Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_F04
(435 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12202-2|AAB08007.1| 130|Homo sapiens ribosomal protein S24 pro... 217 1e-56
U12202-1|AAB08006.1| 133|Homo sapiens ribosomal protein S24 pro... 217 1e-56
M31520-2|AAA36588.1| 133|Homo sapiens ribosomal protein S24 pro... 217 1e-56
BC071926-1|AAH71926.1| 130|Homo sapiens ribosomal protein S24 p... 217 1e-56
BC000523-1|AAH00523.1| 130|Homo sapiens ribosomal protein S24 p... 217 1e-56
AL512628-3|CAI16468.1| 133|Homo sapiens ribosomal protein S24 p... 217 1e-56
AL512628-2|CAI16467.1| 130|Homo sapiens ribosomal protein S24 p... 217 1e-56
BX537975-1|CAD97939.1| 132|Homo sapiens hypothetical protein pr... 215 4e-56
BC004173-1|AAH04173.1| 1500|Homo sapiens ANKRD17 protein protein. 35 0.14
BC048271-1|AAH48271.1| 611|Homo sapiens ZC3H11A protein protein. 33 0.32
AF271256-1|AAK58397.1| 42|Homo sapiens HBV preS1(21-47) bindin... 32 0.98
AK127997-1|BAC87222.1| 148|Homo sapiens protein ( Homo sapiens ... 31 1.3
U91930-1|AAD03777.1| 1112|Homo sapiens AP-3 complex delta subuni... 31 1.7
AC005545-2|AAC34214.1| 1079|Homo sapiens AP-3 complex delta subu... 31 1.7
AB208804-1|BAD92041.1| 1284|Homo sapiens Adapter-related protein... 31 1.7
AK000295-1|BAA91063.1| 686|Homo sapiens protein ( Homo sapiens ... 31 2.3
AB014597-1|BAA31672.2| 2486|Homo sapiens KIAA0697 protein protein. 30 3.0
Z84487-2|CAI42674.1| 2492|Homo sapiens alpha thalassemia/mental ... 29 5.2
Z84487-1|CAI42675.1| 2454|Homo sapiens alpha thalassemia/mental ... 29 5.2
U97103-1|AAC51657.1| 2375|Homo sapiens X-linked nuclear protein ... 29 5.2
U75653-1|AAC51655.1| 2492|Homo sapiens zinc finger helicase prot... 29 5.2
U72938-1|AAB49971.2| 2454|Homo sapiens putative DNA dependent AT... 29 5.2
U72937-1|AAB49970.2| 2492|Homo sapiens putative DNA dependent AT... 29 5.2
U72936-1|AAB49969.1| 2288|Homo sapiens putative DNA dependent AT... 29 5.2
U72935-3|AAB40700.1| 2288|Homo sapiens putative DNA dependent AT... 29 5.2
U72935-2|AAB40699.1| 2337|Homo sapiens putative DNA dependent AT... 29 5.2
U72935-1|AAB40698.1| 2375|Homo sapiens putative DNA dependent AT... 29 5.2
U09820-1|AAC50069.1| 1641|Homo sapiens helicase II protein. 29 5.2
EF467914-1|ABO43036.1| 2492|Homo sapiens alpha thalassemia/menta... 29 5.2
AL121874-2|CAI40710.1| 2492|Homo sapiens alpha thalassemia/menta... 29 5.2
AL121874-1|CAB90351.2| 2454|Homo sapiens alpha thalassemia/menta... 29 5.2
AL109753-2|CAI43115.1| 2492|Homo sapiens alpha thalassemia/menta... 29 5.2
AL109753-1|CAI43116.1| 2454|Homo sapiens alpha thalassemia/menta... 29 5.2
AK025632-1|BAB15196.1| 720|Homo sapiens protein ( Homo sapiens ... 29 5.2
AB209545-1|BAD92782.1| 1224|Homo sapiens transcriptional regulat... 29 5.2
AB208928-1|BAD92165.1| 1383|Homo sapiens transcriptional regulat... 29 5.2
AB102641-1|BAC81110.1| 2492|Homo sapiens ATRX protein. 29 5.2
AY684169-1|AAT74627.1| 3052|Homo sapiens REV3-like, catalytic su... 29 6.9
AL512325-1|CAI20998.1| 3130|Homo sapiens REV3-like, catalytic su... 29 6.9
AL136310-2|CAI20509.1| 3130|Homo sapiens REV3-like, catalytic su... 29 6.9
AL080317-2|CAI19192.1| 3130|Homo sapiens REV3-like, catalytic su... 29 6.9
AK025859-1|BAB15260.1| 460|Homo sapiens protein ( Homo sapiens ... 29 6.9
AF179429-1|AAG09403.1| 3052|Homo sapiens DNA polymerase zeta cat... 29 6.9
AF179428-1|AAG09402.1| 3052|Homo sapiens DNA polymerase zeta cat... 29 6.9
AF157476-1|AAD40184.1| 3130|Homo sapiens DNA polymerase zeta cat... 29 6.9
AF078695-1|AAC28460.1| 3052|Homo sapiens DNA polymerase zeta cat... 29 6.9
AF071798-1|AAC24009.1| 3130|Homo sapiens DNA polymerase zeta cat... 29 6.9
