Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_F19
(454 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC006479-1|AAH06479.1| 176|Homo sapiens chromosome 19 open read... 99 6e-21
BC001080-1|AAH01080.1| 176|Homo sapiens chromosome 19 open read... 99 6e-21
AC005253-1|AAC25583.1| 183|Homo sapiens R26445_1 protein. 99 6e-21
Z49769-1|CAA89839.1| 959|Homo sapiens cL27F12.1 (exons 42-61) p... 32 0.80
L12392-1|AAB38240.1| 3144|Homo sapiens Huntington's Disease prot... 32 0.80
AB016794-1|BAA36753.1| 3144|Homo sapiens huntingtin protein. 32 0.80
D87931-1|BAA75636.1| 1388|Homo sapiens Rho kinase protein. 29 7.4
BC030598-1|AAH30598.1| 597|Homo sapiens centrosomal protein 70k... 29 7.4
BC016050-1|AAH16050.1| 212|Homo sapiens CEP70 protein protein. 29 7.4
AL591502-3|CAI12581.1| 941|Homo sapiens gamma-aminobutyric acid... 29 7.4
AL445495-1|CAD13322.2| 941|Homo sapiens gamma-aminobutyric acid... 29 7.4
AL356282-1|CAH72233.1| 941|Homo sapiens gamma-aminobutyric acid... 29 7.4
AL353782-5|CAH71298.1| 941|Homo sapiens gamma-aminobutyric acid... 29 7.4
AJ012188-1|CAA09942.1| 941|Homo sapiens GABAB receptor, subunit... 29 7.4
AF289495-1|AAG35791.1| 554|Homo sapiens p10-binding protein BIT... 29 7.4
AF202146-1|AAG35616.1| 597|Homo sapiens p10-binding protein BIT... 29 7.4
AF099033-1|AAD45867.1| 941|Homo sapiens gamma-aminobutyric acid... 29 7.4
AF095784-1|AAD30389.1| 941|Homo sapiens GABA-B receptor R2 prot... 29 7.4
AF074483-1|AAD03336.1| 941|Homo sapiens GABA-B receptor 2 protein. 29 7.4
AF069755-1|AAC99345.1| 941|Homo sapiens orphan G protein-couple... 29 7.4
AF056085-1|AAC63228.1| 941|Homo sapiens GABA-B receptor protein. 29 7.4
AC018463-2|AAX93049.1| 1337|Homo sapiens unknown protein. 29 7.4
AB014519-1|BAA31594.2| 1428|Homo sapiens KIAA0619 protein protein. 29 7.4
>BC006479-1|AAH06479.1| 176|Homo sapiens chromosome 19 open reading
frame 50 protein.
Length = 176
Score = 99.1 bits (236), Expect = 6e-21
Identities = 51/101 (50%), Positives = 68/101 (67%)
Frame = +1
Query: 130 SAPEVFVQGLAGMVDQTDVEVIIRAQKNMLQRFEKTTEMLTNCNHLSASRLRAASIEFKK 309
SA VF + MV+ DV II AQKNML RFEKT EML N N+LS++RL+ S F
Sbjct: 6 SASRVFCGRILSMVNTDDVNAIILAQKNMLDRFEKTNEMLLNFNNLSSARLQQMSERFLH 65
Query: 310 HTQLLLDMKKDLEFISKKIRAIKTKLSTQYPEAYKLTVAAS 432
HT+ L++MK+DL+ I ++IR +K KL+ Q+PEA+ AS
Sbjct: 66 HTRTLVEMKRDLDSIFRRIRTLKGKLARQHPEAFSHIPEAS 106
>BC001080-1|AAH01080.1| 176|Homo sapiens chromosome 19 open reading
frame 50 protein.
Length = 176
Score = 99.1 bits (236), Expect = 6e-21
Identities = 51/101 (50%), Positives = 68/101 (67%)
Frame = +1
Query: 130 SAPEVFVQGLAGMVDQTDVEVIIRAQKNMLQRFEKTTEMLTNCNHLSASRLRAASIEFKK 309
SA VF + MV+ DV II AQKNML RFEKT EML N N+LS++RL+ S F
Sbjct: 6 SASRVFCGRILSMVNTDDVNAIILAQKNMLDRFEKTNEMLLNFNNLSSARLQQMSERFLH 65
Query: 310 HTQLLLDMKKDLEFISKKIRAIKTKLSTQYPEAYKLTVAAS 432
HT+ L++MK+DL+ I ++IR +K KL+ Q+PEA+ AS
Sbjct: 66 HTRTLVEMKRDLDSIFRRIRTLKGKLARQHPEAFSHIPEAS 106
>AC005253-1|AAC25583.1| 183|Homo sapiens R26445_1 protein.
