Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_E08
         (325 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   2.1  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   2.1  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    22   2.1  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   4.9  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   4.9  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   4.9  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    21   4.9  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    20   6.5  
AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.            20   8.6  

>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 14/59 (23%), Positives = 25/59 (42%)
 Frame = +3

Query: 84  LKMPMDLTDELEQSDSGMESLSASKDDTPERKPEDSFITPSLGSSPSAEIALSGPLKEY 260
           L M + +  EL+Q +          D+  E  P+D ++          E+  SG ++EY
Sbjct: 7   LAMVVGVQAELKQINVIFRHGDRIPDEKNEMYPKDPYLYYDFYPLERGELTNSGKMREY 65


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = -3

Query: 134 TTIALFKFVSQIHRHFKRYTAILTNSPVLPKLRIKKAMHQSS 9
           TT  +    S I R+    T  +TNSP   KLR   A  + +
Sbjct: 329 TTSPMTSTKSTIVRNHLNSTCSVTNSPHQKKLRFHLAKERKA 370


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +3

Query: 123 SDSGMESLSASKDDTPERKPEDSFITPSLGSS 218
           S S  ++ SAS+++T      +SF  P+L  S
Sbjct: 611 SGSNNQTSSASRENTSNTTSMESFKPPTLTES 642


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 153 LRSKTPYHYRFVQVRQSNP 97
           LR +T  +YR ++ RQS P
Sbjct: 388 LRGETQSNYREMEKRQSVP 406


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = +3

Query: 159 DDTPERKPEDSFITPSLGSSPSAEIALSGPLKEY 260
           D+  E  P+D ++          E+  SG ++EY
Sbjct: 17  DEKNEMYPKDPYLYYDFYPLERGELTNSGKMREY 50


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 12/57 (21%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
 Frame = +3

Query: 108 DELEQSDSGMESLSASKDDTPERKPEDSFI---TPSLGSSPSAEIALSGPLKEYDDE 269
           DE ++       +  S+     ++   S +   +PS   SPS  +  S P ++++ E
Sbjct: 4   DECDRKSLSQRKIIRSRSRRYSKRFSSSIVDRRSPSSSRSPSPSLLTSQPHQDHNKE 60


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 7/29 (24%), Positives = 17/29 (58%)
 Frame = +3

Query: 108 DELEQSDSGMESLSASKDDTPERKPEDSF 194
           +EL+++   +  + + K+DTP+   +  F
Sbjct: 4   EELKKTIKNLRKVCSKKNDTPKELLDGQF 32


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +1

Query: 10  ELWCIAFLILSFGKTGEFVNIAVYLLK 90
           ++W    ++  F   GEFV + V  L+
Sbjct: 263 DVWMAGCMMFVFAALGEFVVVKVLDLR 289


>AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.
          Length = 50

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 253 KNMTMNQMKHYQKDYGV*PK 312
           KN+  NQM  +  D  + PK
Sbjct: 13  KNLNQNQMMIWALDCSIKPK 32


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,846
Number of Sequences: 438
Number of extensions: 1124
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7093251
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)