AF058701-1|AAC24357.1| 3130|Homo sapiens DNA polymerase zeta cat... 29 6.9
AF035537-1|AAB88486.1| 3052|Homo sapiens DNA polymerase zeta pro... 29 6.9
AF521883-1|AAO14944.1| 2617|Homo sapiens multiple ankyrin repeat... 29 9.1
AF521882-1|AAO14943.1| 2542|Homo sapiens multiple ankyrin repeat... 29 9.1
>U12202-2|AAB08007.1| 130|Homo sapiens ribosomal protein S24
protein.
Length = 130
Score = 217 bits (530), Expect = 1e-56
Identities = 101/122 (82%), Positives = 110/122 (90%)
Frame = +1
Query: 70 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 249
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 250 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKS 429
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT K+
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGTAKA 123
Query: 430 KV 435
V
Sbjct: 124 NV 125
>U12202-1|AAB08006.1| 133|Homo sapiens ribosomal protein S24
protein.
Length = 133
Score = 217 bits (530), Expect = 1e-56
Identities = 101/122 (82%), Positives = 110/122 (90%)
Frame = +1
Query: 70 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 249
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 250 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKS 429
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT K+
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGTAKA 123
Query: 430 KV 435
V
Sbjct: 124 NV 125
>M31520-2|AAA36588.1| 133|Homo sapiens ribosomal protein S24
protein.
Length = 133
Score = 217 bits (530), Expect = 1e-56
Identities = 101/122 (82%), Positives = 110/122 (90%)
Frame = +1
Query: 70 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 249
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 250 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKS 429
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT K+
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGTAKA 123
Query: 430 KV 435
V
Sbjct: 124 NV 125
>BC071926-1|AAH71926.1| 130|Homo sapiens ribosomal protein S24
protein.
Length = 130
Score = 217 bits (530), Expect = 1e-56
Identities = 101/122 (82%), Positives = 110/122 (90%)
Frame = +1
Query: 70 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 249
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 250 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKS 429
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT K+
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGTAKA 123
Query: 430 KV 435
V
Sbjct: 124 NV 125
>BC000523-1|AAH00523.1| 130|Homo sapiens ribosomal protein S24
protein.
Length = 130
Score = 217 bits (530), Expect = 1e-56
Identities = 101/122 (82%), Positives = 110/122 (90%)
Frame = +1
Query: 70 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 249
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 250 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKS 429
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT K+
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGTAKA 123
Query: 430 KV 435
V
Sbjct: 124 NV 125
>AL512628-3|CAI16468.1| 133|Homo sapiens ribosomal protein S24
protein.
Length = 133
Score = 217 bits (530), Expect = 1e-56
Identities = 101/122 (82%), Positives = 110/122 (90%)
Frame = +1
Query: 70 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 249
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 250 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKS 429
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT K+
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGTAKA 123
Query: 430 KV 435
V
Sbjct: 124 NV 125
>AL512628-2|CAI16467.1| 130|Homo sapiens ribosomal protein S24
protein.
