Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_F20
         (507 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X65923-1|CAA46716.1|  133|Homo sapiens fau protein.                   107   2e-23
X65921-1|CAA46714.1|  133|Homo sapiens fau 1 protein.                 107   2e-23
CR541974-1|CAG46772.1|  133|Homo sapiens FAU protein.                 107   2e-23
BC033877-1|AAH33877.1|  133|Homo sapiens Finkel-Biskis-Reilly mu...   107   2e-23
AY398663-1|AAQ87877.1|  133|Homo sapiens Finkel-Biskis-Reilly mu...   107   2e-23
AK026639-1|BAB15515.1|  133|Homo sapiens protein ( Homo sapiens ...   107   2e-23
X75315-1|CAA53064.1|  230|Homo sapiens SEB4B protein.                  37   0.046
AY204751-1|AAP13576.1| 5058|Homo sapiens ABC A13 protein.              33   0.57 
AK126220-1|BAC86492.1|  122|Homo sapiens   protein.                    33   0.57 

>X65923-1|CAA46716.1|  133|Homo sapiens fau protein.
          Length = 133

 Score =  107 bits (257), Expect = 2e-23
 Identities = 53/123 (43%), Positives = 73/123 (59%), Gaps = 3/123 (2%)
 Frame = +2

Query: 62  HVLDVNGQESIGDIKNRLRLLADVESEEVTLSMCSAPLEDSCLVSEL---SSTELDLTVP 232
           H  +V GQE++  IK  +  L  +  E+  + +  APLED   + +    + T L++   
Sbjct: 11  HTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVEALTTLEVAGR 70

Query: 233 LLGGKVHGSLARAGKVKGQTPXXXXXXXXXXXXXXXXXXIQYNRRFVNVVQTFGRRRGPN 412
           +LGGKVHGSLARAGKV+GQTP                  +QYNRRFVNVV TFG+++GPN
Sbjct: 71  MLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPN 130

Query: 413 SNS 421
           +NS
Sbjct: 131 ANS 133


>X65921-1|CAA46714.1|  133|Homo sapiens fau 1 protein.
          Length = 133

 Score =  107 bits (257), Expect = 2e-23
 Identities = 53/123 (43%), Positives = 73/123 (59%), Gaps = 3/123 (2%)
 Frame = +2

Query: 62  HVLDVNGQESIGDIKNRLRLLADVESEEVTLSMCSAPLEDSCLVSEL---SSTELDLTVP 232
           H  +V GQE++  IK  +  L  +  E+  + +  APLED   + +    + T L++   
Sbjct: 11  HTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVEALTTLEVAGR 70

Query: 233 LLGGKVHGSLARAGKVKGQTPXXXXXXXXXXXXXXXXXXIQYNRRFVNVVQTFGRRRGPN 412
           +LGGKVHGSLARAGKV+GQTP                  +QYNRRFVNVV TFG+++GPN
Sbjct: 71  MLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPN 130

Query: 413 SNS 421
           +NS
Sbjct: 131 ANS 133


>CR541974-1|CAG46772.1|  133|Homo sapiens FAU protein.
          Length = 133

 Score =  107 bits (257), Expect = 2e-23
 Identities = 53/123 (43%), Positives = 73/123 (59%), Gaps = 3/123 (2%)
 Frame = +2

Query: 62  HVLDVNGQESIGDIKNRLRLLADVESEEVTLSMCSAPLEDSCLVSEL---SSTELDLTVP 232
           H  +V GQE++  IK  +  L  +  E+  + +  APLED   + +    + T L++   
Sbjct: 11  HTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVEALTTLEVAGR 70

Query: 233 LLGGKVHGSLARAGKVKGQTPXXXXXXXXXXXXXXXXXXIQYNRRFVNVVQTFGRRRGPN 412
           +LGGKVHGSLARAGKV+GQTP                  +QYNRRFVNVV TFG+++GPN
Sbjct: 71  MLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPN 130

Query: 413 SNS 421
           +NS
Sbjct: 131 ANS 133


>BC033877-1|AAH33877.1|  133|Homo sapiens Finkel-Biskis-Reilly
           murine sarcoma virus (FBR-MuSV) ubiquitously expressed
           protein.
          Length = 133

 Score =  107 bits (257), Expect = 2e-23
 Identities = 53/123 (43%), Positives = 73/123 (59%), Gaps = 3/123 (2%)
 Frame = +2

