Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_E06
(492 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016452-10|AAB66019.1| 620|Caenorhabditis elegans Gastrulation... 98 3e-21
AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp (s... 36 0.012
U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical pr... 32 0.26
AF047652-4|AAC04392.2| 399|Caenorhabditis elegans Hypothetical ... 29 1.8
Z92824-4|CAB07307.2| 395|Caenorhabditis elegans B0413.2 protein. 28 3.2
Z79596-4|CAB01856.2| 554|Caenorhabditis elegans Hypothetical pr... 28 3.2
Z79596-3|CAI79132.1| 561|Caenorhabditis elegans Hypothetical pr... 28 3.2
U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical pr... 28 3.2
AF003140-5|AAD47120.1| 814|Caenorhabditis elegans Hypothetical ... 28 3.2
AF003140-4|AAD47119.1| 2712|Caenorhabditis elegans Hypothetical ... 28 3.2
AF003140-3|AAM15563.1| 2710|Caenorhabditis elegans Hypothetical ... 28 3.2
Z48241-4|CAA88284.1| 468|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z48241-3|CAC42265.1| 490|Caenorhabditis elegans Hypothetical pr... 28 4.2
U80441-5|AAB37654.1| 207|Caenorhabditis elegans Atp synthase su... 28 4.2
U80441-4|AAR25649.1| 228|Caenorhabditis elegans Atp synthase su... 28 4.2
AF241847-1|AAF71523.1| 468|Caenorhabditis elegans LAG-3B protein. 28 4.2
AF241846-1|AAF71522.1| 490|Caenorhabditis elegans LAG-3A protein. 28 4.2
AC024090-2|AAK67219.1| 658|Caenorhabditis elegans Hypothetical ... 28 4.2
Z68108-2|CAA92135.1| 406|Caenorhabditis elegans Hypothetical pr... 27 5.6
AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical ... 27 5.6
EF090260-1|ABK78773.1| 99|Caenorhabditis elegans glycoprotein ... 27 7.4
AF022982-10|AAB69939.1| 99|Caenorhabditis elegans Hypothetical... 27 7.4
AF022982-9|ABS83856.1| 125|Caenorhabditis elegans Hypothetical ... 27 7.4
Z83217-3|CAB05682.3| 610|Caenorhabditis elegans Hypothetical pr... 27 9.8
U23525-5|AAC46568.1| 465|Caenorhabditis elegans Yeast smf (diva... 27 9.8
L19247-1|AAC37166.1| 223|Caenorhabditis elegans homeobox protei... 27 9.8
L15201-6|AAP82660.1| 222|Caenorhabditis elegans Egg laying defe... 27 9.8
L15201-5|AAA27943.2| 219|Caenorhabditis elegans Egg laying defe... 27 9.8
L15201-4|AAN84878.1| 223|Caenorhabditis elegans Egg laying defe... 27 9.8
AF039044-7|AAG24125.1| 125|Caenorhabditis elegans Hypothetical ... 27 9.8
>AF016452-10|AAB66019.1| 620|Caenorhabditis elegans Gastrulation
defective protein 1 protein.
Length = 620
Score = 98.3 bits (234), Expect = 3e-21
Identities = 59/171 (34%), Positives = 91/171 (53%), Gaps = 12/171 (7%)
Frame = +1
Query: 13 FSPDDAMVFTGESLKRGEEVGKLTFFDAKTFEIVTRLEVTDSHVIKAVWHAKLNQIFIGC 192
FSP +VFTG S + G L FFD TF++V +++ + WH +LNQI G
Sbjct: 378 FSPRAEVVFTGTSSPNKDTPGTLQFFDPMTFDLVYKIDYPGISCHRIQWHPRLNQIIAGL 437
Query: 193 GNGVVKCYYDKRRSLRGAKLCVVKANRKKQSIEVVSTQQIITPHALPLFR------QEKL 354
+G + YYD+ S RG CV K ++ ++ EVV +++P +L +F+ +EK
Sbjct: 438 SDGTIHVYYDQTMSQRGVMSCVTKPLKRNRASEVVREDMVLSPLSLEMFQPRGEEGEEKE 497
Query: 355 RTS---KK--KMEKDRLDPVKSHRPDLPIT-SGQGGRVAASGSTLSSFVIR 489
T KK +M+ ++L P D+PI GRVAASG +L S++ +
Sbjct: 498 VTGWRIKKYLRMQDNKLRPEFRKPADMPINGKSANGRVAASGGSLHSYLAK 548
>AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 17 protein.