Length = 130
Score = 217 bits (530), Expect = 1e-56
Identities = 101/122 (82%), Positives = 110/122 (90%)
Frame = +1
Query: 70 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 249
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 250 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKS 429
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT K+
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGTAKA 123
Query: 430 KV 435
V
Sbjct: 124 NV 125
>BX537975-1|CAD97939.1| 132|Homo sapiens hypothetical protein
protein.
Length = 132
Score = 215 bits (526), Expect = 4e-56
Identities = 100/122 (81%), Positives = 110/122 (90%)
Frame = +1
Query: 70 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 249
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 250 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKS 429
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +R+QRKERKNRMKKVRGT K+
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSREQRKERKNRMKKVRGTAKA 123
Query: 430 KV 435
V
Sbjct: 124 NV 125
>BC004173-1|AAH04173.1| 1500|Homo sapiens ANKRD17 protein protein.
Length = 1500
Score = 34.7 bits (76), Expect = 0.14
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +1
Query: 277 ALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKK 408
+++ + LDL K E RLA EKK+ +K++K++K + KK
Sbjct: 1457 SILLEELDLEKLREESRRLALAAKREKKKKKKKKKKKKKKKKKK 1500
>BC048271-1|AAH48271.1| 611|Homo sapiens ZC3H11A protein protein.
Length = 611
Score = 33.5 bits (73), Expect = 0.32
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +1
Query: 259 GKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 432
G++TG + + + KH + G +KK+ +K++K++K + KK + KK K
Sbjct: 544 GETTGVDITKIQVKRCETMREKHMQKQPGNGKKKKKKKKKKKKKKKKKKKKKKKKKKK 601
>AF271256-1|AAK58397.1| 42|Homo sapiens HBV preS1(21-47) binding
protein protein.
Length = 42
Score = 31.9 bits (69), Expect = 0.98
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +1
Query: 352 EKKRPTRKQRKERKNRMKKVRGTKKSK 432
E+K+ +K++KERK R KK + KK K
Sbjct: 6 ERKKERKKEKKERKKRKKKEKERKKEK 32
>AK127997-1|BAC87222.1| 148|Homo sapiens protein ( Homo sapiens
cDNA FLJ46115 fis, clone TESTI2037085. ).
Length = 148
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +1
Query: 307 KKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 432
KK + K + + +KK+ +K++K++KN+ KK + KK K
Sbjct: 37 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKK 78
>U91930-1|AAD03777.1| 1112|Homo sapiens AP-3 complex delta subunit
protein.
Length = 1112
Score = 31.1 bits (67), Expect = 1.7
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 352 EKKRPTRKQRKERKNRMKKVRGTKKSK 432
+KK P K++K RK + ++ +G KKSK
Sbjct: 825 DKKSPKPKKKKHRKEKEERTKGKKKSK 851
>AC005545-2|AAC34214.1| 1079|Homo sapiens AP-3 complex delta
subunit, partial CDS protein.
Length = 1079
Score = 31.1 bits (67), Expect = 1.7
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 352 EKKRPTRKQRKERKNRMKKVRGTKKSK 432
+KK P K++K RK + ++ +G KKSK
Sbjct: 792 DKKSPKPKKKKHRKEKEERTKGKKKSK 818
>AB208804-1|BAD92041.1| 1284|Homo sapiens Adapter-related protein
complex 3 delta 1 subunit variant protein.
Length = 1284
Score = 31.1 bits (67), Expect = 1.7
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 352 EKKRPTRKQRKERKNRMKKVRGTKKSK 432
+KK P K++K RK + ++ +G KKSK
Sbjct: 997 DKKSPKPKKKKHRKEKEERTKGKKKSK 1023
>AK000295-1|BAA91063.1| 686|Homo sapiens protein ( Homo sapiens
cDNA FLJ20288 fis, clone HEP04414. ).