Query: 62  HVLDVNGQESIGDIKNRLRLLADVESEEVTLSMCSAPLEDSCLVSEL---SSTELDLTVP 232
           H  +V GQE++  IK  +  L  +  E+  + +  APLED   + +    + T L++   
Sbjct: 11  HTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVEALTTLEVAGR 70

Query: 233 LLGGKVHGSLARAGKVKGQTPXXXXXXXXXXXXXXXXXXIQYNRRFVNVVQTFGRRRGPN 412
           +LGGKVHGSLARAGKV+GQTP                  +QYNRRFVNVV TFG+++GPN
Sbjct: 71  MLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPN 130

Query: 413 SNS 421
           +NS
Sbjct: 131 ANS 133


>AY398663-1|AAQ87877.1|  133|Homo sapiens Finkel-Biskis-Reilly
           murine sarcoma virus (FBR-MuSV) ubiquitously expressed
           (fo protein.
          Length = 133

 Score =  107 bits (257), Expect = 2e-23
 Identities = 53/123 (43%), Positives = 73/123 (59%), Gaps = 3/123 (2%)
 Frame = +2

Query: 62  HVLDVNGQESIGDIKNRLRLLADVESEEVTLSMCSAPLEDSCLVSEL---SSTELDLTVP 232
           H  +V GQE++  IK  +  L  +  E+  + +  APLED   + +    + T L++   
Sbjct: 11  HTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVEALTTLEVAGR 70

Query: 233 LLGGKVHGSLARAGKVKGQTPXXXXXXXXXXXXXXXXXXIQYNRRFVNVVQTFGRRRGPN 412
           +LGGKVHGSLARAGKV+GQTP                  +QYNRRFVNVV TFG+++GPN
Sbjct: 71  MLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPN 130

Query: 413 SNS 421
           +NS
Sbjct: 131 ANS 133


>AK026639-1|BAB15515.1|  133|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22986 fis, clone KAT11742. ).
          Length = 133

 Score =  107 bits (257), Expect = 2e-23
 Identities = 53/123 (43%), Positives = 73/123 (59%), Gaps = 3/123 (2%)
 Frame = +2

Query: 62  HVLDVNGQESIGDIKNRLRLLADVESEEVTLSMCSAPLEDSCLVSEL---SSTELDLTVP 232
           H  +V GQE++  IK  +  L  +  E+  + +  APLED   + +    + T L++   
Sbjct: 11  HTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVEALTTLEVAGR 70

Query: 233 LLGGKVHGSLARAGKVKGQTPXXXXXXXXXXXXXXXXXXIQYNRRFVNVVQTFGRRRGPN 412
           +LGGKVHGSLARAGKV+GQTP                  +QYNRRFVNVV TFG+++GPN
Sbjct: 71  MLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPN 130

Query: 413 SNS 421
           +NS
Sbjct: 131 ANS 133


>X75315-1|CAA53064.1|  230|Homo sapiens SEB4B protein.
          Length = 230

 Score = 36.7 bits (81), Expect = 0.046
 Identities = 14/19 (73%), Positives = 18/19 (94%)
 Frame = +2

Query: 350 IQYNRRFVNVVQTFGRRRG 406
           +QYNRRFVNVV TFG+++G
Sbjct: 3   MQYNRRFVNVVPTFGKKKG 21


>AY204751-1|AAP13576.1| 5058|Homo sapiens ABC A13 protein.
          Length = 5058

 Score = 33.1 bits (72), Expect = 0.57
 Identities = 21/45 (46%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = -1

Query: 354 WILRLARPVLF---FFFCC--FSTLGVWPLTLPARARDPCTLPPR 235
           W+ RL  PVLF   FF+ C  F  L V     P R RD C L PR
Sbjct: 16  WLCRLRNPVLFLAEFFWPCILFVILTVLRFQEPPRYRDICYLQPR 60


>AK126220-1|BAC86492.1|  122|Homo sapiens   protein.
          Length = 122

 Score = 33.1 bits (72), Expect = 0.57
 Identities = 21/45 (46%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = -1

Query: 354 WILRLARPVLF---FFFCC--FSTLGVWPLTLPARARDPCTLPPR 235
           W+ RL  PVLF   FF+ C  F  L V     P R RD C L PR
Sbjct: 16  WLCRLRNPVLFLAEFFWPCILFVILTVLRFQEPPRYRDICYLQPR 60


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,845,236
Number of Sequences: 237096
Number of extensions: 1347023
Number of successful extensions: 7952
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7946
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)