Length = 567
Score = 36.3 bits (80), Expect = 0.012
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +1
Query: 13 FSPDDAMVFTGESLKRGEEVGKLTFFDAKTFEIVTRLEVTDSHVIKAVWHAKLNQIFIGC 192
FSPD + + +G++ GKL +D +T +IV + + DS I A+WH I
Sbjct: 504 FSPDQSFLISGDA------DGKLFIWDWRTHKIVGKWKAHDSTCIAALWHPHEKSRMITA 557
Query: 193 G-NGVVKCY 216
G +G++K +
Sbjct: 558 GWDGLIKMW 566
>U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical
protein F23F12.8 protein.
Length = 980
Score = 31.9 bits (69), Expect = 0.26
Identities = 16/55 (29%), Positives = 32/55 (58%)
Frame = +1
Query: 223 KRRSLRGAKLCVVKANRKKQSIEVVSTQQIITPHALPLFRQEKLRTSKKKMEKDR 387
++ R +L V++ R ++ +E V +++ H + + RQ++ KKK+EKDR
Sbjct: 451 QQEEARQEQLRVLEEERARE-LERVRQEELERQHQMEILRQQEEDQKKKKLEKDR 504
>AF047652-4|AAC04392.2| 399|Caenorhabditis elegans Hypothetical
protein C34H4.3 protein.
Length = 399
Score = 29.1 bits (62), Expect = 1.8
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -2
Query: 491 FLITKEL-SVLPEAATRPPCPEVIGRSGRCDLTGSSRSFSIFFLLVRSFSCL 339
F+ T +L V AT PP P+ S+ + S F LLV SF CL
Sbjct: 346 FVFTGDLLPVTSSVATNPPNPQTTPPVITTTKLASNLNLSSFILLVSSFLCL 397
>Z92824-4|CAB07307.2| 395|Caenorhabditis elegans B0413.2 protein.
Length = 395
Score = 28.3 bits (60), Expect = 3.2
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 428 VIGRSGRCDLTGSSRSFSIFFLLVRSFSCLNSGSACGVMI 309
V+ G C +TG SR F I + +V F L + +CG+ +
Sbjct: 237 VVAMXGCCGITGRSRPFLIIYSMV-VFLLLVATLSCGIYL 275
>Z79596-4|CAB01856.2| 554|Caenorhabditis elegans Hypothetical
protein C02C6.2b protein.
Length = 554
Score = 28.3 bits (60), Expect = 3.2
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = -1
Query: 123 QSRHDFERFRIEESQFSDFLTPFQRFPREHHRVVRTE 13
+S+ +FE+F ++S S F+ P P++H V +
Sbjct: 357 RSKQNFEKFFPDDSGASSFIVPSSFLPKQHETKVNID 393
>Z79596-3|CAI79132.1| 561|Caenorhabditis elegans Hypothetical
protein C02C6.2a protein.
Length = 561
Score = 28.3 bits (60), Expect = 3.2
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = -1
Query: 123 QSRHDFERFRIEESQFSDFLTPFQRFPREHHRVVRTE 13
+S+ +FE+F ++S S F+ P P++H V +
Sbjct: 364 RSKQNFEKFFPDDSGASSFIVPSSFLPKQHETKVNID 400
>U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical
protein F55F8.3 protein.
Length = 910
Score = 28.3 bits (60), Expect = 3.2
Identities = 11/43 (25%), Positives = 21/43 (48%)
Frame = +1
Query: 73 GKLTFFDAKTFEIVTRLEVTDSHVIKAVWHAKLNQIFIGCGNG 201
G + + +F +V L V++ + W+ + + IGCG G
Sbjct: 295 GVIVLHEIPSFALVHNLRVSEMRIQTVAWNLTGDWLAIGCGKG 337
>AF003140-5|AAD47120.1| 814|Caenorhabditis elegans Hypothetical
protein C44E4.1b protein.
