Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_E22
         (346 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071628-1|AAL49250.1|  733|Drosophila melanogaster RE67590p pro...   122   1e-28
AE014297-1202|AAF54557.1|  733|Drosophila melanogaster CG4082-PA...   122   1e-28
U83493-1|AAC47652.1|  732|Drosophila melanogaster MCM5 homolog p...   113   4e-26
AY071086-1|AAL48708.1|  454|Drosophila melanogaster RE15313p pro...    27   5.0  
AE014297-406|AAF51916.2|  454|Drosophila melanogaster CG31559-PA...    27   5.0  

>AY071628-1|AAL49250.1|  733|Drosophila melanogaster RE67590p
           protein.
          Length = 733

 Score =  122 bits (295), Expect = 1e-28
 Identities = 59/113 (52%), Positives = 79/113 (69%)
 Frame = +3

Query: 6   RQFHSGNFNYKYRDALKRNYNLNQYWVEINIEDLSSFDEILAEKLYKKPTEHLPIXXXXX 185
           R F+  NF YKYRD LKRNY   +Y++EI +EDL  FDE LA+KL K+PTEHL I     
Sbjct: 39  RTFNEENFFYKYRDTLKRNYLNGRYFLEIEMEDLVGFDETLADKLNKQPTEHLEIFEEAA 98

Query: 186 XXXXXXXXXPRPEGEEKVEDIQVILSSDAHSSSLRELKSETVSRLVKIPGIVI 344
                    PRPE EE + DIQ++LSS+A+ +++R+LKS+ VS+LVKI GI++
Sbjct: 99  REVADEITAPRPEHEEHMHDIQILLSSNANPTNIRQLKSDCVSKLVKIAGIIV 151


>AE014297-1202|AAF54557.1|  733|Drosophila melanogaster CG4082-PA
           protein.
          Length = 733

 Score =  122 bits (295), Expect = 1e-28
 Identities = 59/113 (52%), Positives = 79/113 (69%)
 Frame = +3

Query: 6   RQFHSGNFNYKYRDALKRNYNLNQYWVEINIEDLSSFDEILAEKLYKKPTEHLPIXXXXX 185
           R F+  NF YKYRD LKRNY   +Y++EI +EDL  FDE LA+KL K+PTEHL I     
Sbjct: 39  RTFNEENFFYKYRDTLKRNYLNGRYFLEIEMEDLVGFDETLADKLNKQPTEHLEIFEEAA 98

Query: 186 XXXXXXXXXPRPEGEEKVEDIQVILSSDAHSSSLRELKSETVSRLVKIPGIVI 344
                    PRPE EE + DIQ++LSS+A+ +++R+LKS+ VS+LVKI GI++
Sbjct: 99  REVADEITAPRPEHEEHMHDIQILLSSNANPTNIRQLKSDCVSKLVKIAGIIV 151


>U83493-1|AAC47652.1|  732|Drosophila melanogaster MCM5 homolog
           protein.
          Length = 732

 Score =  113 bits (273), Expect = 4e-26
 Identities = 57/113 (50%), Positives = 77/113 (68%)
 Frame = +3

Query: 6   RQFHSGNFNYKYRDALKRNYNLNQYWVEINIEDLSSFDEILAEKLYKKPTEHLPIXXXXX 185
           R F+  NF YKYRD LKRNY   +Y++EI +EDL  FDE LA+   K+PTEHL I     
Sbjct: 39  RTFNEENFFYKYRDTLKRNYLNGRYFLEIEMEDLVGFDETLADT-DKQPTEHLEIFEEAA 97

Query: 186 XXXXXXXXXPRPEGEEKVEDIQVILSSDAHSSSLRELKSETVSRLVKIPGIVI 344
                    PRPE EE + DIQ++LSS+A+ +++R+LKS+ VS+LVKI GI++
Sbjct: 98  REVADEITAPRPEHEEHMHDIQILLSSNANPTNIRQLKSDCVSKLVKIAGIIV 150


>AY071086-1|AAL48708.1|  454|Drosophila melanogaster RE15313p
           protein.
          Length = 454

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +3

Query: 15  HSGNFNYKYRDALKRNYNLNQY 80
           H GN NYKY D    ++++N++
Sbjct: 190 HRGNINYKYADDQYYSFHINEH 211


>AE014297-406|AAF51916.2|  454|Drosophila melanogaster CG31559-PA
           protein.
          Length = 454

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +3

Query: 15  HSGNFNYKYRDALKRNYNLNQY 80
           H GN NYKY D    ++++N++
Sbjct: 190 HRGNINYKYADDQYYSFHINEH 211


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,149,820
Number of Sequences: 53049
Number of extensions: 205305
Number of successful extensions: 573
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 572
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 819378027
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)