Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_D23
(452 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L19527-1|AAA19815.1| 136|Homo sapiens ribosomal protein L27 pro... 109 6e-24
L05094-1|AAC15857.1| 136|Homo sapiens ribosomal protein L27 pro... 109 6e-24
BC098560-1|AAH98560.1| 136|Homo sapiens ribosomal protein L27 p... 109 6e-24
BC010026-1|AAH10026.1| 136|Homo sapiens ribosomal protein L27 p... 109 6e-24
BC007273-1|AAH07273.1| 136|Homo sapiens ribosomal protein L27 p... 109 6e-24
BC002588-1|AAH02588.1| 136|Homo sapiens ribosomal protein L27 p... 109 6e-24
BC001700-1|AAH01700.1| 136|Homo sapiens ribosomal protein L27 p... 109 6e-24
AB061851-1|BAB79492.1| 136|Homo sapiens ribosomal protein L27 p... 109 6e-24
BC021886-1|AAH21886.1| 140|Homo sapiens RPL27 protein protein. 102 7e-22
U25752-1|AAA93226.1| 40|Homo sapiens ribosomal protein L27 pro... 60 3e-09
CR541823-1|CAG46622.1| 174|Homo sapiens RBM8A protein. 30 4.3
X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6 prot... 29 5.6
S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140 pro... 29 5.6
D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein TAXRE... 29 5.6
CR541805-1|CAG46604.1| 174|Homo sapiens RBM8A protein. 29 5.6
BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6 pr... 29 5.6
BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6 pr... 29 5.6
BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6 pr... 29 5.6
BC071577-1|AAH71577.1| 174|Homo sapiens RNA binding motif prote... 29 5.6
BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6 pr... 29 5.6
BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6 pr... 29 5.6
BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6 pr... 29 5.6
BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6 pr... 29 5.6
BC017088-1|AAH17088.1| 174|Homo sapiens RNA binding motif prote... 29 5.6
BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6 pr... 29 5.6
AF403012-1|AAL26999.1| 174|Homo sapiens ribonucleoprotein RBM8 ... 29 5.6
AF299118-1|AAG27091.1| 174|Homo sapiens RNA-binding protein Y14... 29 5.6
AF231512-1|AAG16782.1| 158|Homo sapiens RNA binding motif prote... 29 5.6
AF231511-1|AAG16781.1| 173|Homo sapiens RNA binding motif prote... 29 5.6
AF198620-1|AAF37551.1| 173|Homo sapiens RNA binding motif prote... 29 5.6
AF182415-1|AAG14951.1| 158|Homo sapiens MDS014 protein. 29 5.6
AF127761-1|AAD21089.1| 174|Homo sapiens ribonucleoprotein RBM8 ... 29 5.6
AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6 pr... 29 5.6
>L19527-1|AAA19815.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 109 bits (261), Expect = 6e-24
Identities = 50/73 (68%), Positives = 59/73 (80%)
Frame = +2
Query: 29 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 208
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 209 KIHXAVENQAFRK 247
KI + ++F K
Sbjct: 61 KIAKRSKIKSFVK 73
Score = 102 bits (244), Expect = 7e-22
Identities = 50/78 (64%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Frame = +3
Query: 204 KIKFTXRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRF 377
K K RSKIK FVK NYNHLMPTRYSVD +K KD+ +DPA ++K R +V+F
Sbjct: 59 KKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKF 118
Query: 378 EERYKSGKNKWFFQKLRF 431
EERYK+GKNKWFFQKLRF
Sbjct: 119 EERYKTGKNKWFFQKLRF 136
>L05094-1|AAC15857.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 109 bits (261), Expect = 6e-24
Identities = 50/73 (68%), Positives = 59/73 (80%)
Frame = +2
Query: 29 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 208
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 209 KIHXAVENQAFRK 247
KI + ++F K
Sbjct: 61 KIAKRSKIKSFVK 73
Score = 102 bits (244), Expect = 7e-22
Identities = 50/78 (64%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Frame = +3
Query: 204 KIKFTXRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRF 377
K K RSKIK FVK NYNHLMPTRYSVD +K KD+ +DPA ++K R +V+F
Sbjct: 59 KKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKF 118
Query: 378 EERYKSGKNKWFFQKLRF 431
EERYK+GKNKWFFQKLRF
Sbjct: 119 EERYKTGKNKWFFQKLRF 136
>BC098560-1|AAH98560.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 109 bits (261), Expect = 6e-24
Identities = 50/73 (68%), Positives = 59/73 (80%)
Frame = +2
Query: 29 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 208
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 209 KIHXAVENQAFRK 247