Length = 183
Score = 99.1 bits (236), Expect = 6e-21
Identities = 51/101 (50%), Positives = 68/101 (67%)
Frame = +1
Query: 130 SAPEVFVQGLAGMVDQTDVEVIIRAQKNMLQRFEKTTEMLTNCNHLSASRLRAASIEFKK 309
SA VF + MV+ DV II AQKNML RFEKT EML N N+LS++RL+ S F
Sbjct: 13 SASRVFCGRILSMVNTDDVNAIILAQKNMLDRFEKTNEMLLNFNNLSSARLQQMSERFLH 72
Query: 310 HTQLLLDMKKDLEFISKKIRAIKTKLSTQYPEAYKLTVAAS 432
HT+ L++MK+DL+ I ++IR +K KL+ Q+PEA+ AS
Sbjct: 73 HTRTLVEMKRDLDSIFRRIRTLKGKLARQHPEAFSHIPEAS 113
>Z49769-1|CAA89839.1| 959|Homo sapiens cL27F12.1 (exons 42-61)
protein.
Length = 959
Score = 32.3 bits (70), Expect = 0.80
Identities = 16/69 (23%), Positives = 34/69 (49%)
Frame = +1
Query: 16 LVDNKFVLLVILFHCLKLISMANETPESDFSIECFQNYSAPEVFVQGLAGMVDQTDVEVI 195
L D++ + +I+ H LIS+++E P DF +N +A +F+Q + + +
Sbjct: 51 LHDSEHLTWLIVNHIQDLISLSHEPPVQDFISAVHRNSAASGLFIQAIQSRCENLSTPTM 110
Query: 196 IRAQKNMLQ 222
++ L+
Sbjct: 111 LKKTLQCLE 119
>L12392-1|AAB38240.1| 3144|Homo sapiens Huntington's Disease protein
protein.
Length = 3144
Score = 32.3 bits (70), Expect = 0.80
Identities = 16/69 (23%), Positives = 34/69 (49%)
Frame = +1
Query: 16 LVDNKFVLLVILFHCLKLISMANETPESDFSIECFQNYSAPEVFVQGLAGMVDQTDVEVI 195
L D++ + +I+ H LIS+++E P DF +N +A +F+Q + + +
Sbjct: 1912 LHDSEHLTWLIVNHIQDLISLSHEPPVQDFISAVHRNSAASGLFIQAIQSRCENLSTPTM 1971
Query: 196 IRAQKNMLQ 222
++ L+
Sbjct: 1972 LKKTLQCLE 1980
>AB016794-1|BAA36753.1| 3144|Homo sapiens huntingtin protein.
Length = 3144
Score = 32.3 bits (70), Expect = 0.80
Identities = 16/69 (23%), Positives = 34/69 (49%)
Frame = +1
Query: 16 LVDNKFVLLVILFHCLKLISMANETPESDFSIECFQNYSAPEVFVQGLAGMVDQTDVEVI 195
L D++ + +I+ H LIS+++E P DF +N +A +F+Q + + +
Sbjct: 1912 LHDSEHLTWLIVNHIQDLISLSHEPPVQDFISAVHRNSAASGLFIQAIQSRCENLSTPTM 1971
Query: 196 IRAQKNMLQ 222
++ L+
Sbjct: 1972 LKKTLQCLE 1980
>D87931-1|BAA75636.1| 1388|Homo sapiens Rho kinase protein.
Length = 1388
Score = 29.1 bits (62), Expect = 7.4
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = +1
Query: 211 NMLQRFEKTTEMLTNCNHLSASRLRAASIEFKKHTQLLLDMKKDLEFISKKIRAIKTKLS 390
N LQR T L +A+RLR E K Q L +DL+ + + K KL
Sbjct: 558 NQLQRQLDETNALLRTESDTAARLRKTQAESSKQIQQLESNNRDLQDKNCLLETAKLKLE 617
Query: 391 TQY 399
++
Sbjct: 618 KEF 620
>BC030598-1|AAH30598.1| 597|Homo sapiens centrosomal protein 70kDa
protein.
Length = 597
Score = 29.1 bits (62), Expect = 7.4
Identities = 30/109 (27%), Positives = 52/109 (47%)
Frame = +1
Query: 40 LVILFHCLKLISMANETPESDFSIECFQNYSAPEVFVQGLAGMVDQTDVEVIIRAQKNML 219
++++ H LK +S+ T D I F S+ + Q L +V++T Q+NM+
Sbjct: 34 VLLMMHGLKPLSLVKRTDLKDLII--FDKQSSQRMR-QNLKLLVEETS------CQQNMI 84
Query: 220 QRFEKTTEMLTNCNHLSASRLRAASIEFKKHTQLLLDMKKDLEFISKKI 366
Q +T + L N L + RAA+ E Q D+++ +E + KI
Sbjct: 85 QELIETNQQLR--NELQLEQSRAANQE-----QRANDLEQIMESVKSKI 126
>BC016050-1|AAH16050.1| 212|Homo sapiens CEP70 protein protein.
