Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_D24
         (91 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    21   1.3  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    21   1.3  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    19   5.4  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       19   5.4  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          19   7.1  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      19   7.1  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    18   9.4  

>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 1.3
 Identities = 9/20 (45%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
 Frame = +2

Query: 26  FISCIFVLKYFF-LFFIYTF 82
           F++CIF+  Y   L FI  F
Sbjct: 220 FVTCIFIWAYVIPLIFIILF 239


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 1.3
 Identities = 9/20 (45%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
 Frame = +2

Query: 26  FISCIFVLKYFF-LFFIYTF 82
           F++CIF+  Y   L FI  F
Sbjct: 220 FVTCIFIWAYVIPLIFIILF 239


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
          protein 9 protein.
          Length = 423

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 26 FISCIFVLKYFFLFFIYTF 82
          F + IF +KY + +F Y F
Sbjct: 27 FKANIFQVKYQWKYFDYNF 45


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = +3

Query: 27  LFHVSSSLNIFFYSSFIHF 83
           +FH+ +  N+ +YS  + F
Sbjct: 174 VFHLETHPNVTWYSQCVTF 192


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 5/10 (50%), Positives = 9/10 (90%)
 Frame = +2

Query: 38  IFVLKYFFLF 67
           +++ KYF+LF
Sbjct: 533 VYLQKYFYLF 542


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 5/10 (50%), Positives = 9/10 (90%)
 Frame = +2

Query: 38  IFVLKYFFLF 67
           +++ KYF+LF
Sbjct: 533 VYLQKYFYLF 542


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +1

Query: 25  LYFMYLRP*IFFSI 66
           L+F+Y++P   FS+
Sbjct: 133 LFFIYVQPSATFSL 146


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,219
Number of Sequences: 438
Number of extensions: 180
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 11
effective length of database: 141,525
effective search space used:  2547450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)