Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_F18
(557 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a pr... 256 3e-68
BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a ... 256 3e-68
BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a ... 256 3e-68
BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a ... 256 3e-68
AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a ... 256 3e-68
AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a ... 256 3e-68
AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein L18a-... 201 1e-51
X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA ... 171 1e-42
AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a ... 95 2e-19
U83115-1|AAB53791.1| 1637|Homo sapiens non-lens beta gamma-cryst... 31 3.6
AL390074-1|CAH72091.1| 1723|Homo sapiens absent in melanoma 1 pr... 31 3.6
AL359292-2|CAI21046.1| 1723|Homo sapiens absent in melanoma 1 pr... 31 3.6
U20938-1|AAB51366.1| 1025|Homo sapiens dihydropyrimidine dehydro... 29 8.4
U09178-1|AAA57474.1| 1025|Homo sapiens dihydropyrimidine dehydro... 29 8.4
BX908805-1|CAI15125.1| 1025|Homo sapiens dihydropyrimidine dehyd... 29 8.4
BC131778-1|AAI31779.1| 1025|Homo sapiens dihydropyrimidine dehyd... 29 8.4
BC131777-1|AAI31778.1| 1025|Homo sapiens dihydropyrimidine dehyd... 29 8.4
AL356457-3|CAH70570.1| 1025|Homo sapiens dihydropyrimidine dehyd... 29 8.4
AB003063-1|BAA89789.1| 1025|Homo sapiens dihydropyrimidine dehyd... 29 8.4
>L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 256 bits (628), Expect = 3e-68
Identities = 117/174 (67%), Positives = 141/174 (81%)
Frame = +1
Query: 10 AKGELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIV 189
A G L+EY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV
Sbjct: 3 ASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIV 62
Query: 190 SIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAH 369
++ EKSP+++KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAH
Sbjct: 63 YCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAH 122
Query: 370 SIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 531
SIQI+KVE I A+ CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 123 SIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 256 bits (628), Expect = 3e-68
Identities = 117/174 (67%), Positives = 141/174 (81%)
Frame = +1
Query: 10 AKGELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIV 189
A G L+EY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV
Sbjct: 3 ASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIV 62
Query: 190 SIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAH 369
++ EKSP+++KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAH
Sbjct: 63 YCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAH 122
Query: 370 SIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 531
SIQI+KVE I A+ CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 123 SIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 256 bits (628), Expect = 3e-68
Identities = 117/174 (67%), Positives = 141/174 (81%)
Frame = +1
Query: 10 AKGELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIV 189
A G L+EY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV
Sbjct: 3 ASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIV 62
Query: 190 SIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAH 369
++ EKSP+++KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAH
Sbjct: 63 YCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAH 122
Query: 370 SIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 531
SIQI+KVE I A+ CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 123 SIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 256 bits (628), Expect = 3e-68
Identities = 117/174 (67%), Positives = 141/174 (81%)
Frame = +1
Query: 10 AKGELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIV 189
A G L+EY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV
Sbjct: 3 ASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIV 62
Query: 190 SIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAH 369
++ EKSP+++KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAH
Sbjct: 63 YCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAH 122
Query: 370 SIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 531
SIQI+KVE I A+ CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 123 SIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a
variant protein.
Length = 176
Score = 256 bits (628), Expect = 3e-68
Identities = 117/174 (67%), Positives = 141/174 (81%)
Frame = +1
Query: 10 AKGELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIV 189
A G L+EY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV
Sbjct: 3 ASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIV 62
Query: 190 SIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAH 369
++ EKSP+++KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAH
Sbjct: 63 YCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTAAGAVTQCYRDMGARHRARAH 122
Query: 370 SIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 531
SIQI+KVE I A+ CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 123 SIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 256 bits (628), Expect = 3e-68
Identities = 117/174 (67%), Positives = 141/174 (81%)
Frame = +1
Query: 10 AKGELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIV 189
A G L+EY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV
Sbjct: 3 ASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIV 62
Query: 190 SIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAH 369
++ EKSP+++KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAH
Sbjct: 63 YCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAH 122
Query: 370 SIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 531
SIQI+KVE I A+ CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 123 SIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein
L18a-like protein protein.
Length = 136
Score = 201 bits (491), Expect = 1e-51
Identities = 90/133 (67%), Positives = 111/133 (83%)
Frame = +1
Query: 10 AKGELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIV 189
A G L+EY+V+GR+LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GE V
Sbjct: 3 ASGTLREYKVVGRRLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGETV 62
Query: 190 SIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAH 369
++ EKSP+++KNFGIWLR +SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAH
Sbjct: 63 YCGQVFEKSPLRVKNFGIWLRCDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAH 122
Query: 370 SIQIIKVEVIKAA 408
SIQI+ VE I A+
Sbjct: 123 SIQIMMVEEIAAS 135
>X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA for
ORF. ).
Length = 140
Score = 171 bits (417), Expect = 1e-42
Identities = 77/111 (69%), Positives = 90/111 (81%)
Frame = +1
Query: 199 EIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQ 378
++ EKSP+++KNFGIWL Y+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQ
Sbjct: 30 QVFEKSPLRVKNFGIWLSYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQ 89
Query: 379 IIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 531
I+KVE I + CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 90 IMKVEEIAVSKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 140
>AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a
protein.