Length = 212
Score = 29.1 bits (62), Expect = 7.4
Identities = 30/109 (27%), Positives = 52/109 (47%)
Frame = +1
Query: 40 LVILFHCLKLISMANETPESDFSIECFQNYSAPEVFVQGLAGMVDQTDVEVIIRAQKNML 219
++++ H LK +S+ T D I F S+ + Q L +V++T Q+NM+
Sbjct: 34 VLLMMHGLKPLSLVKRTDLKDLII--FDKQSSQRMR-QNLKLLVEETS------CQQNMI 84
Query: 220 QRFEKTTEMLTNCNHLSASRLRAASIEFKKHTQLLLDMKKDLEFISKKI 366
Q +T + L N L + RAA+ E Q D+++ +E + KI
Sbjct: 85 QELIETNQQLR--NELQLEQSRAANQE-----QRANDLEQIMESVKSKI 126
>AL591502-3|CAI12581.1| 941|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 2 protein.
Length = 941
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +1
Query: 208 KNMLQRFEKTTEMLTNCNHLSASRLRAASIEFKKHTQLLLDMKKDLEFISKKIR 369
+N + KT+ +T+ N S SRL E + + ++ KDLE ++ +++
Sbjct: 764 QNQKKEDSKTSTSVTSVNQASTSRLEGLQSENHRLRMKITELDKDLEEVTMQLQ 817
>AL445495-1|CAD13322.2| 941|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 2 protein.
Length = 941
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +1
Query: 208 KNMLQRFEKTTEMLTNCNHLSASRLRAASIEFKKHTQLLLDMKKDLEFISKKIR 369
+N + KT+ +T+ N S SRL E + + ++ KDLE ++ +++
Sbjct: 764 QNQKKEDSKTSTSVTSVNQASTSRLEGLQSENHRLRMKITELDKDLEEVTMQLQ 817
>AL356282-1|CAH72233.1| 941|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 2 protein.
Length = 941
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +1
Query: 208 KNMLQRFEKTTEMLTNCNHLSASRLRAASIEFKKHTQLLLDMKKDLEFISKKIR 369
+N + KT+ +T+ N S SRL E + + ++ KDLE ++ +++
Sbjct: 764 QNQKKEDSKTSTSVTSVNQASTSRLEGLQSENHRLRMKITELDKDLEEVTMQLQ 817
>AL353782-5|CAH71298.1| 941|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 2 protein.
Length = 941
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +1
Query: 208 KNMLQRFEKTTEMLTNCNHLSASRLRAASIEFKKHTQLLLDMKKDLEFISKKIR 369
+N + KT+ +T+ N S SRL E + + ++ KDLE ++ +++
Sbjct: 764 QNQKKEDSKTSTSVTSVNQASTSRLEGLQSENHRLRMKITELDKDLEEVTMQLQ 817
>AJ012188-1|CAA09942.1| 941|Homo sapiens GABAB receptor, subunit 2
protein.
Length = 941
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +1
Query: 208 KNMLQRFEKTTEMLTNCNHLSASRLRAASIEFKKHTQLLLDMKKDLEFISKKIR 369
+N + KT+ +T+ N S SRL E + + ++ KDLE ++ +++
Sbjct: 764 QNQKKEDSKTSTSVTSVNQASTSRLEGLQSENHRLRMKITELDKDLEEVTMQLQ 817
>AF289495-1|AAG35791.1| 554|Homo sapiens p10-binding protein BITE
splice variant protein.
Length = 554
Score = 29.1 bits (62), Expect = 7.4
Identities = 30/109 (27%), Positives = 52/109 (47%)
Frame = +1
Query: 40 LVILFHCLKLISMANETPESDFSIECFQNYSAPEVFVQGLAGMVDQTDVEVIIRAQKNML 219
++++ H LK +S+ T D I F S+ + Q L +V++T Q+NM+
Sbjct: 34 VLLMMHGLKPLSLVKRTDLKDLII--FDKQSSQRMR-QNLKLLVEETS------CQQNMI 84
Query: 220 QRFEKTTEMLTNCNHLSASRLRAASIEFKKHTQLLLDMKKDLEFISKKI 366
Q +T + L N L + RAA+ E Q D+++ +E + KI
Sbjct: 85 QELIETNQQLR--NELQLEQSRAANQE-----QRANDLEQIMESVKSKI 126
>AF202146-1|AAG35616.1| 597|Homo sapiens p10-binding protein BITE
protein.
