPLDSNTIIGP 363
>Z49127-3|CAA88946.1| 523|Caenorhabditis elegans Hypothetical
protein F13D12.4a protein.
Length = 523
Score = 48.8 bits (111), Expect = 1e-06
Identities = 32/111 (28%), Positives = 52/111 (46%)
Frame = +1
Query: 58 SVGKVIQRGAAGTVKRITLELGGKSPLIVLGDVDLEKAVEAAHAALFYNMGQCCTDGSRT 237
+ GK I A KR+ +G K+ +++ D + E+ + AA F GQ C +
Sbjct: 254 AAGKHIYERGAKNGKRVQSNMGAKNHGVIMADANKEQTLNQLTAAAFGAAGQRCMALTTA 313
Query: 238 FVEDKIYDKFVELSAARAKKRVVGDPFRPDVEQGPQIDSEPHAKILSLIES 390
+ + EL +AK V ++PD + GP I + A++L LIES
Sbjct: 314 VLVGEARAWLPEL-VEKAKNLKVNAGWKPDTDIGPLISKQSKARVLRLIES 363
>AF039039-7|AAB94178.1| 437|Caenorhabditis elegans Aldehyde
dehydrogenase protein 5 protein.
Length = 437
Score = 47.2 bits (107), Expect = 4e-06
Identities = 25/70 (35%), Positives = 34/70 (48%)
Frame = +1
Query: 61 VGKVIQRGAAGTVKRITLELGGKSPLIVLGDVDLEKAVEAAHAALFYNMGQCCTDGSRTF 240
V K+I AA + +TLELGGK P++V D D+E + + + N GQ C
Sbjct: 192 VAKIIMAAAAKHLTPVTLELGGKCPVVVEDDADIEISAQRIARGKWLNCGQTCLAPDYIL 251
Query: 241 VEDKIYDKFV 270
V KFV
Sbjct: 252 VSSATKPKFV 261
>AF016452-9|AAO26003.1| 494|Caenorhabditis elegans Aldehyde
dehydrogenase protein4, isoform c protein.
Length = 494
Score = 44.0 bits (99), Expect = 4e-05
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = +1
Query: 61 VGKVIQRGAAGTVKRITLELGGKSPLIVLGDVDLEKAVEAAHAALFYNMGQCCTDGSRTF 240
V K+I AA + +TLELGGK P++V D D++ + + + N GQ C
Sbjct: 191 VAKIIMTAAAKHLTPVTLELGGKCPVVVEDDADIDISAKRIAWGKWLNCGQTCLAPDYIL 250
Query: 241 VEDKIYDKFV 270
V + K V
Sbjct: 251 VNSTVKPKLV 260
>AF016452-8|AAM45357.1| 493|Caenorhabditis elegans Aldehyde
dehydrogenase protein4, isoform b protein.
Length = 493
Score = 44.0 bits (99), Expect = 4e-05
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = +1
Query: 61 VGKVIQRGAAGTVKRITLELGGKSPLIVLGDVDLEKAVEAAHAALFYNMGQCCTDGSRTF 240
V K+I AA + +TLELGGK P++V D D++ + + + N GQ C
Sbjct: 191 VAKIIMTAAAKHLTPVTLELGGKCPVVVEDDADIDISAKRIAWGKWLNCGQTCLAPDYIL 250
Query: 241 VEDKIYDKFV 270
V + K V
Sbjct: 251 VNSTVKPKLV 260
>AF016452-7|AAB66022.2| 493|Caenorhabditis elegans Aldehyde
dehydrogenase protein4, isoform a protein.
Length = 493
Score = 44.0 bits (99), Expect = 4e-05
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = +1
Query: 61 VGKVIQRGAAGTVKRITLELGGKSPLIVLGDVDLEKAVEAAHAALFYNMGQCCTDGSRTF 240
V K+I AA + +TLELGGK P++V D D++ + + + N GQ C
Sbjct: 191 VAKIIMTAAAKHLTPVTLELGGKCPVVVEDDADIDISAKRIAWGKWLNCGQTCLAPDYIL 250
Query: 241 VEDKIYDKFV 270
V + K V
Sbjct: 251 VNSTVKPKLV 260
>Z92782-5|CAB07190.1| 385|Caenorhabditis elegans Hypothetical
protein F14F8.6 protein.
