Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_E11
         (136 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          19   5.4  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      19   5.4  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    19   7.2  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    18   9.5  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 111 FYHELLRKF*QLLSVRQARIS 49
           F H+  + F  LL VRQA +S
Sbjct: 32  FLHKQKKIFDLLLYVRQADLS 52


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 111 FYHELLRKF*QLLSVRQARIS 49
           F H+  + F  LL VRQA +S
Sbjct: 32  FLHKQKKIFDLLLYVRQADLS 52


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 81  ARTFEEARGKIKK 119
           A TF++A GK+ K
Sbjct: 440 AVTFKDAAGKVTK 452


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
          protein precursor protein.
          Length = 153

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = +2

Query: 56 RAWRTERSC 82
          + W+ ERSC
Sbjct: 67 KIWQMERSC 75


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,383
Number of Sequences: 438
Number of extensions: 277
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 25
effective length of database: 135,393
effective search space used:  2572467
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)