Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_E08
(325 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0064 - 20385290-20385346,20385452-20387133,20387266-203880... 31 0.16
05_07_0357 - 29533496-29533556,29533638-29533770,29533857-295339... 29 0.84
12_01_0477 + 3742751-3745200,3747192-3747502,3747886-3748232 29 1.1
11_04_0110 - 13539059-13539751,13539857-13540383,13541925-135424... 29 1.1
07_03_0072 - 13051145-13052362 29 1.1
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 29 1.1
02_01_0511 - 3706123-3706166,3706436-3706492,3706734-3706818,370... 28 1.9
10_01_0163 - 1850018-1850033,1850184-1850271,1850824-1854544 27 2.6
03_01_0057 + 476172-476283,476337-476449,476532-476634,477089-47... 27 2.6
05_05_0230 - 23476919-23477372,23477656-23477695,23478578-234787... 27 3.4
10_08_0653 + 19606476-19606752,19607210-19608436,19614698-19614942 27 4.5
07_01_1167 + 11030200-11031165,11031273-11031407,11031509-11031874 27 4.5
06_02_0133 + 12176059-12176238,12177244-12177362,12177515-121776... 27 4.5
02_05_1326 - 35712102-35712473,35712608-35712720,35712944-357148... 27 4.5
10_08_0908 - 21476700-21476945,21477638-21477935,21478078-214783... 26 5.9
09_06_0040 - 20432008-20432091,20432152-20432229,20432322-204329... 26 5.9
09_04_0501 + 18153252-18153453,18153973-18154224,18154809-181550... 26 5.9
06_03_1136 - 27897822-27898235,27898344-27898488,27899127-278992... 26 5.9
04_04_1482 - 33903276-33903374,33903475-33903600,33904110-339043... 26 5.9
09_01_0069 - 1010888-1011226,1011412-1011600 26 7.8
08_01_0162 - 1302497-1302787,1304608-1305271,1305380-1306927,130... 26 7.8
>03_05_0064 -
20385290-20385346,20385452-20387133,20387266-20388083,
20388184-20388303,20389036-20389305,20390094-20390269
Length = 1040
Score = 31.5 bits (68), Expect = 0.16
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +3
Query: 108 DELEQSDSGMESLSASKDDTPERKPEDSFITPSLGSSPSAEIALSGPLKEYDDEPDETLS 287
D+ S SG S+S+ DD EDS + SS A+ G + +EP ++LS
Sbjct: 549 DDENSSTSGSASVSSESDDESNSPSEDSKQCRGVMSSSEAQKCSKGRTERESEEPFKSLS 608
>05_07_0357 -
29533496-29533556,29533638-29533770,29533857-29533953,
29534073-29534141,29534221-29534378,29534483-29534527,
29534598-29534625
Length = 196
Score = 29.1 bits (62), Expect = 0.84
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +3
Query: 99 DLTDELEQSDSGMESLSASKDDTPERKPEDSFITPSLGSSPSAEIALSGP 248
DL+ E + DS + +S+DD E ED+ P G AEI L P
Sbjct: 69 DLSPEDDDDDSSEDD--SSEDDEDESDEEDTPKKPETGKRKVAEIVLKTP 116
>12_01_0477 + 3742751-3745200,3747192-3747502,3747886-3748232
Length = 1035
Score = 28.7 bits (61), Expect = 1.1
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -3
Query: 116 KFVSQIHRHFKRYTAILTNSPVLPK 42
+F Q+H+ F +YT +L SP + K
Sbjct: 776 EFTKQVHQAFLKYTKLLNESPTVQK 800
>11_04_0110 -
13539059-13539751,13539857-13540383,13541925-13542437,
13542606-13542786
Length = 637
Score = 28.7 bits (61), Expect = 1.1
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3
Query: 99 DLTDELEQSDSGMESLSASKDDTP 170
DL DEL + DSG+ S ++S DTP
Sbjct: 90 DLIDELCRRDSGLLSAASSSGDTP 113
>07_03_0072 - 13051145-13052362
Length = 405
Score = 28.7 bits (61), Expect = 1.1
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +3
Query: 78 VSLKMPMDLTDELEQSD---SGMESLSASKDDTPERKPEDSFITPSL 209
V +P L L+QS+ + E L A+ DDTP R +F+TP+L
Sbjct: 150 VRWSLPPSLLAALQQSEPLETTREKLRAT-DDTPSRAAVPTFVTPTL 195
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 28.7 bits (61), Expect = 1.1