Length = 385
Score = 29.5 bits (63), Expect = 0.90
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3
Query: 300 SFLGACSGQLHELIIYFILNEGARTV 223
SFL +G +H LIIYF+ +E +T+
Sbjct: 329 SFLSVINGTIHLLIIYFMCSEYRKTI 354
>AF016440-5|AAB65904.2| 535|Caenorhabditis elegans Hypothetical
protein F29G9.2a protein.
Length = 535
Score = 29.5 bits (63), Expect = 0.90
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = -1
Query: 287 RAADNSTNLSYILSSTKVREPSVQHCPML*KSAAWAASTAFSRSTSPRTMRGDLPPSSSV 108
R A+ S+ S+ +P ++H PM + + ++ S S+S + PP S V
Sbjct: 7 RRANMSSESGSSASTVHYAKPVLRHVPMPSSTTPSSIGSSSSSSSSYASSTKQTPPRSPV 66
Query: 107 MRF-TVPAAPRCITLPT 60
+R+ TV + I P+
Sbjct: 67 IRYPTVVVSKNSIATPS 83
>AF047651-5|AAC02722.2| 702|Caenorhabditis elegans
Germline-enhanced at-hook proteinprotein 1 protein.
Length = 702
Score = 29.1 bits (62), Expect = 1.2
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = -1
Query: 158 STSPRTMRGDLPPSSSVMRFTVPAAPRCITLPTLR 54
STS + ++ PP ++V+R++ PR + PTL+
Sbjct: 572 STSSQNLQDQPPPKNTVLRWSNITTPRILRPPTLK 606
>Z69716-4|CAA93528.1| 480|Caenorhabditis elegans Hypothetical
protein C04B4.4 protein.
Length = 480
Score = 28.3 bits (60), Expect = 2.1
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = -1
Query: 386 SIRLRIFACGSLSICGPCSTSGLK--GSPTTRFLARAADNSTNLSYILSSTKVRE 228
S+ ++F+ G L GP S L GSP RF+ +N T L S +K RE
Sbjct: 314 SLNSKVFSNG-LEQTGPDQKSQLSKNGSPKIRFMENTTNNVTRLESANSISKRRE 367
>Z81115-6|CAD45598.1| 630|Caenorhabditis elegans Hypothetical
protein Y76A2B.6 protein.
Length = 630
Score = 27.9 bits (59), Expect = 2.7
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 211 QCCTDGSRTFVEDKIYDKFVELSAARAKK 297
Q C G+R +V + IY KFVE ++ K
Sbjct: 154 QTCILGNRIWVPNMIYQKFVEAASTEGMK 182
>AL032658-6|CAA21747.2| 630|Caenorhabditis elegans Hypothetical
protein Y76A2B.6 protein.
Length = 630
Score = 27.9 bits (59), Expect = 2.7
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 211 QCCTDGSRTFVEDKIYDKFVELSAARAKK 297
Q C G+R +V + IY KFVE ++ K
Sbjct: 154 QTCILGNRIWVPNMIYQKFVEAASTEGMK 182
>AL021572-2|CAA16518.1| 415|Caenorhabditis elegans Hypothetical
protein W06H3.2 protein.
Length = 415
Score = 27.9 bits (59), Expect = 2.7
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = -2
Query: 268 RTYHIFYPQRRCENRRYS 215
RT + F+PQ++C++R YS
Sbjct: 136 RTTNFFHPQKQCDHRTYS 153
>AF016440-6|AAN84798.1| 525|Caenorhabditis elegans Hypothetical
protein F29G9.2b protein.
Length = 525
Score = 27.5 bits (58), Expect = 3.6
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -1
Query: 248 SSTKVREPSVQHCPML*KSAAWAASTAFSRSTSPRTMRGDLPPSSSVMRF-TVPAAPRCI 72
S+ +P ++H PM + + ++ S S+S + PP S V+R+ TV + I
Sbjct: 10 STVHYAKPVLRHVPMPSSTTPSSIGSSSSSSSSYASSTKQTPPRSPVIRYPTVVVSKNSI 69
Query: 71 TLPT 60
P+
Sbjct: 70 ATPS 73
>AC006605-4|AAK85441.2| 1378|Caenorhabditis elegans Hypothetical
protein C07H6.3 protein.
