Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_F01
(235 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68227-4|CAA92518.1| 480|Caenorhabditis elegans Hypothetical pr... 27 1.3
Z68227-3|CAA92519.1| 507|Caenorhabditis elegans Hypothetical pr... 27 1.3
U28941-4|AAM98024.1| 484|Caenorhabditis elegans Temporarily ass... 25 7.2
U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily ass... 25 7.2
U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily ass... 25 7.2
U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily ass... 25 7.2
U27312-6|AAA68250.1| 512|Caenorhabditis elegans Hypothetical pr... 25 7.2
AL023816-2|CAA19431.1| 355|Caenorhabditis elegans Hypothetical ... 25 7.2
Z92806-1|CAB07258.1| 802|Caenorhabditis elegans Hypothetical pr... 25 9.5
AC024881-9|AAK71410.1| 588|Caenorhabditis elegans Hypothetical ... 25 9.5
>Z68227-4|CAA92518.1| 480|Caenorhabditis elegans Hypothetical
protein F49C12.5b protein.
Length = 480
Score = 27.5 bits (58), Expect = 1.3
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +1
Query: 127 NTNLYKHHYGGMTSELDC-AHKATDNFCRPAVPCTR 231
N YK+HY G SE+ C + + P + C R
Sbjct: 412 NDRYYKYHYSGRISEITCPGPQLCEYHQHPNITCMR 447
>Z68227-3|CAA92519.1| 507|Caenorhabditis elegans Hypothetical
protein F49C12.5a protein.
Length = 507
Score = 27.5 bits (58), Expect = 1.3
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +1
Query: 127 NTNLYKHHYGGMTSELDC-AHKATDNFCRPAVPCTR 231
N YK+HY G SE+ C + + P + C R
Sbjct: 439 NDRYYKYHYSGRISEITCPGPQLCEYHQHPNITCMR 474
>U28941-4|AAM98024.1| 484|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform c protein.
Length = 484
Score = 25.0 bits (52), Expect = 7.2
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 136 LYKHHYGGMTSELDCAHKATDNF 204
L H GG +++LD + KA D+F
Sbjct: 386 LLDHEVGGDSTDLDSSQKAYDHF 408
>U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform d protein.
Length = 799
Score = 25.0 bits (52), Expect = 7.2
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 136 LYKHHYGGMTSELDCAHKATDNF 204
L H GG +++LD + KA D+F
Sbjct: 386 LLDHEVGGDSTDLDSSQKAYDHF 408
>U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform a protein.
Length = 1091
Score = 25.0 bits (52), Expect = 7.2
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 136 LYKHHYGGMTSELDCAHKATDNF 204
L H GG +++LD + KA D+F
Sbjct: 386 LLDHEVGGDSTDLDSSQKAYDHF 408
>U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform b protein.
Length = 1107
Score = 25.0 bits (52), Expect = 7.2
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 136 LYKHHYGGMTSELDCAHKATDNF 204
L H GG +++LD + KA D+F
Sbjct: 386 LLDHEVGGDSTDLDSSQKAYDHF 408
>U27312-6|AAA68250.1| 512|Caenorhabditis elegans Hypothetical
protein F26A1.3 protein.
Length = 512
Score = 25.0 bits (52), Expect = 7.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 137 YTNIIMEA*RPNLTVPTKQLTT 202
+T I+++ RP+L P QLTT
Sbjct: 92 FTRRILQSERPDLVAPDSQLTT 113
>AL023816-2|CAA19431.1| 355|Caenorhabditis elegans Hypothetical
protein T05G11.3 protein.
Length = 355
Score = 25.0 bits (52), Expect = 7.2
Identities = 12/56 (21%), Positives = 25/56 (44%)
Frame = +1
Query: 46 VSSFVATVRL*KFLHIKCSIYLSVISKNTNLYKHHYGGMTSELDCAHKATDNFCRP 213
++ F+ + + + + C ++ + +K LY+ H+G A NFC P
Sbjct: 33 INIFLIGIAISDLIRMNCKMFHTA-TKFYQLYQSHWGSCVPRSSYLLMAIINFCSP 87
>Z92806-1|CAB07258.1| 802|Caenorhabditis elegans Hypothetical
protein K10G4.1 protein.
Length = 802
Score = 24.6 bits (51), Expect = 9.5
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 5/34 (14%)
Frame = -3
Query: 101 LHFICKNF-----YNLTVATKLLTTSSDVLCMRF 15
LHFIC+NF Y+L + LL T + V C ++
Sbjct: 724 LHFICENFELENLYDL-IGRPLLETENAVKCRKW 756
>AC024881-9|AAK71410.1| 588|Caenorhabditis elegans Hypothetical
protein Y97E10B.1 protein.
Length = 588
Score = 24.6 bits (51), Expect = 9.5
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +1
Query: 127 NTNLYKHHYGGMTSELDCAHKATDNFCR-PAVPC 225
N Y++HY G E+ C +F + P + C
Sbjct: 520 NDRYYRYHYSGRIGEIKCPGPQLCSFQQHPKIKC 553
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,549,905
Number of Sequences: 27780
Number of extensions: 95164
Number of successful extensions: 233
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 233
length of database: 12,740,198
effective HSP length: 57
effective length of database: 11,156,738
effective search space used: 223134760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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