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 111 ELEQSDSGMESLSASKDDTPERKPEDSFITPS-LGSSPSAEIALSGPLKEYDDEPDET 281
EL SD+ AS +P R P S +PS S P+A + + G + D +P ++
Sbjct: 16 ELADSDADDSDADASPSPSPSRSPSPSARSPSGSPSRPAALMDVDGGDDDDDADPSQS 73
>02_01_0511 -
3706123-3706166,3706436-3706492,3706734-3706818,
3707424-3707472,3707566-3707639,3707775-3707849,
3708186-3708240,3708318-3708391,3708607-3708753,
3709419-3709493,3709527-3709648,3709749-3709929
Length = 345
Score = 27.9 bits (59), Expect = 1.9
Identities = 18/66 (27%), Positives = 30/66 (45%)
Frame = +3
Query: 69 YCCVSLKMPMDLTDELEQSDSGMESLSASKDDTPERKPEDSFITPSLGSSPSAEIALSGP 248
+CC++L + L+ S S S D R+PE + + G + AE+A+S
Sbjct: 9 FCCLALLLSFFLSFFPASSSPSRSSPLLSAADLLLREPELLLLPRAAGKNQQAELAVSVK 68
Query: 249 LKEYDD 266
K+ D
Sbjct: 69 KKKIGD 74
>10_01_0163 - 1850018-1850033,1850184-1850271,1850824-1854544
Length = 1274
Score = 27.5 bits (58), Expect = 2.6
Identities = 13/55 (23%), Positives = 29/55 (52%)
Frame = -2
Query: 276 HLVHRHILLEGR*EQFPRWVMNRAMGL*NYPQAYVQECHLCLRSKTPYHYRFVQV 112
H +H ++ + FP W+ + ++ L N + +++ C +C H++F+QV
Sbjct: 757 HGLHMLKVVSYKGTNFPTWMTDLSV-LENLTELHLEGCTMCEEFPQFIHFKFLQV 810
>03_01_0057 +
476172-476283,476337-476449,476532-476634,477089-477210,
477303-477497,477627-477701,478082-478179,478328-478421
Length = 303
Score = 27.5 bits (58), Expect = 2.6
Identities = 17/66 (25%), Positives = 35/66 (53%)
Frame = +3
Query: 99 DLTDELEQSDSGMESLSASKDDTPERKPEDSFITPSLGSSPSAEIALSGPLKEYDDEPDE 278
++ +E+++ S + +AS+ RK ++ PS S P+ A++ + + DD+ E
Sbjct: 174 EIEEEVDKVLSAIAGETASELPDAVRKEKEKMKQPST-SEPAERTAIAEAVDDDDDDELE 232
Query: 279 TLSERL 296
+ ERL
Sbjct: 233 QIRERL 238
>05_05_0230 -
23476919-23477372,23477656-23477695,23478578-23478700,
23479114-23479151,23479289-23479674,23479875-23481053,
23481805-23481928,23482733-23482779
Length = 796
Score = 27.1 bits (57), Expect = 3.4
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 141 SLSASKDDTPERKPEDSFITPSLGSSPS 224
S S+S+ TP R+P P++G SPS
Sbjct: 253 SRSSSRSSTPTRQPAMRSSAPAVGRSPS 280
>10_08_0653 + 19606476-19606752,19607210-19608436,19614698-19614942
Length = 582
Score = 26.6 bits (56), Expect = 4.5
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 210 GSSPSAEIALSGPLKEYDDEPDETLSERLWGLTEMFPE 323
GS E+A PLK+ D + L E+L G+ + E
Sbjct: 82 GSEGGGEVARGAPLKQAMDSMESKLLEKLEGIIKWMHE 119
>07_01_1167 + 11030200-11031165,11031273-11031407,11031509-11031874
Length = 488
Score = 26.6 bits (56), Expect = 4.5
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 158 FACAQRLHTTIALFKFVSQIH 96
F C Q+LH T+A FV IH
Sbjct: 358 FPCVQKLHITLAEGLFVPDIH 378
>06_02_0133 +
12176059-12176238,12177244-12177362,12177515-12177612,
12177811-12177870,12177920-12177990,12178082-12178276,
12178395-12178441,12178532-12178598,12178660-12178665,
12178689-12178789,12179014-12179115,12179182-12179323,
12179578-12179661,12179760-12180080
Length = 530
Score = 26.6 bits (56), Expect = 4.5
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +1
Query: 34 ILSFGKTGEFVNIAVYLLKCLWI 102
I+SFG G F+++A+ C W+
Sbjct: 115 IMSFGIFGVFISVAIVSTGCYWL 137
>02_05_1326 - 35712102-35712473,35712608-35712720,35712944-35714857,
35714942-35715135,35715237-35716786,35716946-35717049,
35717258-35717399,35717692-35717910
Length = 1535
Score = 26.6 bits (56), Expect = 4.5
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +3