Length = 686
Score = 30.7 bits (66), Expect = 2.3
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +1
Query: 277 ALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKK 408
+++ LDL K E + A EK++ RK++K++K + KK
Sbjct: 640 SILLKELDLEKSREESRKQALAAKREKRKEKRKKKKKKKKKKKK 683
>AB014597-1|BAA31672.2| 2486|Homo sapiens KIAA0697 protein protein.
Length = 2486
Score = 30.3 bits (65), Expect = 3.0
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 277 ALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNR 399
+++ + LDL K E RLA EK++ R+++KE + R
Sbjct: 1340 SILLEELDLEKLREESRRLALAAKREKRKEKRRKKKEEQRR 1380
>Z84487-2|CAI42674.1| 2492|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2492
Score = 29.5 bits (63), Expect = 5.2
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 304 AKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 435
+KK +HRL RH L + +++K + K+V+G + KV
Sbjct: 1331 SKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKV 1374
>Z84487-1|CAI42675.1| 2454|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2454
Score = 29.5 bits (63), Expect = 5.2
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 304 AKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 435
+KK +HRL RH L + +++K + K+V+G + KV
Sbjct: 1293 SKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKV 1336
>U97103-1|AAC51657.1| 2375|Homo sapiens X-linked nuclear protein
protein.
Length = 2375
Score = 29.5 bits (63), Expect = 5.2
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 304 AKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 435
+KK +HRL RH L + +++K + K+V+G + KV
Sbjct: 1214 SKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKV 1257
>U75653-1|AAC51655.1| 2492|Homo sapiens zinc finger helicase protein.
Length = 2492
Score = 29.5 bits (63), Expect = 5.2
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 304 AKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 435
+KK +HRL RH L + +++K + K+V+G + KV
Sbjct: 1331 SKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKV 1374
>U72938-1|AAB49971.2| 2454|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2454
Score = 29.5 bits (63), Expect = 5.2
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 304 AKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 435
+KK +HRL RH L + +++K + K+V+G + KV
Sbjct: 1293 SKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKV 1336
>U72937-1|AAB49970.2| 2492|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2492
Score = 29.5 bits (63), Expect = 5.2
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 304 AKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 435
+KK +HRL RH L + +++K + K+V+G + KV
Sbjct: 1331 SKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKV 1374
>U72936-1|AAB49969.1| 2288|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2288
Score = 29.5 bits (63), Expect = 5.2
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 304 AKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 435
+KK +HRL RH L + +++K + K+V+G + KV
Sbjct: 1127 SKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKV 1170
>U72935-3|AAB40700.1| 2288|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2288
Score = 29.5 bits (63), Expect = 5.2
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 304 AKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 435
+KK +HRL RH L + +++K + K+V+G + KV
Sbjct: 1127 SKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKV 1170
>U72935-2|AAB40699.1| 2337|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2337
Score = 29.5 bits (63), Expect = 5.2
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 304 AKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 435
+KK +HRL RH L + +++K + K+V+G + KV
Sbjct: 1176 SKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKV 1219
>U72935-1|AAB40698.1| 2375|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2375
Score = 29.5 bits (63), Expect = 5.2
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 304 AKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 435
+KK +HRL RH L + +++K + K+V+G + KV
Sbjct: 1214 SKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKV 1257
>U09820-1|AAC50069.1| 1641|Homo sapiens helicase II protein.
Length = 1641
Score = 29.5 bits (63), Expect = 5.2
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 304 AKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 435
+KK +HRL RH L + +++K + K+V+G + KV
Sbjct: 472 SKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKV 515
>EF467914-1|ABO43036.1| 2492|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked protein.