Length = 814
Score = 28.3 bits (60), Expect = 3.2
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +1
Query: 7 GAFSPDDAMVFTGESLKRGEEVGKLTFFDAKTFEIVTRLEVTDSHVI 147
G DDAM + KRG E G +T KT +I+ ++ ++ +++
Sbjct: 245 GGIREDDAMWWFDLFEKRGNEEGSVTELHRKTAQILDQMTMSIGNIV 291
>AF003140-4|AAD47119.1| 2712|Caenorhabditis elegans Hypothetical
protein C44E4.1a protein.
Length = 2712
Score = 28.3 bits (60), Expect = 3.2
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +1
Query: 7 GAFSPDDAMVFTGESLKRGEEVGKLTFFDAKTFEIVTRLEVTDSHVI 147
G DDAM + KRG E G +T KT +I+ ++ ++ +++
Sbjct: 2143 GGIREDDAMWWFDLFEKRGNEEGSVTELHRKTAQILDQMTMSIGNIV 2189
>AF003140-3|AAM15563.1| 2710|Caenorhabditis elegans Hypothetical
protein C44E4.1c protein.
Length = 2710
Score = 28.3 bits (60), Expect = 3.2
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +1
Query: 7 GAFSPDDAMVFTGESLKRGEEVGKLTFFDAKTFEIVTRLEVTDSHVI 147
G DDAM + KRG E G +T KT +I+ ++ ++ +++
Sbjct: 2141 GGIREDDAMWWFDLFEKRGNEEGSVTELHRKTAQILDQMTMSIGNIV 2187
>Z48241-4|CAA88284.1| 468|Caenorhabditis elegans Hypothetical
protein C32A3.1b protein.
Length = 468
Score = 27.9 bits (59), Expect = 4.2
Identities = 15/64 (23%), Positives = 32/64 (50%)
Frame = +1
Query: 256 VVKANRKKQSIEVVSTQQIITPHALPLFRQEKLRTSKKKMEKDRLDPVKSHRPDLPITSG 435
+ +AN +K E+++ Q+ +T H LF + +K++E+ + + P +S
Sbjct: 54 LARANYEKARPEMIANQRAVTAH---LFNRYTEDEERKRVEQQKNKEAMNASTSAPTSSR 110
Query: 436 QGGR 447
GG+
Sbjct: 111 NGGQ 114
>Z48241-3|CAC42265.1| 490|Caenorhabditis elegans Hypothetical
protein C32A3.1a protein.
Length = 490
Score = 27.9 bits (59), Expect = 4.2
Identities = 15/64 (23%), Positives = 32/64 (50%)
Frame = +1
Query: 256 VVKANRKKQSIEVVSTQQIITPHALPLFRQEKLRTSKKKMEKDRLDPVKSHRPDLPITSG 435
+ +AN +K E+++ Q+ +T H LF + +K++E+ + + P +S
Sbjct: 76 LARANYEKARPEMIANQRAVTAH---LFNRYTEDEERKRVEQQKNKEAMNASTSAPTSSR 132
Query: 436 QGGR 447
GG+
Sbjct: 133 NGGQ 136
>U80441-5|AAB37654.1| 207|Caenorhabditis elegans Atp synthase
subunit protein 3,isoform a protein.
Length = 207
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 166 KLNQIFIGCGNGVVKCYYDKRRSLRGAKLCVVKANRKKQSIEVVSTQQIIT 318
KL+QI N V Y D ++ +KAN+KK +IE +ST+ +T
Sbjct: 47 KLDQISTDLNN-VRSVYKDNKKFQEFVLDPTLKANKKKTAIEAISTKLGLT 96
>U80441-4|AAR25649.1| 228|Caenorhabditis elegans Atp synthase
subunit protein 3,isoform b protein.
Length = 228
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 166 KLNQIFIGCGNGVVKCYYDKRRSLRGAKLCVVKANRKKQSIEVVSTQQIIT 318
KL+QI N V Y D ++ +KAN+KK +IE +ST+ +T
Sbjct: 68 KLDQISTDLNN-VRSVYKDNKKFQEFVLDPTLKANKKKTAIEAISTKLGLT 117
>AF241847-1|AAF71523.1| 468|Caenorhabditis elegans LAG-3B protein.
Length = 468
Score = 27.9 bits (59), Expect = 4.2
Identities = 15/64 (23%), Positives = 32/64 (50%)
Frame = +1
Query: 256 VVKANRKKQSIEVVSTQQIITPHALPLFRQEKLRTSKKKMEKDRLDPVKSHRPDLPITSG 435
+ +AN +K E+++ Q+ +T H LF + +K++E+ + + P +S
Sbjct: 54 LARANYEKARPEMIANQRAVTAH---LFNRYTEDEERKRVEQQKNKEAMNASTSAPTSSR 110
Query: 436 QGGR 447
GG+
Sbjct: 111 NGGQ 114
>AF241846-1|AAF71522.1| 490|Caenorhabditis elegans LAG-3A protein.
Length = 490
Score = 27.9 bits (59), Expect = 4.2
Identities = 15/64 (23%), Positives = 32/64 (50%)
Frame = +1
Query: 256 VVKANRKKQSIEVVSTQQIITPHALPLFRQEKLRTSKKKMEKDRLDPVKSHRPDLPITSG 435
+ +AN +K E+++ Q+ +T H LF + +K++E+ + + P +S
Sbjct: 76 LARANYEKARPEMIANQRAVTAH---LFNRYTEDEERKRVEQQKNKEAMNASTSAPTSSR 132
Query: 436 QGGR 447
GG+
Sbjct: 133 NGGQ 136
>AC024090-2|AAK67219.1| 658|Caenorhabditis elegans Hypothetical
protein C52E2.4 protein.
Length = 658
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = -1
Query: 210 LDDPVAATDEDLVQFRVPHCFDHMRVRHFQSRHDF 106
+DDP ++ +FR P C +++++R++Q+R F
Sbjct: 616 IDDPTTNLP-NVWRFRYPGCRENLQIRYYQNRKIF 649
>Z68108-2|CAA92135.1| 406|Caenorhabditis elegans Hypothetical
protein T05A10.3 protein.
Length = 406
Score = 27.5 bits (58), Expect = 5.6
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = -1
Query: 237 ETPSLVVVTLDDPVAATDEDLVQFRVPHCFDHMR---VRHFQSRHDFERFRIEESQ 79
E P + D+ +A++ E + + H DH V + R + ERFR+EE Q
Sbjct: 189 EEPVVEPTEGDEQMASSSEHITKDNEEHHVDHQEHHEVSDEERRIEEERFRLEEEQ 244
>AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical
protein Y39B6A.6 protein.
Length = 321
Score = 27.5 bits (58), Expect = 5.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 428 VIGRSGRCDLTGSSRSFSIFFLLVRSFSCLNSGSACGVMI 309
V+ G C +TG SR F I + +V F L + +CG+ +
Sbjct: 126 VVAMLGCCGITGRSRPFLIIYSMV-VFLLLVATLSCGIYL 164
>EF090260-1|ABK78773.1| 99|Caenorhabditis elegans glycoprotein
hormone beta 5 protein.
Length = 99
Score = 27.1 bits (57), Expect = 7.4
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = -1
Query: 273 PIRFNHT*LCTAETPSLVVVTLDDPVAATDEDLVQFRVPHCFD 145
P R ++ +CT T S V LDD DE + VPH D
Sbjct: 44 PPRVQNSKVCTLVTTSTRKVVLDDCDDGADESVKFVMVPHGTD 86
>AF022982-10|AAB69939.1| 99|Caenorhabditis elegans Hypothetical
protein T23B12.8a protein.
Length = 99
Score = 27.1 bits (57), Expect = 7.4
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = -1
Query: 273 PIRFNHT*LCTAETPSLVVVTLDDPVAATDEDLVQFRVPHCFD 145
P R ++ +CT T S V LDD DE + VPH D
Sbjct: 44 PPRVQNSKVCTLVTTSTRKVVLDDCDDGADESVKFVMVPHGTD 86
>AF022982-9|ABS83856.1| 125|Caenorhabditis elegans Hypothetical
protein T23B12.8b protein.
Length = 125
Score = 27.1 bits (57), Expect = 7.4
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = -1
Query: 273 PIRFNHT*LCTAETPSLVVVTLDDPVAATDEDLVQFRVPHCFD 145
P R ++ +CT T S V LDD DE + VPH D
Sbjct: 70 PPRVQNSKVCTLVTTSTRKVVLDDCDDGADESVKFVMVPHGTD 112
>Z83217-3|CAB05682.3| 610|Caenorhabditis elegans Hypothetical
protein C10C6.5 protein.
Length = 610
Score = 26.6 bits (56), Expect = 9.8
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -2
Query: 392 SSRSFSIFFLLVRSFSCLNSGSACGVMICCV 300
SS + + + +F S SACG+MI C+
Sbjct: 464 SSSITQVLYACLIAFLIEQSSSACGIMISCI 494
>U23525-5|AAC46568.1| 465|Caenorhabditis elegans Yeast smf
(divalent cation transporter)homolog protein 2 protein.
Length = 465
Score = 26.6 bits (56), Expect = 9.8
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -2
Query: 314 MICCVLTTSIDCFFLFALTTHNF 246
+IC ++T I+ +F+F T NF
Sbjct: 375 IICGIITIGINVYFIFQYVTENF 397
>L19247-1|AAC37166.1| 223|Caenorhabditis elegans homeobox protein
protein.
Length = 223
Score = 26.6 bits (56), Expect = 9.8
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +1
Query: 277 KQSIEVVSTQQIITPHALPLFRQEKLRTSKKKMEKDRLDPVKSHRPDLPITSGQG 441
K+ E + Q +T + ++ Q R K K EK R+D H P LP +G
Sbjct: 139 KKQREELRLQTQLTDRQIKIWFQN--RRMKAKKEKQRVDDHTEHTPLLPANPPKG 191
>L15201-6|AAP82660.1| 222|Caenorhabditis elegans Egg laying
defective protein 5,isoform c protein.
Length = 222
Score = 26.6 bits (56), Expect = 9.8
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +1
Query: 277 KQSIEVVSTQQIITPHALPLFRQEKLRTSKKKMEKDRLDPVKSHRPDLPITSGQG 441
K+ E + Q +T + ++ Q R K K EK R+D H P LP +G
Sbjct: 138 KKQREELRLQTQLTDRQIKIWFQN--RRMKAKKEKQRVDDHTEHTPLLPANPPKG 190
>L15201-5|AAA27943.2| 219|Caenorhabditis elegans Egg laying
defective protein 5,isoform a protein.
Length = 219
Score = 26.6 bits (56), Expect = 9.8
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +1
Query: 277 KQSIEVVSTQQIITPHALPLFRQEKLRTSKKKMEKDRLDPVKSHRPDLPITSGQG 441
K+ E + Q +T + ++ Q R K K EK R+D H P LP +G
Sbjct: 135 KKQREELRLQTQLTDRQIKIWFQN--RRMKAKKEKQRVDDHTEHTPLLPANPPKG 187
>L15201-4|AAN84878.1| 223|Caenorhabditis elegans Egg laying
defective protein 5,isoform b protein.
Length = 223
Score = 26.6 bits (56), Expect = 9.8
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +1
Query: 277 KQSIEVVSTQQIITPHALPLFRQEKLRTSKKKMEKDRLDPVKSHRPDLPITSGQG 441
K+ E + Q +T + ++ Q R K K EK R+D H P LP +G
Sbjct: 139 KKQREELRLQTQLTDRQIKIWFQN--RRMKAKKEKQRVDDHTEHTPLLPANPPKG 191
>AF039044-7|AAG24125.1| 125|Caenorhabditis elegans Hypothetical
protein F48G7.9 protein.
Length = 125
Score = 26.6 bits (56), Expect = 9.8
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -2
Query: 161 CHTALIT-CESVTSNRVTISNVFASKKVNFPTSSPRFNDSP 42
CH ++IT C +S R ++++V S K N+P+ S SP
Sbjct: 68 CHASMITCCVYDSSRRSSLASVSTSTK-NWPSKSSSAPSSP 107
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,084,913
Number of Sequences: 27780
Number of extensions: 188257
Number of successful extensions: 729
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 728
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 924715866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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