Query: 114 LEQSDSGMESLSASKDDTPERKPEDSFITPSLGSSPSAEI 233
L+ +E L +++P P+ + ITPSL +PS ++
Sbjct: 1397 LDDVKEDLEDLDEDHENSPIDPPKVAGITPSLAPTPSLKL 1436
>10_08_0908 -
21476700-21476945,21477638-21477935,21478078-21478325,
21479319-21479573
Length = 348
Score = 26.2 bits (55), Expect = 5.9
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +1
Query: 97 WI*LTNLNKAIVVWSL*AQAKMTLLNVSLRIVS*PHRSVHHPARKLLSAAL 249
W + LN A++V L N R V HR+V HP+R+ +SAAL
Sbjct: 248 WFSVNALNGALIVNI--GDTLEILSNGKFRSVE--HRAVVHPSRERISAAL 294
>09_06_0040 -
20432008-20432091,20432152-20432229,20432322-20432941,
20433042-20433108,20433276-20433291,20433781-20433887,
20433989-20434037,20435059-20435142,20435288-20435384,
20435914-20435985,20436075-20436435,20437864-20438259
Length = 676
Score = 26.2 bits (55), Expect = 5.9
Identities = 11/43 (25%), Positives = 20/43 (46%)
Frame = +3
Query: 60 IC*YCCVSLKMPMDLTDELEQSDSGMESLSASKDDTPERKPED 188
+C C+ P+ + DE + + E + +K DTP P +
Sbjct: 461 LCPESCIEQDEPIIMCDEKVEQEKCEEEKAEAKQDTPVTAPSE 503
>09_04_0501 +
18153252-18153453,18153973-18154224,18154809-18155015,
18155198-18157046,18157334-18157381,18158222-18158291,
18158380-18158475,18158583-18158621,18158714-18158924,
18159037-18159178,18159275-18159407,18159762-18159878
Length = 1121
Score = 26.2 bits (55), Expect = 5.9
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -3
Query: 179 LTFRSVIFACAQRLHTTIA 123
+T RSVIFACAQ T +A
Sbjct: 553 ITLRSVIFACAQLGSTELA 571
>06_03_1136 -
27897822-27898235,27898344-27898488,27899127-27899204,
27899302-27899400,27900508-27900613,27901323-27901428
Length = 315
Score = 26.2 bits (55), Expect = 5.9
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = +3
Query: 114 LEQSDSGMESLSASKDD---TPERKPEDSFITPSLGSSPSAEIALSGPLKEYDD 266
+E+ S + L+AS D TP RKP S S S +SG K DD
Sbjct: 1 MEKGKSVVAELAASLRDVEVTPRRKPASSLPAASFWCKSSILKIMSGKYKIVDD 54
>04_04_1482 -
33903276-33903374,33903475-33903600,33904110-33904351,
33904388-33904626,33904798-33904961,33905738-33906520
Length = 550
Score = 26.2 bits (55), Expect = 5.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 237 EQFPRWVMNRAMGL*NYPQAYVQE 166
++F WV++ A GL N YVQE
Sbjct: 227 QEFTSWVLSTAAGLGNCLSRYVQE 250
>09_01_0069 - 1010888-1011226,1011412-1011600
Length = 175
Score = 25.8 bits (54), Expect = 7.8
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = +3
Query: 123 SDSGMESLSASKDDTPERKPEDSFITPSLGSSPSAEIALSG-PLKEYDDEPDETLSERLW 299
S+ + SL K+D E + + +G S + G D P + ER W
Sbjct: 5 SEDAVSSLGTGKEDEKEGRVGGAIEARVVGKDSSKDGGRRGREAGAMCDRPRDR--ERFW 62
Query: 300 GLTEMFP 320
GL ++FP
Sbjct: 63 GLMKIFP 69
>08_01_0162 - 1302497-1302787,1304608-1305271,1305380-1306927,
1307360-1308768
Length = 1303
Score = 25.8 bits (54), Expect = 7.8
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Frame = +3
Query: 93 PMDLTDELEQSDSGMESLSASKDDTPERKPEDSFIT-PSLGSSPSAEIALSG---PLKEY 260
P+ DEL S +GM S SA++ T R E P+ P LSG ++
Sbjct: 1181 PVVSVDELFTSPAGMSSSSATQSSTTTRGREHGGDRWPASCRQPPRRTILSGSSSSVRSS 1240
Query: 261 DDEPDETLSERL 296
D +E E L
Sbjct: 1241 SDSAEEDTEEEL 1252
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,601,516
Number of Sequences: 37544
Number of extensions: 128955
Number of successful extensions: 417
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 417
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 423156300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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