Length = 597
Score = 29.1 bits (62), Expect = 7.4
Identities = 30/109 (27%), Positives = 52/109 (47%)
Frame = +1
Query: 40 LVILFHCLKLISMANETPESDFSIECFQNYSAPEVFVQGLAGMVDQTDVEVIIRAQKNML 219
++++ H LK +S+ T D I F S+ + Q L +V++T Q+NM+
Sbjct: 34 VLLMMHGLKPLSLVKRTDLKDLII--FDKQSSQRMR-QNLKLLVEETS------CQQNMI 84
Query: 220 QRFEKTTEMLTNCNHLSASRLRAASIEFKKHTQLLLDMKKDLEFISKKI 366
Q +T + L N L + RAA+ E Q D+++ +E + KI
Sbjct: 85 QELIETNQQLR--NELQLEQSRAANQE-----QRANDLEQIMESVKSKI 126
>AF099033-1|AAD45867.1| 941|Homo sapiens gamma-aminobutyric acid
type B receptor 2 protein.
Length = 941
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +1
Query: 208 KNMLQRFEKTTEMLTNCNHLSASRLRAASIEFKKHTQLLLDMKKDLEFISKKIR 369
+N + KT+ +T+ N S SRL E + + ++ KDLE ++ +++
Sbjct: 764 QNQKKEDSKTSTSVTSVNQASTSRLEGLQSENHRLRMKITELDKDLEEVTMQLQ 817
>AF095784-1|AAD30389.1| 941|Homo sapiens GABA-B receptor R2
protein.
Length = 941
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +1
Query: 208 KNMLQRFEKTTEMLTNCNHLSASRLRAASIEFKKHTQLLLDMKKDLEFISKKIR 369
+N + KT+ +T+ N S SRL E + + ++ KDLE ++ +++
Sbjct: 764 QNQKKEDSKTSTSVTSVNQASTSRLEGLQSENHRLRMKITELDKDLEEVTMQLQ 817
>AF074483-1|AAD03336.1| 941|Homo sapiens GABA-B receptor 2 protein.
Length = 941
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +1
Query: 208 KNMLQRFEKTTEMLTNCNHLSASRLRAASIEFKKHTQLLLDMKKDLEFISKKIR 369
+N + KT+ +T+ N S SRL E + + ++ KDLE ++ +++
Sbjct: 764 QNQKKEDSKTSTSVTSVNQASTSRLEGLQSENHRLRMKITELDKDLEEVTMQLQ 817
>AF069755-1|AAC99345.1| 941|Homo sapiens orphan G protein-coupled
receptor HG20 protein.
Length = 941
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +1
Query: 208 KNMLQRFEKTTEMLTNCNHLSASRLRAASIEFKKHTQLLLDMKKDLEFISKKIR 369
+N + KT+ +T+ N S SRL E + + ++ KDLE ++ +++
Sbjct: 764 QNQKKEDSKTSTSVTSVNQASTSRLEGLQSENHRLRMKITELDKDLEEVTMQLQ 817
>AF056085-1|AAC63228.1| 941|Homo sapiens GABA-B receptor protein.
Length = 941
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +1
Query: 208 KNMLQRFEKTTEMLTNCNHLSASRLRAASIEFKKHTQLLLDMKKDLEFISKKIR 369
+N + KT+ +T+ N S SRL E + + ++ KDLE ++ +++
Sbjct: 764 QNQKKEDSKTSTSVTSVNQASTSRLEGLQSENHRLRMKITELDKDLEEVTMQLQ 817
>AC018463-2|AAX93049.1| 1337|Homo sapiens unknown protein.
Length = 1337
Score = 29.1 bits (62), Expect = 7.4
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = +1
Query: 211 NMLQRFEKTTEMLTNCNHLSASRLRAASIEFKKHTQLLLDMKKDLEFISKKIRAIKTKLS 390
N LQR T L +A+RLR E K Q L +DL+ + + K KL
Sbjct: 507 NQLQRQLDETNALLRTESDTAARLRKTQAESSKQIQQLESNNRDLQDKNCLLETAKLKLE 566
Query: 391 TQY 399
++
Sbjct: 567 KEF 569
>AB014519-1|BAA31594.2| 1428|Homo sapiens KIAA0619 protein protein.
Length = 1428
Score = 29.1 bits (62), Expect = 7.4
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = +1
Query: 211 NMLQRFEKTTEMLTNCNHLSASRLRAASIEFKKHTQLLLDMKKDLEFISKKIRAIKTKLS 390
N LQR T L +A+RLR E K Q L +DL+ + + K KL
Sbjct: 598 NQLQRQLDETNALLRTESDTAARLRKTQAESSKQIQQLESNNRDLQDKNCLLETAKLKLE 657
Query: 391 TQY 399
++
Sbjct: 658 KEF 660
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,347,847
Number of Sequences: 237096
Number of extensions: 870859
Number of successful extensions: 2153
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2153
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3758237868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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