Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_D17
         (513 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051707-1|AAK93131.1|  482|Drosophila melanogaster LD24662p pro...    88   6e-18
AE014298-1742|AAF48133.1|  482|Drosophila melanogaster CG1796-PA...    88   6e-18
L14644-1|AAB88625.1| 2895|Drosophila melanogaster hyperplastic d...    29   3.7  
AE014297-1012|AAF54431.2| 2885|Drosophila melanogaster CG9484-PA...    29   3.7  

>AY051707-1|AAK93131.1|  482|Drosophila melanogaster LD24662p
           protein.
          Length = 482

 Score = 88.2 bits (209), Expect = 6e-18
 Identities = 46/104 (44%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
 Frame = +3

Query: 204 DDVIKHSVHTLVFRSLKRSHDMFLSNQGLLPPIDEKAEKILKMVKAKDSYGQVMGAVQNA 383
           +DV KHSVHTL+FRSLKR+HD+F+SNQG LP IDE+ EK+ + +KAKD YG V+  V   
Sbjct: 4   EDVQKHSVHTLIFRSLKRTHDLFVSNQGNLPEIDERLEKLRRSIKAKDGYGLVLDKVAKI 63

Query: 384 QAVKNQETINRP--ETPHDIEIAESAALGSEGLVVPYSGPALPA 509
              +       P  +T    + + + A    G +V Y+  A PA
Sbjct: 64  GEARKASGAQTPGDKTLAITDGSATDAASGAGSLVKYNAGARPA 107


>AE014298-1742|AAF48133.1|  482|Drosophila melanogaster CG1796-PA
           protein.
          Length = 482

 Score = 88.2 bits (209), Expect = 6e-18
 Identities = 46/104 (44%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
 Frame = +3

Query: 204 DDVIKHSVHTLVFRSLKRSHDMFLSNQGLLPPIDEKAEKILKMVKAKDSYGQVMGAVQNA 383
           +DV KHSVHTL+FRSLKR+HD+F+SNQG LP IDE+ EK+ + +KAKD YG V+  V   
Sbjct: 4   EDVQKHSVHTLIFRSLKRTHDLFVSNQGNLPEIDERLEKLRRSIKAKDGYGLVLDKVAKI 63

Query: 384 QAVKNQETINRP--ETPHDIEIAESAALGSEGLVVPYSGPALPA 509
              +       P  +T    + + + A    G +V Y+  A PA
Sbjct: 64  GEARKASGAQTPGDKTLAITDGSATDAASGAGSLVKYNAGARPA 107


>L14644-1|AAB88625.1| 2895|Drosophila melanogaster hyperplastic discs
            protein protein.
          Length = 2895

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +3

Query: 372  VQNAQAVKNQETINRPETPHDIEIAESAALGSEGLV 479
            +QNAQ  + +ETINR E    I++ +    G+  L+
Sbjct: 2679 IQNAQTKEGEETINRMELCFVIDLMKEEGCGNRELI 2714


>AE014297-1012|AAF54431.2| 2885|Drosophila melanogaster CG9484-PA
            protein.
          Length = 2885

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +3

Query: 372  VQNAQAVKNQETINRPETPHDIEIAESAALGSEGLV 479
            +QNAQ  + +ETINR E    I++ +    G+  L+
Sbjct: 2669 IQNAQTKEGEETINRMELCFVIDLMKEEGCGNRELI 2704


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,363,100
Number of Sequences: 53049
Number of extensions: 431129
Number of successful extensions: 853
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 853
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1867000320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)