Length = 2492
Score = 29.5 bits (63), Expect = 5.2
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 304 AKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 435
+KK +HRL RH L + +++K + K+V+G + KV
Sbjct: 1331 SKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKV 1374
>AL121874-2|CAI40710.1| 2492|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2492
Score = 29.5 bits (63), Expect = 5.2
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 304 AKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 435
+KK +HRL RH L + +++K + K+V+G + KV
Sbjct: 1331 SKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKV 1374
>AL121874-1|CAB90351.2| 2454|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2454
Score = 29.5 bits (63), Expect = 5.2
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 304 AKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 435
+KK +HRL RH L + +++K + K+V+G + KV
Sbjct: 1293 SKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKV 1336
>AL109753-2|CAI43115.1| 2492|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2492
Score = 29.5 bits (63), Expect = 5.2
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 304 AKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 435
+KK +HRL RH L + +++K + K+V+G + KV
Sbjct: 1331 SKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKV 1374
>AL109753-1|CAI43116.1| 2454|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2454
Score = 29.5 bits (63), Expect = 5.2
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 304 AKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 435
+KK +HRL RH L + +++K + K+V+G + KV
Sbjct: 1293 SKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKV 1336
>AK025632-1|BAB15196.1| 720|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21979 fis, clone HEP06065. ).
Length = 720
Score = 29.5 bits (63), Expect = 5.2
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 292 TLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 432
++D AKK + +KK+ +K++K++K + KK + KK K
Sbjct: 674 SMDKAKKSITNSDIVSISKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 720
>AB209545-1|BAD92782.1| 1224|Homo sapiens transcriptional regulator
ATRX isoform 1 variant protein.
Length = 1224
Score = 29.5 bits (63), Expect = 5.2
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 304 AKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 435
+KK +HRL RH L + +++K + K+V+G + KV
Sbjct: 628 SKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKV 671
>AB208928-1|BAD92165.1| 1383|Homo sapiens transcriptional regulator
ATRX isoform 2 variant protein.
Length = 1383
Score = 29.5 bits (63), Expect = 5.2
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 304 AKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 435
+KK +HRL RH L + +++K + K+V+G + KV
Sbjct: 1296 SKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKV 1339
>AB102641-1|BAC81110.1| 2492|Homo sapiens ATRX protein.
Length = 2492
Score = 29.5 bits (63), Expect = 5.2
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 304 AKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 435
+KK +HRL RH L + +++K + K+V+G + KV
Sbjct: 1331 SKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKV 1374
>AY684169-1|AAT74627.1| 3052|Homo sapiens REV3-like, catalytic subunit
of DNA polymerase zeta (yeast) protein.
Length = 3052
Score = 29.1 bits (62), Expect = 6.9
Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 2/144 (1%)
Frame = +1
Query: 7 EVGDTCVFTPKSRK*SKMSEGTATIRTRKFMTNRLLARKQMVCDV--LHPGKPTVSKTEI 180
E+G++ T KSRK KMS+ + + + NR RK M+ + + + V TE
Sbjct: 872 EIGESLDGTLKSRKRRKMSKKLPPVIIKYIIINRFRGRKNMLVKLGKIDSKEKQVILTE- 930
Query: 181 REKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKK 360
EK+ K+ P + F +T + + T + + + KH+ A K
Sbjct: 931 -EKMELYKKLAP----LKDFWPKVPDSPATKYPIYPLTPKKSHRRKSKHKSA-------K 978
Query: 361 RPTRKQRKERKNRMKKVRGTKKSK 432
+ T KQ++ +K+ +K +
Sbjct: 979 KKTGKQQRTNNENIKRTLSFRKKR 1002
>AL512325-1|CAI20998.1| 3130|Homo sapiens REV3-like, catalytic subunit
of DNA polymerase zeta (yeast) protein.
Length = 3130
Score = 29.1 bits (62), Expect = 6.9
Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 2/144 (1%)
Frame = +1
Query: 7 EVGDTCVFTPKSRK*SKMSEGTATIRTRKFMTNRLLARKQMVCDV--LHPGKPTVSKTEI 180
E+G++ T KSRK KMS+ + + + NR RK M+ + + + V TE
Sbjct: 950 EIGESLDGTLKSRKRRKMSKKLPPVIIKYIIINRFRGRKNMLVKLGKIDSKEKQVILTE- 1008
Query: 181 REKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKK 360
EK+ K+ P + F +T + + T + + + KH+ A K
Sbjct: 1009 -EKMELYKKLAP----LKDFWPKVPDSPATKYPIYPLTPKKSHRRKSKHKSA-------K 1056
Query: 361 RPTRKQRKERKNRMKKVRGTKKSK 432
+ T KQ++ +K+ +K +
Sbjct: 1057 KKTGKQQRTNNENIKRTLSFRKKR 1080
>AL136310-2|CAI20509.1| 3130|Homo sapiens REV3-like, catalytic subunit
of DNA polymerase zeta (yeast) protein.
Length = 3130
Score = 29.1 bits (62), Expect = 6.9
Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 2/144 (1%)
Frame = +1
Query: 7 EVGDTCVFTPKSRK*SKMSEGTATIRTRKFMTNRLLARKQMVCDV--LHPGKPTVSKTEI 180
E+G++ T KSRK KMS+ + + + NR RK M+ + + + V TE
Sbjct: 950 EIGESLDGTLKSRKRRKMSKKLPPVIIKYIIINRFRGRKNMLVKLGKIDSKEKQVILTE- 1008
Query: 181 REKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKK 360
EK+ K+ P + F +T + + T + + + KH+ A K
Sbjct: 1009 -EKMELYKKLAP----LKDFWPKVPDSPATKYPIYPLTPKKSHRRKSKHKSA-------K 1056
Query: 361 RPTRKQRKERKNRMKKVRGTKKSK 432
+ T KQ++ +K+ +K +
Sbjct: 1057 KKTGKQQRTNNENIKRTLSFRKKR 1080
>AL080317-2|CAI19192.1| 3130|Homo sapiens REV3-like, catalytic subunit
of DNA polymerase zeta (yeast) protein.
Length = 3130
Score = 29.1 bits (62), Expect = 6.9
Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 2/144 (1%)
Frame = +1
Query: 7 EVGDTCVFTPKSRK*SKMSEGTATIRTRKFMTNRLLARKQMVCDV--LHPGKPTVSKTEI 180
E+G++ T KSRK KMS+ + + + NR RK M+ + + + V TE
Sbjct: 950 EIGESLDGTLKSRKRRKMSKKLPPVIIKYIIINRFRGRKNMLVKLGKIDSKEKQVILTE- 1008
Query: 181 REKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKK 360
EK+ K+ P + F +T + + T + + + KH+ A K
Sbjct: 1009 -EKMELYKKLAP----LKDFWPKVPDSPATKYPIYPLTPKKSHRRKSKHKSA-------K 1056
Query: 361 RPTRKQRKERKNRMKKVRGTKKSK 432
+ T KQ++ +K+ +K +
Sbjct: 1057 KKTGKQQRTNNENIKRTLSFRKKR 1080
>AK025859-1|BAB15260.1| 460|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22206 fis, clone HRC01431. ).
Length = 460
Score = 29.1 bits (62), Expect = 6.9
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +1
Query: 277 ALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERK 393
+++ + LDL K E RLA EK++ R+++K++K
Sbjct: 421 SILLEELDLEKLREESRRLALAAKREKRKEKRRKKKKKK 459
>AF179429-1|AAG09403.1| 3052|Homo sapiens DNA polymerase zeta
catalytic subunit variant 2 protein.
Length = 3052
Score = 29.1 bits (62), Expect = 6.9
Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 2/144 (1%)
Frame = +1
Query: 7 EVGDTCVFTPKSRK*SKMSEGTATIRTRKFMTNRLLARKQMVCDV--LHPGKPTVSKTEI 180
E+G++ T KSRK KMS+ + + + NR RK M+ + + + V TE
Sbjct: 872 EIGESLDGTLKSRKRRKMSKKLPPVIIKYIIINRFRGRKNMLVKLGKIDSKEKQVILTE- 930
Query: 181 REKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKK 360
EK+ K+ P + F +T + + T + + + KH+ A K
Sbjct: 931 -EKMELYKKLAP----LKDFWPKVPDSPATKYPIYPLTPKKSHRRKSKHKSA-------K 978
Query: 361 RPTRKQRKERKNRMKKVRGTKKSK 432
+ T KQ++ +K+ +K +
Sbjct: 979 KKTGKQQRTNNENIKRTLSFRKKR 1002
>AF179428-1|AAG09402.1| 3052|Homo sapiens DNA polymerase zeta
catalytic subunit variant 1 protein.
Length = 3052
Score = 29.1 bits (62), Expect = 6.9
Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 2/144 (1%)
Frame = +1
Query: 7 EVGDTCVFTPKSRK*SKMSEGTATIRTRKFMTNRLLARKQMVCDV--LHPGKPTVSKTEI 180
E+G++ T KSRK KMS+ + + + NR RK M+ + + + V TE
Sbjct: 872 EIGESLDGTLKSRKRRKMSKKLPPVIIKYIIINRFRGRKNMLVKLGKIDSKEKQVILTE- 930
Query: 181 REKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKK 360
EK+ K+ P + F +T + + T + + + KH+ A K
Sbjct: 931 -EKMELYKKLAP----LKDFWPKVPDSPATKYPIYPLTPKKSHRRKSKHKSA-------K 978
Query: 361 RPTRKQRKERKNRMKKVRGTKKSK 432
+ T KQ++ +K+ +K +
Sbjct: 979 KKTGKQQRTNNENIKRTLSFRKKR 1002
>AF157476-1|AAD40184.1| 3130|Homo sapiens DNA polymerase zeta
catalytic subunit protein.
Length = 3130
Score = 29.1 bits (62), Expect = 6.9
Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 2/144 (1%)
Frame = +1
Query: 7 EVGDTCVFTPKSRK*SKMSEGTATIRTRKFMTNRLLARKQMVCDV--LHPGKPTVSKTEI 180
E+G++ T KSRK KMS+ + + + NR RK M+ + + + V TE
Sbjct: 950 EIGESLDGTLKSRKRRKMSKKLPPVIIKYIIINRFRGRKNMLVKLGKIDSKEKQVILTE- 1008
Query: 181 REKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKK 360
EK+ K+ P + F +T + + T + + + KH+ A K
Sbjct: 1009 -EKMELYKKLAP----LKDFWPKVPDSPATKYPIYPLTPKKSHRRKSKHKSA-------K 1056
Query: 361 RPTRKQRKERKNRMKKVRGTKKSK 432
+ T KQ++ +K+ +K +
Sbjct: 1057 KKTGKQQRTNNENIKRTLSFRKKR 1080
>AF078695-1|AAC28460.1| 3052|Homo sapiens DNA polymerase zeta
catalytic subunit protein.
Length = 3052
Score = 29.1 bits (62), Expect = 6.9
Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 2/144 (1%)
Frame = +1
Query: 7 EVGDTCVFTPKSRK*SKMSEGTATIRTRKFMTNRLLARKQMVCDV--LHPGKPTVSKTEI 180
E+G++ T KSRK KMS+ + + + NR RK M+ + + + V TE
Sbjct: 872 EIGESLDGTLKSRKRRKMSKKLPPVIIKYIIINRFRGRKNMLVKLGKIDSKEKQVILTE- 930
Query: 181 REKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKK 360
EK+ K+ P + F +T + + T + + + KH+ A K
Sbjct: 931 -EKMELYKKLAP----LKDFWPKVPDSPATKYPIYPLTPKKSHRRKSKHKSA-------K 978
Query: 361 RPTRKQRKERKNRMKKVRGTKKSK 432
+ T KQ++ +K+ +K +
Sbjct: 979 KKTGKQQRTNNENIKRTLSFRKKR 1002
>AF071798-1|AAC24009.1| 3130|Homo sapiens DNA polymerase zeta
catalytic subunit protein.
