Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_G03
         (349 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   1.4  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    22   2.4  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    22   2.4  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    22   2.4  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   2.4  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       20   7.3  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    20   9.6  
AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    20   9.6  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -3

Query: 56  RRSIASELLKPPRAEFLQ 3
           RRSI S LL+ PR+ F Q
Sbjct: 378 RRSIYSSLLRYPRSIFRQ 395


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
 Frame = +1

Query: 184 RLSI*STNNFIDLI--IAITFSKYFFNDYYYNIL 279
           RLS    + F D +   A T S YF    Y+N++
Sbjct: 86  RLSCDCDDKFYDCLKNSADTISSYFVGKMYFNLI 119


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
 Frame = +1

Query: 184 RLSI*STNNFIDLI--IAITFSKYFFNDYYYNIL 279
           RLS    + F D +   A T S YF    Y+N++
Sbjct: 91  RLSCDCDDKFYDCLKNSADTISSYFVGKMYFNLI 124


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
 Frame = +1

Query: 184 RLSI*STNNFIDLI--IAITFSKYFFNDYYYNIL 279
           RLS    + F D +   A T S YF    Y+N++
Sbjct: 91  RLSCDCDDKFYDCLKNSADTISSYFVGKMYFNLI 124


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 123 PQHRHHHIPTRDL 161
           P H HHH  T+ L
Sbjct: 349 PPHHHHHHQTQSL 361


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 84  SPISNLHQRNGLRPQH 131
           SP S +HQ   L  QH
Sbjct: 66  SPASGIHQMQQLLQQH 81


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 105 QRNGLRPQHRHHHIPTRDLLV 167
           +RN L  QH H H  T  +++
Sbjct: 185 RRNVLNKQHVHFHDYTGSVVI 205


>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -1

Query: 307 SIM*SVSISLKYYSNNR*KSTY 242
           S+  S + S  YY+NN  K  Y
Sbjct: 306 SLSNSCNYSNNYYNNNNYKKLY 327


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,909
Number of Sequences: 438
Number of extensions: 1425
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  7936320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)