Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_F06
(506 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17886-1|AAA36471.1| 114|Homo sapiens protein ( Human acidic ri... 74 3e-13
CR450339-1|CAG29335.1| 114|Homo sapiens RPLP1 protein. 74 3e-13
BC007590-1|AAH07590.1| 114|Homo sapiens ribosomal protein, larg... 74 3e-13
BC003369-1|AAH03369.1| 114|Homo sapiens ribosomal protein, larg... 74 3e-13
AB061836-1|BAB79474.1| 114|Homo sapiens ribosomal protein P1 pr... 74 3e-13
CR542209-1|CAG47005.1| 114|Homo sapiens RPLP1 protein. 72 1e-12
AY303789-1|AAP68820.1| 113|Homo sapiens acidic ribosomal phosph... 72 1e-12
X87832-1|CAB57274.1| 1754|Homo sapiens NOV/plexin-A1 protein pro... 31 3.1
>M17886-1|AAA36471.1| 114|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P1 mRNA, complete cds. ).
Length = 114
Score = 74.1 bits (174), Expect = 3e-13
Identities = 37/97 (38%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Frame = +2
Query: 125 NNDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSG---VXXXXXXX 295
+++V VT +KI+ ++KAA V+VEP+WPGLFAKAL +N+ LI N+G+G
Sbjct: 18 DDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPA 77
Query: 296 XXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFGLFD 406
DDDMGFGLFD
Sbjct: 78 GGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
Score = 29.9 bits (64), Expect = 5.3
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 75 MASKAELACVYSALIL 122
MAS +ELAC+YSALIL
Sbjct: 1 MASVSELACIYSALIL 16
>CR450339-1|CAG29335.1| 114|Homo sapiens RPLP1 protein.
Length = 114
Score = 74.1 bits (174), Expect = 3e-13
Identities = 37/97 (38%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Frame = +2
Query: 125 NNDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSG---VXXXXXXX 295
+++V VT +KI+ ++KAA V+VEP+WPGLFAKAL +N+ LI N+G+G
Sbjct: 18 DDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPA 77
Query: 296 XXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFGLFD 406
DDDMGFGLFD
Sbjct: 78 GGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
Score = 29.5 bits (63), Expect = 7.1
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +3
Query: 75 MASKAELACVYSALIL 122
MAS +ELAC+YSAL+L
Sbjct: 1 MASVSELACIYSALVL 16
>BC007590-1|AAH07590.1| 114|Homo sapiens ribosomal protein, large,
P1 protein.
Length = 114
Score = 74.1 bits (174), Expect = 3e-13
Identities = 37/97 (38%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Frame = +2
Query: 125 NNDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSG---VXXXXXXX 295
+++V VT +KI+ ++KAA V+VEP+WPGLFAKAL +N+ LI N+G+G
Sbjct: 18 DDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPA 77
Query: 296 XXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFGLFD 406
DDDMGFGLFD
Sbjct: 78 GGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
Score = 29.9 bits (64), Expect = 5.3
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 75 MASKAELACVYSALIL 122
MAS +ELAC+YSALIL
Sbjct: 1 MASVSELACIYSALIL 16
>BC003369-1|AAH03369.1| 114|Homo sapiens ribosomal protein, large,
P1 protein.
Length = 114
Score = 74.1 bits (174), Expect = 3e-13
Identities = 37/97 (38%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Frame = +2
Query: 125 NNDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSG---VXXXXXXX 295
+++V VT +KI+ ++KAA V+VEP+WPGLFAKAL +N+ LI N+G+G
Sbjct: 18 DDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPA 77
Query: 296 XXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFGLFD 406
DDDMGFGLFD
Sbjct: 78 GGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
Score = 29.9 bits (64), Expect = 5.3
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 75 MASKAELACVYSALIL 122
MAS +ELAC+YSALIL
Sbjct: 1 MASVSELACIYSALIL 16
>AB061836-1|BAB79474.1| 114|Homo sapiens ribosomal protein P1
protein.
Length = 114
Score = 74.1 bits (174), Expect = 3e-13
Identities = 37/97 (38%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Frame = +2
Query: 125 NNDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSG---VXXXXXXX 295
+++V VT +KI+ ++KAA V+VEP+WPGLFAKAL +N+ LI N+G+G
Sbjct: 18 DDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPA 77
Query: 296 XXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFGLFD 406
DDDMGFGLFD
Sbjct: 78 GGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
Score = 29.9 bits (64), Expect = 5.3
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 75 MASKAELACVYSALIL 122
MAS +ELAC+YSALIL
Sbjct: 1 MASVSELACIYSALIL 16
>CR542209-1|CAG47005.1| 114|Homo sapiens RPLP1 protein.
Length = 114
Score = 72.1 bits (169), Expect = 1e-12
Identities = 36/97 (37%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Frame = +2
Query: 125 NNDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSG---VXXXXXXX 295
+++V VT +KI+ ++KAA V+VEP+WPGLFAKAL +N+ LI ++G+G
Sbjct: 18 DDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICDVGAGGPAPAAGAAPA 77
Query: 296 XXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFGLFD 406
DDDMGFGLFD
Sbjct: 78 GGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
>AY303789-1|AAP68820.1| 113|Homo sapiens acidic ribosomal
phosphoprotein P1 protein.
Length = 113
Score = 71.7 bits (168), Expect = 1e-12
Identities = 36/96 (37%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Frame = +2
Query: 125 NNDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSG---VXXXXXXX 295
+++V VT +KI+ ++KAA V+VEP+WPGLFAKAL +N+ LI N+G+G
Sbjct: 18 DDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPA 77
Query: 296 XXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFGLF 403
DDDMGFGLF
Sbjct: 78 GGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFGLF 113
Score = 29.9 bits (64), Expect = 5.3
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 75 MASKAELACVYSALIL 122
MAS +ELAC+YSALIL
Sbjct: 1 MASVSELACIYSALIL 16
>X87832-1|CAB57274.1| 1754|Homo sapiens NOV/plexin-A1 protein
protein.
Length = 1754
Score = 30.7 bits (66), Expect = 3.1
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -1
Query: 257 WLLNHEH*CPPRPLQIDQASTAQHLQQPL 171
WLLN E C PLQID Q QPL
Sbjct: 365 WLLNKELGCINSPLQIDDDFRGQDFNQPL 393
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,473,852
Number of Sequences: 237096
Number of extensions: 991270
Number of successful extensions: 1449
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1449
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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