Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_E01
(479 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 251 3e-67
03_01_0547 + 4093196-4093657,4094267-4095148 251 3e-67
03_01_0544 + 4082528-4082989,4083585-4084466 251 3e-67
03_01_0543 + 4076981-4077442,4078145-4079026 251 3e-67
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 64 4e-11
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 60 7e-10
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 60 7e-10
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 56 2e-08
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 48 3e-06
02_04_0462 + 23131433-23132836 42 2e-04
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 37 0.007
11_01_0169 - 1365984-1366681,1368669-1368745,1369133-1369257,136... 30 1.1
05_03_0304 - 12000760-12001164,12001176-12001273,12004858-12005152 29 2.0
11_06_0516 + 24502645-24504507 29 2.6
10_08_1038 - 22485394-22485960,22486712-22487197 28 3.4
09_02_0484 + 9804351-9805203,9806204-9806760,9807243-9807959 28 3.4
11_06_0596 + 25385744-25388890 28 4.5
06_03_1311 - 29241884-29242054,29242802-29242879,29242968-292430... 28 4.5
01_01_0677 + 5201089-5201177,5201325-5202183,5202321-5202794 28 4.5
12_01_0831 - 7688342-7688772,7690678-7692610,7693142-7693915,769... 27 6.0
11_04_0242 - 15273774-15274043,15274131-15274235 27 6.0
04_04_0436 + 25186144-25187915,25188020-25188077,25188472-25188888 27 6.0
03_05_0896 - 28592658-28593331,28594069-28595455 27 6.0
12_01_0171 - 1268803-1269500,1271491-1271567,1271941-1272065,127... 27 7.9
11_03_0079 + 9669666-9669728,9670779-9672545 27 7.9
10_01_0171 + 1917520-1918056,1919201-1919336,1921873-1922060,192... 27 7.9
03_05_0010 + 19622430-19622512,19622539-19623082,19623361-196237... 27 7.9
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 251 bits (614), Expect = 3e-67
Identities = 112/159 (70%), Positives = 137/159 (86%)
Frame = +3
Query: 3 TRVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIV 182
T VKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P + AA FT+QVI+
Sbjct: 275 TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVII 334
Query: 183 LNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVP 362
+NHPGQI NGY PVLDCHT+HIA KFAE+ K+DRR+GK E PK +K+GDA +V ++P
Sbjct: 335 MNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIP 394
Query: 363 SKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNFKE 479
+KP+ VE+F E+PPLGRFAVRDMRQTVAVGVIK V K+
Sbjct: 395 TKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVEKKD 433
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 251 bits (614), Expect = 3e-67
Identities = 112/159 (70%), Positives = 137/159 (86%)
Frame = +3
Query: 3 TRVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIV 182
T VKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P + AA FT+QVI+
Sbjct: 275 TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVII 334
Query: 183 LNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVP 362
+NHPGQI NGY PVLDCHT+HIA KFAE+ K+DRR+GK E PK +K+GDA +V ++P
Sbjct: 335 MNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIP 394
Query: 363 SKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNFKE 479
+KP+ VE+F E+PPLGRFAVRDMRQTVAVGVIK V K+
Sbjct: 395 TKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVEKKD 433
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 251 bits (614), Expect = 3e-67
Identities = 112/159 (70%), Positives = 137/159 (86%)
Frame = +3
Query: 3 TRVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIV 182
T VKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P + AA FT+QVI+
Sbjct: 275 TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVII 334
Query: 183 LNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVP 362
