Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_F14
         (536 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      22   3.5  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   4.6  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   8.0  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   8.0  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   8.0  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 204 LRLRLSHLFHGKLL 245
           L +RLSH  HG LL
Sbjct: 353 LAMRLSHPLHGNLL 366


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +3

Query: 252 VYNIPASNVVDIYRKKYDESSDESFIIKIYQLI 350
           +YNI +  +    ++K D++ DES +  I+Q I
Sbjct: 278 IYNIISEIIETTIQEKRDDAKDES-VEAIFQSI 309


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 320 IFYHKDLPVDRA 355
           +F+H+D PV RA
Sbjct: 537 LFHHRDTPVVRA 548


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 3   TRGQSKDTMNNNSNEATN 56
           TR  + D  NNN N+  N
Sbjct: 581 TRCANSDNQNNNQNKHNN 598


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 320 IFYHKDLPVDRA 355
           +F+H+D PV RA
Sbjct: 627 LFHHRDTPVVRA 638


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,840
Number of Sequences: 438
Number of extensions: 2681
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15213684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)