Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_D21
         (391 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    24   0.54 
DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein ...    22   2.2  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   2.2  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   2.2  
EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholi...    22   2.9  
EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholi...    21   3.8  
EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholi...    21   3.8  
EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholi...    21   3.8  
EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholi...    21   3.8  
EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholi...    21   3.8  
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    21   3.8  
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    21   3.8  
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              21   6.6  
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    21   6.6  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    21   6.6  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     20   8.7  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 24.2 bits (50), Expect = 0.54
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 173 DIKSMQCRTTGPLDIRILEA 232
           D+ ++ CRT+GP  + I+ A
Sbjct: 708 DLDNVMCRTSGPRGVAIVSA 727


>DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein 5
           protein.
          Length = 104

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 125 VGKTPLELAPDMTNNVCV*C 66
           +GK   EL P++ NN C  C
Sbjct: 49  IGKKIKELLPEVLNNHCNRC 68


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = -2

Query: 348 YHSLIVMENVLTSLSELIEERKYI 277
           Y  L ++ENV+ S  ELI +++++
Sbjct: 322 YKYLQLIENVIPSNEELICDKRFV 345


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = -2

Query: 348 YHSLIVMENVLTSLSELIEERKYI 277
           Y  L ++ENV+ S  ELI +++++
Sbjct: 337 YKYLQLIENVIPSNEELICDKRFV 360


>EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 6 protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -1

Query: 361 EVIWIPFSDRH 329
           +V W PF D+H
Sbjct: 114 DVAWFPFDDQH 124


>EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 5 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = -1

Query: 361 EVIWIPFSDRH 329
           ++ W PF D+H
Sbjct: 114 DIAWFPFDDQH 124


>EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 4 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = -1

Query: 361 EVIWIPFSDRH 329
           ++ W PF D+H
Sbjct: 114 DITWFPFDDQH 124


>EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 3 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = -1

Query: 361 EVIWIPFSDRH 329
           ++ W PF D+H
Sbjct: 114 DIAWFPFDDQH 124


>EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 2 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = -1

Query: 361 EVIWIPFSDRH 329
           ++ W PF D+H
Sbjct: 114 DIAWFPFDDQH 124


>EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 1 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = -1

Query: 361 EVIWIPFSDRH 329
           ++ W PF D+H
Sbjct: 114 DITWFPFDDQH 124


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = -1

Query: 361 EVIWIPFSDRH 329
           ++ W PF D+H
Sbjct: 182 DITWFPFDDQH 192


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = -1

Query: 361 EVIWIPFSDRH 329
           ++ W PF D+H
Sbjct: 182 DITWFPFDDQH 192


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = +2

Query: 236 VKCNVHRVNNIDHTIYLRSSISSD 307
           ++C + + N +D        ISSD
Sbjct: 63  IECTMKKFNVVDENANFNEKISSD 86


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 386 LGLCLPAPGSD 354
           +G CLP  GSD
Sbjct: 111 MGKCLPTSGSD 121


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 386 LGLCLPAPGSD 354
           +G CLP  GSD
Sbjct: 111 MGKCLPTSGSD 121


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 28  SAGSQIYELPSVKHYTHTLF 87
           S  S I + PS++ YT   F
Sbjct: 444 STSSHILQQPSIRTYTQQQF 463


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,650
Number of Sequences: 438
Number of extensions: 2583
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9514659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)