Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_F17
(373 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66494-10|CAF31472.1| 500|Caenorhabditis elegans Hypothetical p... 77 5e-15
Z66494-9|CAA91260.1| 502|Caenorhabditis elegans Hypothetical pr... 77 5e-15
AF314195-1|AAK01173.1| 820|Caenorhabditis elegans OSM-5 protein. 34 0.028
AC006761-7|AAF60551.2| 820|Caenorhabditis elegans Osmotic avoid... 34 0.028
U40060-5|AAA81143.2| 690|Caenorhabditis elegans Hypothetical pr... 30 0.46
Z48334-6|CAA88313.1| 655|Caenorhabditis elegans Hypothetical pr... 29 1.1
AF314467-1|AAG41979.1| 655|Caenorhabditis elegans APC6 protein. 29 1.1
AF016444-5|AAB65932.1| 330|Caenorhabditis elegans Serpentine re... 29 1.4
U77412-1|AAB63465.1| 1151|Caenorhabditis elegans O-linked GlcNAc... 28 1.9
U21320-2|ABC71824.1| 973|Caenorhabditis elegans O-linked glcnac... 28 1.9
U21320-1|AAA62535.2| 1151|Caenorhabditis elegans O-linked glcnac... 28 1.9
Z22179-14|CAI06052.1| 443|Caenorhabditis elegans Hypothetical p... 27 5.7
U64856-4|AAB04988.2| 506|Caenorhabditis elegans Bbs (bardet-bie... 27 5.7
Z81540-5|CAB04405.2| 946|Caenorhabditis elegans Hypothetical pr... 26 7.5
Z81059-5|CAJ15164.1| 176|Caenorhabditis elegans Hypothetical pr... 26 7.5
U41533-7|AAA83170.1| 337|Caenorhabditis elegans Small glutamine... 26 7.5
U70852-14|AAM98014.1| 783|Caenorhabditis elegans Gei-4(four) in... 26 9.9
U70852-13|AAM98015.1| 788|Caenorhabditis elegans Gei-4(four) in... 26 9.9
AF000196-4|AAC24254.2| 429|Caenorhabditis elegans Hypothetical ... 26 9.9
>Z66494-10|CAF31472.1| 500|Caenorhabditis elegans Hypothetical
protein C34C6.6b protein.
Length = 500
Score = 76.6 bits (180), Expect = 5e-15
Identities = 34/58 (58%), Positives = 43/58 (74%)
Frame = +2
Query: 8 GATLANSDRSEEAVEAYHEALNLEPGFIRARYNVGITCMNLGAYRQAAEHFLVALNQQ 181
GATLAN D + EA+ AY EAL L P ++RARYN+GI+CM L +Y +A +HFL AL Q
Sbjct: 399 GATLANGDHTAEAISAYREALKLYPTYVRARYNLGISCMQLSSYDEALKHFLSALELQ 456
>Z66494-9|CAA91260.1| 502|Caenorhabditis elegans Hypothetical
protein C34C6.6a protein.
Length = 502
Score = 76.6 bits (180), Expect = 5e-15
Identities = 34/58 (58%), Positives = 43/58 (74%)
Frame = +2
Query: 8 GATLANSDRSEEAVEAYHEALNLEPGFIRARYNVGITCMNLGAYRQAAEHFLVALNQQ 181
GATLAN D + EA+ AY EAL L P ++RARYN+GI+CM L +Y +A +HFL AL Q
Sbjct: 401 GATLANGDHTAEAISAYREALKLYPTYVRARYNLGISCMQLSSYDEALKHFLSALELQ 458
>AF314195-1|AAK01173.1| 820|Caenorhabditis elegans OSM-5 protein.
Length = 820
Score = 34.3 bits (75), Expect = 0.028
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 38 EEAVEAYHEALNLEPGFIRARYNVGITCMNLGAYRQAAEHF 160
++A+ Y EALN + ++A +N+G+T G QA E F
Sbjct: 490 DKALNNYREALNNDASCVQALFNIGLTAKAQGNLEQALEFF 530
>AC006761-7|AAF60551.2| 820|Caenorhabditis elegans Osmotic
avoidance abnormal protein5 protein.
Length = 820
Score = 34.3 bits (75), Expect = 0.028
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 38 EEAVEAYHEALNLEPGFIRARYNVGITCMNLGAYRQAAEHF 160
++A+ Y EALN + ++A +N+G+T G QA E F
Sbjct: 490 DKALNNYREALNNDASCVQALFNIGLTAKAQGNLEQALEFF 530
>U40060-5|AAA81143.2| 690|Caenorhabditis elegans Hypothetical
protein F38B6.6 protein.
Length = 690
Score = 30.3 bits (65), Expect = 0.46
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +2
Query: 8 GATLANSDRSEEAVEAYHEALNLEPGFIRARYNVGITCMNLGAYRQA 148
G L S S+ A A+ L P F A N+GI+ MNL Y +A
Sbjct: 473 GNLLEKSGDSKTAESLLARAVTLRPSFAVAWMNLGISQMNLKKYYEA 519
>Z48334-6|CAA88313.1| 655|Caenorhabditis elegans Hypothetical
protein F10B5.6 protein.
Length = 655
Score = 29.1 bits (62), Expect = 1.1
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 32 RSEEAVEAYHEALNLEPGFIRARYNVGITCMNLGAYRQAAEHFLVAL 172
R EA+ Y +A+ +EP F+ A + + LG +A E F AL
Sbjct: 510 RLNEAIMFYQKAIRMEPKFVDAIASTALCYAVLGNIDKATEFFNKAL 556
>AF314467-1|AAG41979.1| 655|Caenorhabditis elegans APC6 protein.
Length = 655
Score = 29.1 bits (62), Expect = 1.1
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 32 RSEEAVEAYHEALNLEPGFIRARYNVGITCMNLGAYRQAAEHFLVAL 172
R EA+ Y +A+ +EP F+ A + + LG +A E F AL
Sbjct: 510 RLNEAIMFYQKAIRMEPKFVDAIASTALCYAVLGNIDKATEFFNKAL 556
>AF016444-5|AAB65932.1| 330|Caenorhabditis elegans Serpentine
receptor, class ab (class a-like) protein 6 protein.
Length = 330
Score = 28.7 bits (61), Expect = 1.4
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 74 LEPGFIRARYNVGITCMNLGAYRQAAEHFLVALNQQYKAKGM 199
++PGF+ I C+ + + HFL LN++ +AKG+
Sbjct: 180 VKPGFVTNIEKAFIGCLIIQIGGRIIFHFLFKLNEELRAKGL 221
>U77412-1|AAB63465.1| 1151|Caenorhabditis elegans O-linked GlcNAc
transferase protein.
Length = 1151
Score = 28.3 bits (60), Expect = 1.9
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 44 AVEAYHEALNLEPGFIRARYNVGITCMNLGAYRQAAEHFLVALN 175
A+ + +A+ L+P F+ A N+G + +A +L ALN
Sbjct: 314 AIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVSAYLRALN 357
Score = 26.6 bits (56), Expect = 5.7
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +2
Query: 8 GATLANSDRSEEAVEAYHEALNLEPGFIRARYNVGITCMNLGAYRQAAEHF 160
G L R EEA Y +A+ +P F A N+G + G A HF
Sbjct: 268 GNLLKAMGRLEEAKVCYLKAIETQPQFAVAWSNLGCVFNSQGEIWLAIHHF 318
>U21320-2|ABC71824.1| 973|Caenorhabditis elegans O-linked glcnac
transferase protein1, isoform b protein.
Length = 973
Score = 28.3 bits (60), Expect = 1.9
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 44 AVEAYHEALNLEPGFIRARYNVGITCMNLGAYRQAAEHFLVALN 175
A+ + +A+ L+P F+ A N+G + +A +L ALN
Sbjct: 136 AIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVSAYLRALN 179
Score = 26.6 bits (56), Expect = 5.7
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +2
Query: 8 GATLANSDRSEEAVEAYHEALNLEPGFIRARYNVGITCMNLGAYRQAAEHF 160
G L R EEA Y +A+ +P F A N+G + G A HF
Sbjct: 90 GNLLKAMGRLEEAKVCYLKAIETQPQFAVAWSNLGCVFNSQGEIWLAIHHF 140
>U21320-1|AAA62535.2| 1151|Caenorhabditis elegans O-linked glcnac
transferase protein1, isoform a protein.
Length = 1151
Score = 28.3 bits (60), Expect = 1.9
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 44 AVEAYHEALNLEPGFIRARYNVGITCMNLGAYRQAAEHFLVALN 175
A+ + +A+ L+P F+ A N+G + +A +L ALN
Sbjct: 314 AIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVSAYLRALN 357
Score = 26.6 bits (56), Expect = 5.7
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +2
Query: 8 GATLANSDRSEEAVEAYHEALNLEPGFIRARYNVGITCMNLGAYRQAAEHF 160
G L R EEA Y +A+ +P F A N+G + G A HF
Sbjct: 268 GNLLKAMGRLEEAKVCYLKAIETQPQFAVAWSNLGCVFNSQGEIWLAIHHF 318
>Z22179-14|CAI06052.1| 443|Caenorhabditis elegans Hypothetical
protein F58A4.14 protein.
Length = 443
Score = 26.6 bits (56), Expect = 5.7
Identities = 17/54 (31%), Positives = 22/54 (40%)
Frame = +2
Query: 8 GATLANSDRSEEAVEAYHEALNLEPGFIRARYNVGITCMNLGAYRQAAEHFLVA 169
G N EEA+E +H+A L R Y G LG ++ A E A
Sbjct: 96 GLIARNEGELEEAMECFHKAYELSGKNKRYFYETGRCNFLLGRHQIAVEQLTKA 149
>U64856-4|AAB04988.2| 506|Caenorhabditis elegans Bbs (bardet-biedl
syndrome) proteinprotein 8 protein.
Length = 506
Score = 26.6 bits (56), Expect = 5.7
Identities = 11/39 (28%), Positives = 16/39 (41%)
Frame = +2
Query: 38 EEAVEAYHEALNLEPGFIRARYNVGITCMNLGAYRQAAE 154
+EA Y A + P YN+G+ G Y + E
Sbjct: 439 DEARSLYSSATSKNPYMFEGNYNLGLVSFTQGKYHECRE 477
>Z81540-5|CAB04405.2| 946|Caenorhabditis elegans Hypothetical
protein F46B3.5 protein.
Length = 946
Score = 26.2 bits (55), Expect = 7.5
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +2
Query: 17 LANSDRSEEAVEAYHEALNLEPGFIRARYNVGITCMN 127
L +S+ E +H+ L LE RA Y VG C N
Sbjct: 386 LGSSETKFPDEEPFHKELQLEESGDRAGYPVGSHCSN 422
>Z81059-5|CAJ15164.1| 176|Caenorhabditis elegans Hypothetical
protein F11F1.8 protein.
Length = 176
Score = 26.2 bits (55), Expect = 7.5
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +2
Query: 284 DVAKLVDERNLTEINKFFEMN 346
D++K+VD++NLT + K +N
Sbjct: 120 DLSKIVDDKNLTSVEKIDAIN 140
>U41533-7|AAA83170.1| 337|Caenorhabditis elegans Small
glutamine-rich tetratricorepeat protein protein 1
protein.
Length = 337
Score = 26.2 bits (55), Expect = 7.5
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 8 GATLANSDRSEEAVEAYHEALNLEP 82
G + +R E A EAY +AL LEP
Sbjct: 179 GLAYSCQNRYEHAAEAYKKALELEP 203
>U70852-14|AAM98014.1| 783|Caenorhabditis elegans Gei-4(four)
interacting proteinprotein 4, isoform a protein.
Length = 783
Score = 25.8 bits (54), Expect = 9.9
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = -2
Query: 339 SKNLLISVRFLSSTNFATSCSPINEQTIRKVVHMLEEVESVFVESGYIPLALYC*LSATK 160
S +++ S RFLS +F T + +NE ++ + E+ ++P LS TK
Sbjct: 676 SFSMIRSKRFLSKQSFVTWSTAVNE-----AFQIVSQWNGSLEEADFVPKF----LSETK 726
Query: 159 KCSA 148
KC A
Sbjct: 727 KCGA 730
>U70852-13|AAM98015.1| 788|Caenorhabditis elegans Gei-4(four)
interacting proteinprotein 4, isoform b protein.
Length = 788
Score = 25.8 bits (54), Expect = 9.9
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = -2
Query: 339 SKNLLISVRFLSSTNFATSCSPINEQTIRKVVHMLEEVESVFVESGYIPLALYC*LSATK 160
S +++ S RFLS +F T + +NE ++ + E+ ++P LS TK
Sbjct: 681 SFSMIRSKRFLSKQSFVTWSTAVNE-----AFQIVSQWNGSLEEADFVPKF----LSETK 731
Query: 159 KCSA 148
KC A
Sbjct: 732 KCGA 735
>AF000196-4|AAC24254.2| 429|Caenorhabditis elegans Hypothetical
protein B0041.5 protein.
Length = 429
Score = 25.8 bits (54), Expect = 9.9
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = -2
Query: 339 SKNLLISVRFLSSTNFATSCSPINEQTIRKVVHMLEEVESVFVE 208
S +LI+ + S N+ SC + + V + +VESV V+
Sbjct: 77 SYKILITENSIDSENYEISCESLALEGYESVTDVDSDVESVIVD 120
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,337,158
Number of Sequences: 27780
Number of extensions: 124329
Number of successful extensions: 239
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 239
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 535612900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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