Length = 66
Score = 94.7 bits (225), Expect = 2e-19
Identities = 45/66 (68%), Positives = 51/66 (77%)
Frame = +1
Query: 334 RDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYK 513
RDMGARHRARAHSIQI+KVE I A+ CRRP VKQFH SKI FPLP RV + + F K
Sbjct: 1 RDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTK 60
Query: 514 RPSTYF 531
RP+T+F
Sbjct: 61 RPNTFF 66
>U83115-1|AAB53791.1| 1637|Homo sapiens non-lens beta gamma-crystallin
like protein protein.
Length = 1637
Score = 30.7 bits (66), Expect = 3.6
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 5/105 (4%)
Frame = +1
Query: 16 GELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSI 195
G ++ ++ GRK+ ++PK +Y+ F + ++ F+ + + ++ TG+
Sbjct: 1114 GSMRPLKMGGRKVEFPTDPKVVVYEKPFFEGKCVELETGMCSFVMEGGETEEATGD---- 1169
Query: 196 KEIPEKSPVKIKNF-GIWLRYESRSGVHNMY----REYRDLSVGG 315
+P S +K GIW+ YE + Y EYRD G
Sbjct: 1170 DHLPFTSVGSMKVLRGIWVAYEKPGFTGHQYLLEEGEYRDWKAWG 1214
>AL390074-1|CAH72091.1| 1723|Homo sapiens absent in melanoma 1
protein.
Length = 1723
Score = 30.7 bits (66), Expect = 3.6
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 5/105 (4%)
Frame = +1
Query: 16 GELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSI 195
G ++ ++ GRK+ ++PK +Y+ F + ++ F+ + + ++ TG+
Sbjct: 1200 GSMRPLKMGGRKVEFPTDPKVVVYEKPFFEGKCVELETGMCSFVMEGGETEEATGD---- 1255
Query: 196 KEIPEKSPVKIKNF-GIWLRYESRSGVHNMY----REYRDLSVGG 315
+P S +K GIW+ YE + Y EYRD G
Sbjct: 1256 DHLPFTSVGSMKVLRGIWVAYEKPGFTGHQYLLEEGEYRDWKAWG 1300
>AL359292-2|CAI21046.1| 1723|Homo sapiens absent in melanoma 1
protein.
Length = 1723
Score = 30.7 bits (66), Expect = 3.6
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 5/105 (4%)
Frame = +1
Query: 16 GELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSI 195
G ++ ++ GRK+ ++PK +Y+ F + ++ F+ + + ++ TG+
Sbjct: 1200 GSMRPLKMGGRKVEFPTDPKVVVYEKPFFEGKCVELETGMCSFVMEGGETEEATGD---- 1255
Query: 196 KEIPEKSPVKIKNF-GIWLRYESRSGVHNMY----REYRDLSVGG 315
+P S +K GIW+ YE + Y EYRD G
Sbjct: 1256 DHLPFTSVGSMKVLRGIWVAYEKPGFTGHQYLLEEGEYRDWKAWG 1300
>U20938-1|AAB51366.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 29.5 bits (63), Expect = 8.4
Identities = 13/31 (41%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +3
Query: 78 SSIQNEDF-LS*SYCGKISFLVFLEAVEEVQ 167
S+IQN+DF + YC + L++L+++EE+Q
Sbjct: 817 SAIQNQDFTVIEDYCTGLKALLYLKSIEELQ 847
>U09178-1|AAA57474.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 29.5 bits (63), Expect = 8.4
Identities = 13/31 (41%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +3
Query: 78 SSIQNEDF-LS*SYCGKISFLVFLEAVEEVQ 167
S+IQN+DF + YC + L++L+++EE+Q
Sbjct: 817 SAIQNQDFTVIEDYCTGLKALLYLKSIEELQ 847
>BX908805-1|CAI15125.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 29.5 bits (63), Expect = 8.4
Identities = 13/31 (41%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +3
Query: 78 SSIQNEDF-LS*SYCGKISFLVFLEAVEEVQ 167
S+IQN+DF + YC + L++L+++EE+Q
Sbjct: 817 SAIQNQDFTVIEDYCTGLKALLYLKSIEELQ 847
>BC131778-1|AAI31779.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 29.5 bits (63), Expect = 8.4
Identities = 13/31 (41%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +3
Query: 78 SSIQNEDF-LS*SYCGKISFLVFLEAVEEVQ 167
S+IQN+DF + YC + L++L+++EE+Q
Sbjct: 817 SAIQNQDFTVIEDYCTGLKALLYLKSIEELQ 847
>BC131777-1|AAI31778.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 29.5 bits (63), Expect = 8.4
Identities = 13/31 (41%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +3
Query: 78 SSIQNEDF-LS*SYCGKISFLVFLEAVEEVQ 167
S+IQN+DF + YC + L++L+++EE+Q
Sbjct: 817 SAIQNQDFTVIEDYCTGLKALLYLKSIEELQ 847
>AL356457-3|CAH70570.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 29.5 bits (63), Expect = 8.4
Identities = 13/31 (41%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +3
Query: 78 SSIQNEDF-LS*SYCGKISFLVFLEAVEEVQ 167
S+IQN+DF + YC + L++L+++EE+Q
Sbjct: 817 SAIQNQDFTVIEDYCTGLKALLYLKSIEELQ 847
>AB003063-1|BAA89789.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 29.5 bits (63), Expect = 8.4
Identities = 13/31 (41%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +3
Query: 78 SSIQNEDF-LS*SYCGKISFLVFLEAVEEVQ 167
S+IQN+DF + YC + L++L+++EE+Q
Sbjct: 817 SAIQNQDFTVIEDYCTGLKALLYLKSIEELQ 847
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,265,335
Number of Sequences: 237096
Number of extensions: 1692845
Number of successful extensions: 3817
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3817
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5590411794
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -