Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_F02
(446 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D14530-1|BAA03400.1| 143|Homo sapiens yeast ribosomal protein S... 263 2e-70
CR456996-1|CAG33277.1| 143|Homo sapiens RPS23 protein. 263 2e-70
BC070221-1|AAH70221.1| 143|Homo sapiens ribosomal protein S23 p... 263 2e-70
AB007158-1|BAA25822.1| 59|Homo sapiens ribosomal protein S23 p... 117 2e-26
Y11681-2|CAA72377.1| 138|Homo sapiens mitochondrial ribosomal p... 54 2e-07
CR407609-1|CAG28537.1| 138|Homo sapiens MRPS12 protein. 54 2e-07
BC007499-1|AAH07499.1| 138|Homo sapiens mitochondrial ribosomal... 54 2e-07
BC006424-1|AAH06424.1| 138|Homo sapiens mitochondrial ribosomal... 54 2e-07
BC001617-1|AAH01617.1| 138|Homo sapiens mitochondrial ribosomal... 54 2e-07
AF058761-1|AAC64704.1| 138|Homo sapiens ribosomal protein S12 p... 54 2e-07
X72012-1|CAA50891.1| 625|Homo sapiens endoglin protein. 30 4.1
DQ866809-1|ABI75346.1| 625|Homo sapiens endoglin (Osler-Rendu-W... 30 4.1
AL162586-6|CAI39765.1| 625|Homo sapiens endoglin (Osler-Rendu-W... 30 4.1
AL157935-2|CAI12605.1| 625|Homo sapiens endoglin (Osler-Rendu-W... 30 4.1
AY186778-1|AAO27434.1| 727|Homo sapiens polymerase protein. 29 9.5
>D14530-1|BAA03400.1| 143|Homo sapiens yeast ribosomal protein S28
homologue protein.
Length = 143
Score = 263 bits (645), Expect = 2e-70
Identities = 124/141 (87%), Positives = 132/141 (93%)
Frame = +1
Query: 22 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAK 201
MGK RG+RTARK +HRR+Q+W DK++KKAH+GT KANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAK 60
Query: 202 QPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRF 381
QPNSAIRKCVRVQLIKNGKK+TAFVP DGCLN IEENDEVLVAGFGRKGHAVGDIPGVRF
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRF 120
Query: 382 KVVKVANVSLLALYKEKKERP 444
KVVKVANVSLLALYK KKERP
Sbjct: 121 KVVKVANVSLLALYKGKKERP 141
>CR456996-1|CAG33277.1| 143|Homo sapiens RPS23 protein.
Length = 143
Score = 263 bits (645), Expect = 2e-70
Identities = 124/141 (87%), Positives = 132/141 (93%)
Frame = +1
Query: 22 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAK 201
MGK RG+RTARK +HRR+Q+W DK++KKAH+GT KANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAK 60
Query: 202 QPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRF 381
QPNSAIRKCVRVQLIKNGKK+TAFVP DGCLN IEENDEVLVAGFGRKGHAVGDIPGVRF
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRF 120
Query: 382 KVVKVANVSLLALYKEKKERP 444
KVVKVANVSLLALYK KKERP
Sbjct: 121 KVVKVANVSLLALYKGKKERP 141
>BC070221-1|AAH70221.1| 143|Homo sapiens ribosomal protein S23
protein.
Length = 143
Score = 263 bits (645), Expect = 2e-70
Identities = 124/141 (87%), Positives = 132/141 (93%)
Frame = +1
Query: 22 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAK 201
MGK RG+RTARK +HRR+Q+W DK++KKAH+GT KANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAK 60
Query: 202 QPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRF 381
QPNSAIRKCVRVQLIKNGKK+TAFVP DGCLN IEENDEVLVAGFGRKGHAVGDIPGVRF
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRF 120
Query: 382 KVVKVANVSLLALYKEKKERP 444
KVVKVANVSLLALYK KKERP
Sbjct: 121 KVVKVANVSLLALYKGKKERP 141
>AB007158-1|BAA25822.1| 59|Homo sapiens ribosomal protein S23
protein.
Length = 59
Score = 117 bits (281), Expect = 2e-26
Identities = 55/58 (94%), Positives = 55/58 (94%)
Frame = +1
Query: 271 FVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERP 444
FVP DGCLN IEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYK KKERP
Sbjct: 1 FVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKGKKERP 58
>Y11681-2|CAA72377.1| 138|Homo sapiens mitochondrial ribosomal
protein S12 precursor protein.
Length = 138
Score = 54.0 bits (124), Expect = 2e-07
Identities = 35/88 (39%), Positives = 50/88 (56%)
Frame = +1
Query: 130 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 309
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 310 NDEVLVAGFGRKGHAVGDIPGVRFKVVK 393
+ VLV G GR D+PGV+ VV+
Sbjct: 105 HQIVLVEG-GR----TQDLPGVKLTVVR 127
>CR407609-1|CAG28537.1| 138|Homo sapiens MRPS12 protein.
Length = 138
Score = 54.0 bits (124), Expect = 2e-07
Identities = 35/88 (39%), Positives = 50/88 (56%)
Frame = +1
Query: 130 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 309
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 310 NDEVLVAGFGRKGHAVGDIPGVRFKVVK 393
+ VLV G GR D+PGV+ VV+
Sbjct: 105 HQIVLVEG-GR----TQDLPGVKLTVVR 127
>BC007499-1|AAH07499.1| 138|Homo sapiens mitochondrial ribosomal
protein S12 protein.
Length = 138
Score = 54.0 bits (124), Expect = 2e-07
Identities = 35/88 (39%), Positives = 50/88 (56%)
Frame = +1
Query: 130 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 309
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 310 NDEVLVAGFGRKGHAVGDIPGVRFKVVK 393
+ VLV G GR D+PGV+ VV+
Sbjct: 105 HQIVLVEG-GR----TQDLPGVKLTVVR 127
>BC006424-1|AAH06424.1| 138|Homo sapiens mitochondrial ribosomal
protein S12 protein.
Length = 138
Score = 54.0 bits (124), Expect = 2e-07
Identities = 35/88 (39%), Positives = 50/88 (56%)
Frame = +1
Query: 130 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 309
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 310 NDEVLVAGFGRKGHAVGDIPGVRFKVVK 393
+ VLV G GR D+PGV+ VV+
Sbjct: 105 HQIVLVEG-GR----TQDLPGVKLTVVR 127
>BC001617-1|AAH01617.1| 138|Homo sapiens mitochondrial ribosomal
protein S12 protein.
Length = 138
Score = 54.0 bits (124), Expect = 2e-07
Identities = 35/88 (39%), Positives = 50/88 (56%)
Frame = +1
Query: 130 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 309
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 310 NDEVLVAGFGRKGHAVGDIPGVRFKVVK 393
+ VLV G GR D+PGV+ VV+
Sbjct: 105 HQIVLVEG-GR----TQDLPGVKLTVVR 127
>AF058761-1|AAC64704.1| 138|Homo sapiens ribosomal protein S12
protein.
Length = 138
Score = 54.0 bits (124), Expect = 2e-07
Identities = 35/88 (39%), Positives = 50/88 (56%)
Frame = +1
Query: 130 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 309
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 310 NDEVLVAGFGRKGHAVGDIPGVRFKVVK 393
+ VLV G GR D+PGV+ VV+
Sbjct: 105 HQIVLVEG-GR----TQDLPGVKLTVVR 127
>X72012-1|CAA50891.1| 625|Homo sapiens endoglin protein.
Length = 625
Score = 29.9 bits (64), Expect = 4.1
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -3
Query: 153 CTTEGVRLPSRTHVGFFEFLVGPSLLATMIHVLARRANTPR 31
CT++G+ LP+ + F FL+G L A + ++ + PR
Sbjct: 582 CTSKGLVLPAVLGITFGAFLIGALLTAALWYIYSHTREYPR 622
>DQ866809-1|ABI75346.1| 625|Homo sapiens endoglin
(Osler-Rendu-Weber syndrome 1) protein.
Length = 625
Score = 29.9 bits (64), Expect = 4.1
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -3
Query: 153 CTTEGVRLPSRTHVGFFEFLVGPSLLATMIHVLARRANTPR 31
CT++G+ LP+ + F FL+G L A + ++ + PR
Sbjct: 582 CTSKGLVLPAVLGITFGAFLIGALLTAALWYIYSHTREYPR 622
>AL162586-6|CAI39765.1| 625|Homo sapiens endoglin
(Osler-Rendu-Weber syndrome 1) protein.
Length = 625
Score = 29.9 bits (64), Expect = 4.1
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -3
Query: 153 CTTEGVRLPSRTHVGFFEFLVGPSLLATMIHVLARRANTPR 31
CT++G+ LP+ + F FL+G L A + ++ + PR
Sbjct: 582 CTSKGLVLPAVLGITFGAFLIGALLTAALWYIYSHTREYPR 622
>AL157935-2|CAI12605.1| 625|Homo sapiens endoglin
(Osler-Rendu-Weber syndrome 1) protein.
Length = 625
Score = 29.9 bits (64), Expect = 4.1
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -3
Query: 153 CTTEGVRLPSRTHVGFFEFLVGPSLLATMIHVLARRANTPR 31
CT++G+ LP+ + F FL+G L A + ++ + PR
Sbjct: 582 CTSKGLVLPAVLGITFGAFLIGALLTAALWYIYSHTREYPR 622
>AY186778-1|AAO27434.1| 727|Homo sapiens polymerase protein.
Length = 727
Score = 28.7 bits (61), Expect = 9.5
Identities = 26/105 (24%), Positives = 38/105 (36%), Gaps = 1/105 (0%)
Frame = +1
Query: 31 PRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLE-KVGVEAKQP 207
P I R H N A++E KA +H L+ K V KQ
Sbjct: 421 PFYITHIRAHTNLPGPLTKANEEADLLVSSALIKAQELHALTHVNAAGLKNKFDVTWKQA 480
Query: 208 NSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 342
++ C + Q++ + PR C N + + D V FGR
Sbjct: 481 KDIVQHCTQCQVLHLPTQEAGVNPRGLCPNALWQMDVTHVPSFGR 525
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,522,191
Number of Sequences: 237096
Number of extensions: 1652065
Number of successful extensions: 4162
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4137
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3644351872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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