Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_G03
         (349 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-466|AAO41497.1|  723|Drosophila melanogaster CG30492-PD...    29   2.1  
AE013599-465|AAF59221.3|  983|Drosophila melanogaster CG30492-PB...    29   2.1  
AE013599-464|AAF59220.5|  983|Drosophila melanogaster CG30492-PA...    29   2.1  
AE013599-463|AAO41496.1|  938|Drosophila melanogaster CG30492-PE...    29   2.1  
AE013599-462|AAO41495.1| 1020|Drosophila melanogaster CG30492-PC...    29   2.1  
AY122243-1|AAM52755.1| 1020|Drosophila melanogaster SD02228p pro...    28   2.8  
AY061574-1|AAL29122.1|  773|Drosophila melanogaster SD02660p pro...    28   2.8  
AY118561-1|AAM49930.1|  359|Drosophila melanogaster LD38742p pro...    27   8.6  
AE014298-2620|AAF48771.3|  359|Drosophila melanogaster CG6506-PA...    27   8.6  

>AE013599-466|AAO41497.1|  723|Drosophila melanogaster CG30492-PD,
           isoform D protein.
          Length = 723

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +3

Query: 54  AVDLITLVERSPISNLHQRNGLRPQHRHHH 143
           AV  I+L  RS +S+L   NGL+ +HR  H
Sbjct: 86  AVSEISLDTRSHVSDLANGNGLKRRHRTEH 115


>AE013599-465|AAF59221.3|  983|Drosophila melanogaster CG30492-PB,
           isoform B protein.
          Length = 983

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +3

Query: 54  AVDLITLVERSPISNLHQRNGLRPQHRHHH 143
           AV  I+L  RS +S+L   NGL+ +HR  H
Sbjct: 264 AVSEISLDTRSHVSDLANGNGLKRRHRTEH 293


>AE013599-464|AAF59220.5|  983|Drosophila melanogaster CG30492-PA,
           isoform A protein.
          Length = 983

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +3

Query: 54  AVDLITLVERSPISNLHQRNGLRPQHRHHH 143
           AV  I+L  RS +S+L   NGL+ +HR  H
Sbjct: 264 AVSEISLDTRSHVSDLANGNGLKRRHRTEH 293


>AE013599-463|AAO41496.1|  938|Drosophila melanogaster CG30492-PE,
           isoform E protein.
          Length = 938

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +3

Query: 54  AVDLITLVERSPISNLHQRNGLRPQHRHHH 143
           AV  I+L  RS +S+L   NGL+ +HR  H
Sbjct: 301 AVSEISLDTRSHVSDLANGNGLKRRHRTEH 330


>AE013599-462|AAO41495.1| 1020|Drosophila melanogaster CG30492-PC,
           isoform C protein.
          Length = 1020

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +3

Query: 54  AVDLITLVERSPISNLHQRNGLRPQHRHHH 143
           AV  I+L  RS +S+L   NGL+ +HR  H
Sbjct: 301 AVSEISLDTRSHVSDLANGNGLKRRHRTEH 330


>AY122243-1|AAM52755.1| 1020|Drosophila melanogaster SD02228p
           protein.
          Length = 1020

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +3

Query: 54  AVDLITLVERSPISNLHQRNGLRPQHRHHH 143
           AV  I+L  RS +S+L   NGL+  HR  H
Sbjct: 301 AVSEISLDTRSHVSDLANGNGLKRHHRTEH 330


>AY061574-1|AAL29122.1|  773|Drosophila melanogaster SD02660p
           protein.
          Length = 773

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +3

Query: 54  AVDLITLVERSPISNLHQRNGLRPQHRHHH 143
           AV  I+L  RS +S+L   NGL+  HR  H
Sbjct: 136 AVSEISLDTRSHVSDLANGNGLKRHHRTEH 165


>AY118561-1|AAM49930.1|  359|Drosophila melanogaster LD38742p
           protein.
          Length = 359

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +3

Query: 69  TLVERSPISNLHQRNGLRPQHRHHHIPTRDLLV 167
           T  ++  +  + QR   +PQ +HH +  R  LV
Sbjct: 26  TAAKKLKLDEIRQRGDPQPQEKHHKLELRSALV 58


>AE014298-2620|AAF48771.3|  359|Drosophila melanogaster CG6506-PA
           protein.
          Length = 359

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +3

Query: 69  TLVERSPISNLHQRNGLRPQHRHHHIPTRDLLV 167
           T  ++  +  + QR   +PQ +HH +  R  LV
Sbjct: 26  TAAKKLKLDEIRQRGDPQPQEKHHKLELRSALV 58


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,445,714
Number of Sequences: 53049
Number of extensions: 184680
Number of successful extensions: 563
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 559
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 817309116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)