Length = 3130
Score = 29.1 bits (62), Expect = 6.9
Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 2/144 (1%)
Frame = +1
Query: 7 EVGDTCVFTPKSRK*SKMSEGTATIRTRKFMTNRLLARKQMVCDV--LHPGKPTVSKTEI 180
E+G++ T KSRK KMS+ + + + NR RK M+ + + + V TE
Sbjct: 950 EIGESLDGTLKSRKRRKMSKKLPPVIIKYIIINRFRGRKNMLVKLGKIDSKEKQVILTE- 1008
Query: 181 REKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKK 360
EK+ K+ P + F +T + + T + + + KH+ A K
Sbjct: 1009 -EKMELYKKLAP----LKDFWPKVPDSPATKYPIYPLTPKKSHRRKSKHKSA-------K 1056
Query: 361 RPTRKQRKERKNRMKKVRGTKKSK 432
+ T KQ++ +K+ +K +
Sbjct: 1057 KKTGKQQRTNNENIKRTLSFRKKR 1080
>AF058701-1|AAC24357.1| 3130|Homo sapiens DNA polymerase zeta
catalytic subunit protein.
Length = 3130
Score = 29.1 bits (62), Expect = 6.9
Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 2/144 (1%)
Frame = +1
Query: 7 EVGDTCVFTPKSRK*SKMSEGTATIRTRKFMTNRLLARKQMVCDV--LHPGKPTVSKTEI 180
E+G++ T KSRK KMS+ + + + NR RK M+ + + + V TE
Sbjct: 950 EIGESLDGTLKSRKRRKMSKKLPPVIIKYIIINRFRGRKNMLVKLGKIDSKEKQVILTE- 1008
Query: 181 REKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKK 360
EK+ K+ P + F +T + + T + + + KH+ A K
Sbjct: 1009 -EKMELYKKLAP----LKDFWPKVPDSPATKYPIYPLTPKKSHRRKSKHKSA-------K 1056
Query: 361 RPTRKQRKERKNRMKKVRGTKKSK 432
+ T KQ++ +K+ +K +
Sbjct: 1057 KKTGKQQRTNNENIKRTLSFRKKR 1080
>AF035537-1|AAB88486.1| 3052|Homo sapiens DNA polymerase zeta protein.
Length = 3052
Score = 29.1 bits (62), Expect = 6.9
Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 2/144 (1%)
Frame = +1
Query: 7 EVGDTCVFTPKSRK*SKMSEGTATIRTRKFMTNRLLARKQMVCDV--LHPGKPTVSKTEI 180
E+G++ T KSRK KMS+ + + + NR RK M+ + + + V TE
Sbjct: 872 EIGESLDGTLKSRKRRKMSKKLPPVIIKYIIINRFRGRKNMLVKLGKIDSKEKQVILTE- 930
Query: 181 REKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKK 360
EK+ K+ P + F +T + + T + + + KH+ A K
Sbjct: 931 -EKMELYKKLAP----LKDFWPKVPDSPATKYPIYPLTPKKSHRRKSKHKSA-------K 978
Query: 361 RPTRKQRKERKNRMKKVRGTKKSK 432
+ T KQ++ +K+ +K +
Sbjct: 979 KKTGKQQRTNNENIKRTLSFRKKR 1002
>AF521883-1|AAO14944.1| 2617|Homo sapiens multiple ankyrin repeats
single KH domain protein isoform 2 protein.
Length = 2617
Score = 28.7 bits (61), Expect = 9.1
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +1
Query: 277 ALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 432
+++ LDL K E + A EK++ RK++KE + R ++ K K
Sbjct: 1429 SILLKELDLEKSREESRKQALAAKREKRKEKRKKKKEEQKRKQEEDEENKPK 1480
>AF521882-1|AAO14943.1| 2542|Homo sapiens multiple ankyrin repeats
single KH domain protein isoform 1 protein.
Length = 2542
Score = 28.7 bits (61), Expect = 9.1
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +1
Query: 277 ALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 432
+++ LDL K E + A EK++ RK++KE + R ++ K K
Sbjct: 1429 SILLKELDLEKSREESRKQALAAKREKRKEKRKKKKEEQKRKQEEDEENKPK 1480
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,211,782
Number of Sequences: 237096
Number of extensions: 1178742
Number of successful extensions: 3360
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 3160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3353
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3487985734
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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