KI + ++F K
Sbjct: 61 KIAKRSKIKSFVK 73
Score = 102 bits (244), Expect = 7e-22
Identities = 50/78 (64%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Frame = +3
Query: 204 KIKFTXRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRF 377
K K RSKIK FVK NYNHLMPTRYSVD +K KD+ +DPA ++K R +V+F
Sbjct: 59 KKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKF 118
Query: 378 EERYKSGKNKWFFQKLRF 431
EERYK+GKNKWFFQKLRF
Sbjct: 119 EERYKTGKNKWFFQKLRF 136
>BC010026-1|AAH10026.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 109 bits (261), Expect = 6e-24
Identities = 50/73 (68%), Positives = 59/73 (80%)
Frame = +2
Query: 29 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 208
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 209 KIHXAVENQAFRK 247
KI + ++F K
Sbjct: 61 KIAKRSKIKSFVK 73
Score = 102 bits (244), Expect = 7e-22
Identities = 50/78 (64%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Frame = +3
Query: 204 KIKFTXRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRF 377
K K RSKIK FVK NYNHLMPTRYSVD +K KD+ +DPA ++K R +V+F
Sbjct: 59 KKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKF 118
Query: 378 EERYKSGKNKWFFQKLRF 431
EERYK+GKNKWFFQKLRF
Sbjct: 119 EERYKTGKNKWFFQKLRF 136
>BC007273-1|AAH07273.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 109 bits (261), Expect = 6e-24
Identities = 50/73 (68%), Positives = 59/73 (80%)
Frame = +2
Query: 29 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 208
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 209 KIHXAVENQAFRK 247
KI + ++F K
Sbjct: 61 KIAKRSKIKSFVK 73
Score = 102 bits (244), Expect = 7e-22
Identities = 50/78 (64%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Frame = +3
Query: 204 KIKFTXRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRF 377
K K RSKIK FVK NYNHLMPTRYSVD +K KD+ +DPA ++K R +V+F
Sbjct: 59 KKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKF 118
Query: 378 EERYKSGKNKWFFQKLRF 431
EERYK+GKNKWFFQKLRF
Sbjct: 119 EERYKTGKNKWFFQKLRF 136
>BC002588-1|AAH02588.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 109 bits (261), Expect = 6e-24
Identities = 50/73 (68%), Positives = 59/73 (80%)
Frame = +2
Query: 29 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 208
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 209 KIHXAVENQAFRK 247
KI + ++F K
Sbjct: 61 KIAKRSKIKSFVK 73
Score = 102 bits (244), Expect = 7e-22
Identities = 50/78 (64%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Frame = +3
Query: 204 KIKFTXRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRF 377
K K RSKIK FVK NYNHLMPTRYSVD +K KD+ +DPA ++K R +V+F
Sbjct: 59 KKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKF 118
Query: 378 EERYKSGKNKWFFQKLRF 431
EERYK+GKNKWFFQKLRF
Sbjct: 119 EERYKTGKNKWFFQKLRF 136
>BC001700-1|AAH01700.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 109 bits (261), Expect = 6e-24
Identities = 50/73 (68%), Positives = 59/73 (80%)
Frame = +2
Query: 29 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 208
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 209 KIHXAVENQAFRK 247
KI + ++F K
Sbjct: 61 KIAKRSKIKSFVK 73
Score = 102 bits (244), Expect = 7e-22
Identities = 50/78 (64%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Frame = +3
Query: 204 KIKFTXRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRF 377
K K RSKIK FVK NYNHLMPTRYSVD +K KD+ +DPA ++K R +V+F
Sbjct: 59 KKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKF 118
Query: 378 EERYKSGKNKWFFQKLRF 431
EERYK+GKNKWFFQKLRF
Sbjct: 119 EERYKTGKNKWFFQKLRF 136
>AB061851-1|BAB79492.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 109 bits (261), Expect = 6e-24
Identities = 50/73 (68%), Positives = 59/73 (80%)
Frame = +2
Query: 29 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 208
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 209 KIHXAVENQAFRK 247
KI + ++F K
Sbjct: 61 KIAKRSKIKSFVK 73
Score = 102 bits (244), Expect = 7e-22
Identities = 50/78 (64%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Frame = +3
Query: 204 KIKFTXRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRF 377
K K RSKIK FVK NYNHLMPTRYSVD +K KD+ +DPA ++K R +V+F
Sbjct: 59 KKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKF 118
Query: 378 EERYKSGKNKWFFQKLRF 431
EERYK+GKNKWFFQKLRF
Sbjct: 119 EERYKTGKNKWFFQKLRF 136
>BC021886-1|AAH21886.1| 140|Homo sapiens RPL27 protein protein.
Length = 140
Score = 102 bits (244), Expect = 7e-22
Identities = 50/78 (64%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Frame = +3
Query: 204 KIKFTXRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRF 377
K K RSKIK FVK NYNHLMPTRYSVD +K KD+ +DPA ++K R +V+F
Sbjct: 63 KKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKF 122
Query: 378 EERYKSGKNKWFFQKLRF 431
EERYK+GKNKWFFQKLRF
Sbjct: 123 EERYKTGKNKWFFQKLRF 140
Score = 88.2 bits (209), Expect = 1e-17
Identities = 40/62 (64%), Positives = 49/62 (79%)
Frame = +2
Query: 62 LVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHXAVENQAF 241
LVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK KI + ++F
Sbjct: 16 LVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSF 75
Query: 242 RK 247
K
Sbjct: 76 VK 77
>U25752-1|AAA93226.1| 40|Homo sapiens ribosomal protein L27
protein.
Length = 40
Score = 60.5 bits (140), Expect = 3e-09
Identities = 26/39 (66%), Positives = 33/39 (84%), Gaps = 1/39 (2%)
Frame = +3
Query: 318 KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 431
KD+ +DPA ++K R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 2 KDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 40
>CR541823-1|CAG46622.1| 174|Homo sapiens RBM8A protein.
Length = 174
Score = 29.9 bits (64), Expect = 4.3
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = +3
Query: 171 DTRARFIKGWEKIKFTXRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKDPAKRK 347
D R ++KG+ +++ + + ++G+N LM SVD+ F + K + +R+
Sbjct: 107 DRRTGYLKGYTLVEYETYKEAQAVMEGLNGQDLMGQPISVDWCFVRGPPKGKRRGGRRR 165
>X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 29.5 bits (63), Expect = 5.6
Identities = 9/38 (23%), Positives = 24/38 (63%)
Frame = +2
Query: 11 TEYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 124
+++ K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 134 SQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
>S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140
product protein.
Length = 207
Score = 29.5 bits (63), Expect = 5.6
Identities = 9/38 (23%), Positives = 24/38 (63%)
Frame = +2
Query: 11 TEYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 124
+++ K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 73 SQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASG 110
>D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 288
Score = 29.5 bits (63), Expect = 5.6
Identities = 9/38 (23%), Positives = 24/38 (63%)
Frame = +2
Query: 11 TEYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 124
+++ K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 134 SQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
>CR541805-1|CAG46604.1| 174|Homo sapiens RBM8A protein.
Length = 174
Score = 29.5 bits (63), Expect = 5.6
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = +3
Query: 171 DTRARFIKGWEKIKFTXRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKDPAKRK 347
D R ++KG+ +++ + + ++G+N LM SVD+ F + K + +R+
Sbjct: 107 DRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPKGKRRGGRRR 165
>BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 29.5 bits (63), Expect = 5.6
Identities = 9/38 (23%), Positives = 24/38 (63%)
Frame = +2
Query: 11 TEYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 124
+++ K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 134 SQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
>BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 29.5 bits (63), Expect = 5.6
Identities = 9/38 (23%), Positives = 24/38 (63%)
Frame = +2
Query: 11 TEYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 124
+++ K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 134 SQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
>BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 29.5 bits (63), Expect = 5.6
Identities = 9/38 (23%), Positives = 24/38 (63%)
Frame = +2
Query: 11 TEYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 124
+++ K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 134 SQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
>BC071577-1|AAH71577.1| 174|Homo sapiens RNA binding motif protein
8A protein.
Length = 174
Score = 29.5 bits (63), Expect = 5.6
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = +3
Query: 171 DTRARFIKGWEKIKFTXRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKDPAKRK 347
D R ++KG+ +++ + + ++G+N LM SVD+ F + K + +R+
Sbjct: 107 DRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPKGKRRGGRRR 165
>BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 29.5 bits (63), Expect = 5.6
Identities = 9/38 (23%), Positives = 24/38 (63%)
Frame = +2
Query: 11 TEYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 124
+++ K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 134 SQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
>BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 29.5 bits (63), Expect = 5.6
Identities = 9/38 (23%), Positives = 24/38 (63%)
Frame = +2
Query: 11 TEYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 124
+++ K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 134 SQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
>BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 29.5 bits (63), Expect = 5.6
Identities = 9/38 (23%), Positives = 24/38 (63%)
Frame = +2
Query: 11 TEYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 124
+++ K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 134 SQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
>BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 29.5 bits (63), Expect = 5.6
Identities = 9/38 (23%), Positives = 24/38 (63%)
Frame = +2
Query: 11 TEYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 124
+++ K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 134 SQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
>BC017088-1|AAH17088.1| 174|Homo sapiens RNA binding motif protein
8A protein.
Length = 174
Score = 29.5 bits (63), Expect = 5.6
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = +3
Query: 171 DTRARFIKGWEKIKFTXRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKDPAKRK 347
D R ++KG+ +++ + + ++G+N LM SVD+ F + K + +R+
Sbjct: 107 DRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPKGKRRGGRRR 165
>BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 29.5 bits (63), Expect = 5.6
Identities = 9/38 (23%), Positives = 24/38 (63%)
Frame = +2
Query: 11 TEYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 124
+++ K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 134 SQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
>AF403012-1|AAL26999.1| 174|Homo sapiens ribonucleoprotein RBM8
protein.
Length = 174
Score = 29.5 bits (63), Expect = 5.6
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = +3
Query: 171 DTRARFIKGWEKIKFTXRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKDPAKRK 347
D R ++KG+ +++ + + ++G+N LM SVD+ F + K + +R+
Sbjct: 107 DRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPKGKRRGGRRR 165
>AF299118-1|AAG27091.1| 174|Homo sapiens RNA-binding protein Y14
protein.
Length = 174
Score = 29.5 bits (63), Expect = 5.6
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = +3
Query: 171 DTRARFIKGWEKIKFTXRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKDPAKRK 347
D R ++KG+ +++ + + ++G+N LM SVD+ F + K + +R+
Sbjct: 107 DRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPKGKRRGGRRR 165
>AF231512-1|AAG16782.1| 158|Homo sapiens RNA binding motif protein
8B protein.
Length = 158
Score = 29.5 bits (63), Expect = 5.6
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = +3
Query: 171 DTRARFIKGWEKIKFTXRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKDPAKRK 347
D R ++KG+ +++ + + ++G+N LM SVD+ F + K + +R+
Sbjct: 91 DRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPKGKRRGGRRR 149
>AF231511-1|AAG16781.1| 173|Homo sapiens RNA binding motif protein
8A protein.
Length = 173
Score = 29.5 bits (63), Expect = 5.6
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = +3
Query: 171 DTRARFIKGWEKIKFTXRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKDPAKRK 347
D R ++KG+ +++ + + ++G+N LM SVD+ F + K + +R+
Sbjct: 106 DRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPKGKRRGGRRR 164
>AF198620-1|AAF37551.1| 173|Homo sapiens RNA binding motif protein
8 protein.
Length = 173
Score = 29.5 bits (63), Expect = 5.6
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = +3
Query: 171 DTRARFIKGWEKIKFTXRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKDPAKRK 347
D R ++KG+ +++ + + ++G+N LM SVD+ F + K + +R+
Sbjct: 106 DRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPKGKRRGGRRR 164
>AF182415-1|AAG14951.1| 158|Homo sapiens MDS014 protein.
Length = 158
Score = 29.5 bits (63), Expect = 5.6
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = +3
Query: 171 DTRARFIKGWEKIKFTXRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKDPAKRK 347
D R ++KG+ +++ + + ++G+N LM SVD+ F + K + +R+
Sbjct: 91 DRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPKGKRRGGRRR 149
>AF127761-1|AAD21089.1| 174|Homo sapiens ribonucleoprotein RBM8
protein.
Length = 174
Score = 29.5 bits (63), Expect = 5.6
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = +3
Query: 171 DTRARFIKGWEKIKFTXRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKDPAKRK 347
D R ++KG+ +++ + + ++G+N LM SVD+ F + K + +R+
Sbjct: 107 DRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPKGKRRGGRRR 165
>AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 29.5 bits (63), Expect = 5.6
Identities = 9/38 (23%), Positives = 24/38 (63%)
Frame = +2
Query: 11 TEYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 124
+++ K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 134 SQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,329,113
Number of Sequences: 237096
Number of extensions: 1400049
Number of successful extensions: 2971
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 2873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2962
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3758237868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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