Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_D21
(391 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y12065-1|CAA72789.1| 602|Homo sapiens hNop56 protein. 65 7e-11
BC104793-1|AAI04794.1| 594|Homo sapiens nucleolar protein 5A pr... 65 7e-11
BC104791-1|AAI04792.1| 594|Homo sapiens nucleolar protein 5A (5... 65 7e-11
BC018421-1|AAH18421.1| 447|Homo sapiens Unknown (protein for IM... 65 7e-11
AL049712-4|CAC01444.2| 594|Homo sapiens nucleolar protein 5A (5... 65 7e-11
AL049712-5|CAI22418.1| 281|Homo sapiens nucleolar protein 5A (5... 36 5e-07
BC032592-1|AAH32592.1| 529|Homo sapiens nucleolar protein NOP5/... 42 0.001
BC009306-1|AAH09306.1| 522|Homo sapiens NOP5/NOP58 protein prot... 42 0.001
AF263608-1|AAF91394.1| 529|Homo sapiens nucleolar protein 5 pro... 42 0.001
AF123534-1|AAD27610.1| 529|Homo sapiens nucleolar protein NOP5/... 42 0.001
AC064836-1|AAY24145.1| 529|Homo sapiens unknown protein. 42 0.001
>Y12065-1|CAA72789.1| 602|Homo sapiens hNop56 protein.
Length = 602
Score = 65.3 bits (152), Expect = 7e-11
Identities = 32/55 (58%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Frame = +2
Query: 230 ARVKCNVHRVNN-IDHTIYLRSSISSDKDVNTFSMTIREWYPYHFPELVSIVPEN 391
A+VK NV+RV+N I +I L + DKD+NTFSM +REWY YHFPELV I+ +N
Sbjct: 161 AKVKFNVNRVDNMIIQSISLLDQL--DKDINTFSMRVREWYGYHFPELVKIINDN 213
>BC104793-1|AAI04794.1| 594|Homo sapiens nucleolar protein 5A
protein.
Length = 594
Score = 65.3 bits (152), Expect = 7e-11
Identities = 32/55 (58%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Frame = +2
Query: 230 ARVKCNVHRVNN-IDHTIYLRSSISSDKDVNTFSMTIREWYPYHFPELVSIVPEN 391
A+VK NV+RV+N I +I L + DKD+NTFSM +REWY YHFPELV I+ +N
Sbjct: 155 AKVKFNVNRVDNMIIQSISLLDQL--DKDINTFSMRVREWYGYHFPELVKIINDN 207
>BC104791-1|AAI04792.1| 594|Homo sapiens nucleolar protein 5A
(56kDa with KKE/D repeat) protein.
Length = 594
Score = 65.3 bits (152), Expect = 7e-11
Identities = 32/55 (58%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Frame = +2
Query: 230 ARVKCNVHRVNN-IDHTIYLRSSISSDKDVNTFSMTIREWYPYHFPELVSIVPEN 391
A+VK NV+RV+N I +I L + DKD+NTFSM +REWY YHFPELV I+ +N
Sbjct: 155 AKVKFNVNRVDNMIIQSISLLDQL--DKDINTFSMRVREWYGYHFPELVKIINDN 207
>BC018421-1|AAH18421.1| 447|Homo sapiens Unknown (protein for
IMAGE:4448930) protein.
Length = 447
Score = 65.3 bits (152), Expect = 7e-11
Identities = 32/55 (58%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Frame = +2
Query: 230 ARVKCNVHRVNN-IDHTIYLRSSISSDKDVNTFSMTIREWYPYHFPELVSIVPEN 391
A+VK NV+RV+N I +I L + DKD+NTFSM +REWY YHFPELV I+ +N
Sbjct: 151 AKVKFNVNRVDNMIIQSISLLDQL--DKDINTFSMRVREWYGYHFPELVKIINDN 203
>AL049712-4|CAC01444.2| 594|Homo sapiens nucleolar protein 5A
(56kDa with KKE/D repeat) protein.
Length = 594
Score = 65.3 bits (152), Expect = 7e-11
Identities = 32/55 (58%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Frame = +2
Query: 230 ARVKCNVHRVNN-IDHTIYLRSSISSDKDVNTFSMTIREWYPYHFPELVSIVPEN 391
A+VK NV+RV+N I +I L + DKD+NTFSM +REWY YHFPELV I+ +N
Sbjct: 155 AKVKFNVNRVDNMIIQSISLLDQL--DKDINTFSMRVREWYGYHFPELVKIINDN 207
>AL049712-5|CAI22418.1| 281|Homo sapiens nucleolar protein 5A
(56kDa with KKE/D repeat) protein.
Length = 281
Score = 36.3 bits (80), Expect(2) = 5e-07
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +2
Query: 338 REWYPYHFPELVSIVPEN 391
REWY YHFPELV I+ +N
Sbjct: 219 REWYGYHFPELVKIINDN 236
Score = 35.9 bits (79), Expect(2) = 5e-07
Identities = 20/39 (51%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Frame = +2
Query: 230 ARVKCNVHRVNN-IDHTIYLRSSISSDKDVNTFSMTIRE 343
A+VK NV+RV+N I +I L + DKD+NTFSM +R+
Sbjct: 155 AKVKFNVNRVDNMIIQSISLLDQL--DKDINTFSMRVRQ 191
>BC032592-1|AAH32592.1| 529|Homo sapiens nucleolar protein
NOP5/NOP58 protein.
Length = 529
Score = 41.5 bits (93), Expect = 0.001
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 305 DKDVNTFSMTIREWYPYHFPELVSIVPEN 391
DK++N + M REWY +HFPEL I+ +N
Sbjct: 173 DKELNNYIMRCREWYGWHFPELGKIISDN 201
>BC009306-1|AAH09306.1| 522|Homo sapiens NOP5/NOP58 protein
protein.
Length = 522
Score = 41.5 bits (93), Expect = 0.001
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 305 DKDVNTFSMTIREWYPYHFPELVSIVPEN 391
DK++N + M REWY +HFPEL I+ +N
Sbjct: 173 DKELNNYIMRCREWYGWHFPELGKIISDN 201
>AF263608-1|AAF91394.1| 529|Homo sapiens nucleolar protein 5
protein.
Length = 529
Score = 41.5 bits (93), Expect = 0.001
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 305 DKDVNTFSMTIREWYPYHFPELVSIVPEN 391
DK++N + M REWY +HFPEL I+ +N
Sbjct: 173 DKELNNYIMRCREWYGWHFPELGKIISDN 201
>AF123534-1|AAD27610.1| 529|Homo sapiens nucleolar protein
NOP5/NOP58 protein.
Length = 529
Score = 41.5 bits (93), Expect = 0.001
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 305 DKDVNTFSMTIREWYPYHFPELVSIVPEN 391
DK++N + M REWY +HFPEL I+ +N
Sbjct: 173 DKELNNYIMRCREWYGWHFPELGKIISDN 201
>AC064836-1|AAY24145.1| 529|Homo sapiens unknown protein.
Length = 529
Score = 41.5 bits (93), Expect = 0.001
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 305 DKDVNTFSMTIREWYPYHFPELVSIVPEN 391
DK++N + M REWY +HFPEL I+ +N
Sbjct: 173 DKELNNYIMRCREWYGWHFPELGKIISDN 201
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,508,619
Number of Sequences: 237096
Number of extensions: 1239440
Number of successful extensions: 1960
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1960
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2698607930
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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