+NHPGQI NGY PVLDCHT+HIA KFAE+ K+DRR+GK E PK +K+GDA +V ++P
Sbjct: 335 MNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIP 394
Query: 363 SKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNFKE 479
+KP+ VE+F E+PPLGRFAVRDMRQTVAVGVIK V K+
Sbjct: 395 TKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVEKKD 433
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 251 bits (614), Expect = 3e-67
Identities = 112/159 (70%), Positives = 137/159 (86%)
Frame = +3
Query: 3 TRVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIV 182
T VKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P + AA FT+QVI+
Sbjct: 275 TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVII 334
Query: 183 LNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVP 362
+NHPGQI NGY PVLDCHT+HIA KFAE+ K+DRR+GK E PK +K+GDA +V ++P
Sbjct: 335 MNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIP 394
Query: 363 SKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNFKE 479
+KP+ VE+F E+PPLGRFAVRDMRQTVAVGVIK V K+
Sbjct: 395 TKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVEKKD 433
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 64.5 bits (150), Expect = 4e-11
Identities = 36/149 (24%), Positives = 70/149 (46%), Gaps = 9/149 (6%)
Frame = +3
Query: 6 RVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVL 185
+V + + ++ A P +NV + + +++ G+V S NP +F AQ+ +L
Sbjct: 268 KVIGISLDEHKVRRAGPAENVRVKLSGIEDEDIMAGFVLS-SIGNPVGAVTEFNAQLQIL 326
Query: 186 N--HPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKS-------IKSGD 338
+ GY VL H+ C+ ++ E++D + K + K +K+G
Sbjct: 327 ELLDNAIFTAGYKAVLHIHSVVEECEIVDLIEEIDMKKKKEADPKKKKPKRKPLFVKNGA 386
Query: 339 AAIVNLVPSKPLCVESFQEFPPLGRFAVR 425
+ + + +C+E+F +FP LGRF +R
Sbjct: 387 VVVCRIQVNNLICIENFSDFPQLGRFTLR 415
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 60.5 bits (140), Expect = 7e-10
Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Frame = +3
Query: 9 VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNP--PRGAADFTA-QVI 179
VKS+E + A GDNV +++ + +L + G NP P ++F +V+
Sbjct: 524 VKSIERDSNSCDIARAGDNVAVSLQGIDGSKL----ILGGILCNPGFPVPVSNFLELRVL 579
Query: 180 VLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLV 359
VL+ I GY H A + +I +D+ GK ++ P+ +KS A+V +
Sbjct: 580 VLDVTIPILIGYQVEFHIHHVKEAARVTKIVALLDK-AGKPSKTAPRFLKSKQNAVVQVT 638
Query: 360 PSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVI 458
P+CV+ F + LGR +R T+AVGV+
Sbjct: 639 LDAPVCVQEFSKCRALGRAFLRSSGSTIAVGVV 671
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 60.5 bits (140), Expect = 7e-10
Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Frame = +3
Query: 9 VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNP--PRGAADFTA-QVI 179
VKS+E + A GDNV +++ + +L + G NP P ++F +V+
Sbjct: 524 VKSIERDSNSCDIARAGDNVAVSLQGIDGSKL----ILGGILCNPGFPVPVSNFLELRVL 579
Query: 180 VLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLV 359
VL+ I GY H A + +I +D+ GK ++ P+ +KS A+V +
Sbjct: 580 VLDVTIPILIGYQVEFHIHHVKEAARVTKIVALLDK-AGKPSKTAPRFLKSKQNAVVQVT 638
Query: 360 PSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVI 458
P+CV+ F + LGR +R T+AVGV+
Sbjct: 639 LDAPVCVQEFSKCRALGRAFLRSSGSTIAVGVV 671
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 55.6 bits (128), Expect = 2e-08
Identities = 37/153 (24%), Positives = 71/153 (46%)
Frame = +3
Query: 9 VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLN 188
VK++E + + A GDNV ++ + + G V + P A+ +++VL+
Sbjct: 508 VKTIERNSSSCNLARAGDNVAIGLQGIDPSHIMPGGVICHP-DYPVSVASCLELKILVLD 566
Query: 189 HPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSK 368
I G ++ +I ++++TGK+++ P+ + S A++ + K
Sbjct: 567 ITVPILVGL---------QVSASMVKILSLLEQKTGKASKKIPRFLTSRQTAVIEVKLEK 617
Query: 369 PLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 467
+CVE F LGR +R T+AVG++ V
Sbjct: 618 EVCVEEFSNLKALGRVFLRSQGNTIAVGIVSRV 650
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 48.4 bits (110), Expect = 3e-06
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 2/110 (1%)
Frame = +3
Query: 6 RVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVL 185
+V SV + ++ A PG+NV + + ++ G+V K NP ++F AQ+ +L
Sbjct: 223 KVISVHCDEDRVRSAAPGENVRVKLSGIEEDDITAGFVLSSIK-NPVSAISEFRAQLQIL 281
Query: 186 N--HPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIK 329
+ GY VL H+ C+ E+ E++D + K + K K
Sbjct: 282 ELLDNAIFTAGYKAVLHIHSVVEECEIVELIEEIDLKRRKEGDIKKKKSK 331
>02_04_0462 + 23131433-23132836
Length = 467
Score = 42.3 bits (95), Expect = 2e-04
Identities = 38/156 (24%), Positives = 62/156 (39%), Gaps = 3/156 (1%)
Frame = +3
Query: 9 VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLN 188
V VEM + + +A+ GDNVG ++ + ++ RG V + P D V+ +
Sbjct: 324 VTGVEMFQKTMDDAMAGDNVGLLLRGMQKDDIERGMVLAKPASITPHTKFDAVVYVLKKD 383
Query: 189 HPGQIS---NGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLV 359
G+ S GY P T + +I D + K GD + +
Sbjct: 384 EGGRHSPFFPGYRPQFYMRTTDVTGNVTKIMNDKD--------EEAKMCMPGDRVKMVVE 435
Query: 360 PSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 467
+P+ E RFA+R+ +TV GVI +
Sbjct: 436 LIQPVACEQGM------RFAIREGGKTVGAGVINTI 465
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 37.1 bits (82), Expect = 0.007
Identities = 39/155 (25%), Positives = 63/155 (40%)
Frame = +3
Query: 3 TRVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIV 182
T V VEM + L GDNVG ++ + +++RG V K + F A++ V
Sbjct: 313 TTVTGVEMFKKILDHGEAGDNVGLLLRGLKRGDVQRGQVV--CKPGTVKTYQKFEAEIYV 370
Query: 183 LNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVP 362
L +T L ++ + A++ KV D + + GD
Sbjct: 371 LTK--DEGGRHTAFLSNYSPQFYFRTADVTGKV------VLPDGVEMVMPGDNVTAGFEL 422
Query: 363 SKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 467
P+ +E P RFA+R+ +TV GV+ V
Sbjct: 423 ISPVPLE------PGQRFALREGGRTVGAGVVSKV 451
>11_01_0169 -
1365984-1366681,1368669-1368745,1369133-1369257,
1369338-1369426,1370041-1370126,1370705-1370970
Length = 446
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -1
Query: 404 GWEFL-EGLHTQGLGGNQVDNGGITRFNGF 318
G E+L EG + GGN +DN G+T +N F
Sbjct: 365 GMEYLFEGCSSITEGGNSMDNSGVTEYNLF 394
>05_03_0304 - 12000760-12001164,12001176-12001273,12004858-12005152
Length = 265
Score = 29.1 bits (62), Expect = 2.0
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1
Query: 340 PPLSTWFPPSPCVW 381
PP+S+ PPSPC W
Sbjct: 175 PPISSGMPPSPCEW 188
>11_06_0516 + 24502645-24504507
Length = 620
Score = 28.7 bits (61), Expect = 2.6
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = +3
Query: 18 VEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPG 197
VE HEAL AV D V S++E+ R GD + PP + V++ G
Sbjct: 114 VEQVHEALL-AVDAD---IEVIKASIREVYRFPCDGDERRGPPPPSTAPATGVVMTRRMG 169
Query: 198 QISNG 212
+I G
Sbjct: 170 EIRRG 174
>10_08_1038 - 22485394-22485960,22486712-22487197
Length = 350
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +2
Query: 167 SASHCAKS--PRSNIKRIHTCIGLPHSPHSL 253
S+S CA + P NI RIH IGL SP L
Sbjct: 96 SSSSCAAAAPPSPNILRIHAPIGLARSPAHL 126
>09_02_0484 + 9804351-9805203,9806204-9806760,9807243-9807959
Length = 708
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = -2
Query: 340 ASPDLMDLGLSSVDLPVRRSTFSL 269
A+ DLM G+S V+LPVRR+ F++
Sbjct: 580 ATLDLMYSGISMVNLPVRRNHFAV 603
>11_06_0596 + 25385744-25388890
Length = 1048
Score = 27.9 bits (59), Expect = 4.5
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +1
Query: 265 KSKRKSTVVLVNQQRTTLNPLNLVMPPLSTWFPPSPCVWSP 387
K+ K +N+ TTL L++ M P+S+W + +P
Sbjct: 832 KANLKDLFAQINKLHTTLRSLSIRMKPVSSWGSTEAVLMTP 872
>06_03_1311 -
29241884-29242054,29242802-29242879,29242968-29243049,
29243141-29243212,29243316-29243437,29243541-29243596,
29244264-29244333,29244435-29244518,29244599-29244667,
29244855-29244928,29245014-29245125,29245220-29245510
Length = 426
Score = 27.9 bits (59), Expect = 4.5
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 262 PKSKRKSTVVLVNQQRTTLNPLNLVMP 342
P+ R+S + Q TT++P NLV+P
Sbjct: 103 PRRNRRSPALRAAFQETTISPANLVLP 129
>01_01_0677 + 5201089-5201177,5201325-5202183,5202321-5202794
Length = 473
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = -2
Query: 175 TCAVKSAAPLGGLFFESPAT*PRRNSLTDTFLTLKPTLSPGTASCRAS 32
+ + A P G + RR L D+FL LK L PG+ + S
Sbjct: 274 SASAAEAPPSGNQLQHMISERKRREKLNDSFLALKAVLPPGSKKDKTS 321
>12_01_0831 -
7688342-7688772,7690678-7692610,7693142-7693915,
7694019-7694142,7696084-7696189,7696346-7696532
Length = 1184
Score = 27.5 bits (58), Expect = 6.0
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +1
Query: 250 PANLPKSKRKSTVVLVNQQRTTLNPLNLVMPPLSTW---FPPSPCVWSPSRNSHPSVVSP 420
P L S R + + + +P + PP +W PPS +P R S PS S
Sbjct: 153 PIRLSPSPRSMSRTRPSSAASRSSPPFALQPPTPSWRPSTPPSAKTLTPPRRS-PSPAS- 210
Query: 421 CVT*GRRSPS 450
+T RRSPS
Sbjct: 211 TLTPPRRSPS 220
>11_04_0242 - 15273774-15274043,15274131-15274235
Length = 124
Score = 27.5 bits (58), Expect = 6.0
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 261 QICRLCGLCGNPIQVCI 211
QIC +C CG P VCI
Sbjct: 74 QICAVCTCCGGPHGVCI 90
>04_04_0436 + 25186144-25187915,25188020-25188077,25188472-25188888
Length = 748
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 105 RRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGY 215
RRG +++ PR +A + QV+ HP +S GY
Sbjct: 175 RRGSNCVENRRRKPRSSAQSSPQVVTPRHP--VSEGY 209
>03_05_0896 - 28592658-28593331,28594069-28595455
Length = 686
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +3
Query: 243 HIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPP 404
H+ + EIK+ +R G+ + ++++GD SKP E F P
Sbjct: 638 HVVLRIEEIKKSSERLEGRDPQQQASNLEAGDDQ-----TSKPESAEGLNPFAP 686
>12_01_0171 -
1268803-1269500,1271491-1271567,1271941-1272065,
1272146-1272234,1272851-1272936,1273509-1273765
Length = 443
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -1
Query: 404 GWEFL-EGLHTQGLGGNQVDNGGITRFNGF 318
G E+L EG + GGN +DN G+ +N F
Sbjct: 362 GMEYLFEGCSSITEGGNSMDNSGMAEYNLF 391
>11_03_0079 + 9669666-9669728,9670779-9672545
Length = 609
Score = 27.1 bits (57), Expect = 7.9
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +3
Query: 162 FTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVD 284
FTA+ +H Q++N VLDC AH+ CK+ + E ++
Sbjct: 572 FTAENRSKSH--QVNN-VLAVLDCLQAHMECKYDMLTESLE 609
>10_01_0171 +
1917520-1918056,1919201-1919336,1921873-1922060,
1922491-1922694,1923913-1924425
Length = 525
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -3
Query: 477 P*SSQPLLHRRRPSASCHARR 415
P S PL+HR PSAS H R
Sbjct: 502 PIQSVPLVHRVSPSASAHQNR 522
>03_05_0010 +
19622430-19622512,19622539-19623082,19623361-19623767,
19623831-19624167,19624290-19624508,19625522-19625826,
19626128-19626287,19626422-19626547
Length = 726
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +3
Query: 267 IKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPS 365
IKE + R GKST D P +G I PS
Sbjct: 207 IKEAITTRGGKSTRDPPYPNPTGTNGIAREAPS 239
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,080,651
Number of Sequences: 37544
Number of extensions: 391328
Number of successful extensions: 1345
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1339
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 991020332
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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