Length = 1378
Score = 27.5 bits (58), Expect = 3.6
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -1
Query: 176 STAFSRSTSPRTMRGDLPPSSSVMRFTVPAAP 81
+T R + RGDLPP ++ T PA P
Sbjct: 218 ATLLQRYQTTVATRGDLPPKHTITMETTPAQP 249
>Z92806-2|CAB07257.1| 303|Caenorhabditis elegans Hypothetical
protein K10G4.2 protein.
Length = 303
Score = 26.6 bits (56), Expect = 6.3
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -3
Query: 300 SFLGACSGQLHELIIYFILNE 238
SFL +G +H LI+YF+ +E
Sbjct: 248 SFLSVINGAIHFLIVYFMASE 268
>U53153-9|AAC69041.1| 511|Caenorhabditis elegans Hypothetical
protein T19A5.5 protein.
Length = 511
Score = 26.6 bits (56), Expect = 6.3
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -3
Query: 327 VRPEGIAYNSFLGACSGQLHELIIY 253
+RP+ I YN + +C+G+ + +IY
Sbjct: 194 MRPDNIQYNRDMFSCTGEFPKQVIY 218
>AF016654-1|AAB66028.1| 731|Caenorhabditis elegans Hypothetical
protein C17A2.5 protein.
Length = 731
Score = 26.6 bits (56), Expect = 6.3
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = -3
Query: 342 WSLFYVRPEGIAYNSFLGACSGQLHELIIYFILNEGARTVGTALSHVVEEC 190
+++FY PE +++NS L +I+Y + + + T VEEC
Sbjct: 198 YAIFYFIPENMSFNSVFARIWQFLIGMIVYILSSHSEKRAETV--EDVEEC 246
>AC084158-40|AAM15618.2| 354|Caenorhabditis elegans Hypothetical
protein Y69A2AR.1d protein.
Length = 354
Score = 26.2 bits (55), Expect = 8.4
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 262 KFVELSAARAKKRVVGDPFRPDVEQGPQIDSEPHAKILSLIE 387
KFV + A + + G R V GP I +P AK+ L++
Sbjct: 291 KFVGMMAEKRMAQTKGVAIRKFVVNGPGIHDKPCAKLQQLLK 332
>AC084158-39|AAM15616.2| 483|Caenorhabditis elegans Hypothetical
protein Y69A2AR.1b protein.
Length = 483
Score = 26.2 bits (55), Expect = 8.4
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 262 KFVELSAARAKKRVVGDPFRPDVEQGPQIDSEPHAKILSLIE 387
KFV + A + + G R V GP I +P AK+ L++
Sbjct: 291 KFVGMMAEKRMAQTKGVAIRKFVVNGPGIHDKPCAKLQQLLK 332
>AC084158-38|AAM15617.2| 488|Caenorhabditis elegans Hypothetical
protein Y69A2AR.1c protein.
Length = 488
Score = 26.2 bits (55), Expect = 8.4
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 262 KFVELSAARAKKRVVGDPFRPDVEQGPQIDSEPHAKILSLIE 387
KFV + A + + G R V GP I +P AK+ L++
Sbjct: 296 KFVGMMAEKRMAQTKGVAIRKFVVNGPGIHDKPCAKLQQLLK 337
>AC084158-37|AAM15615.2| 486|Caenorhabditis elegans Hypothetical
protein Y69A2AR.1a protein.
Length = 486
Score = 26.2 bits (55), Expect = 8.4
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 262 KFVELSAARAKKRVVGDPFRPDVEQGPQIDSEPHAKILSLIE 387
KFV + A + + G R V GP I +P AK+ L++
Sbjct: 294 KFVGMMAEKRMAQTKGVAIRKFVVNGPGIHDKPCAKLQQLLK 335
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,067,269
Number of Sequences: 27780
Number of extensions: 144058
Number of successful extensions: 582
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 577
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 598330768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -