Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_D15
(526 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D83785-1|BAA12114.2| 1042|Homo sapiens KIAA0200 protein. 35 0.15
AF221759-1|AAF34658.1| 893|Homo sapiens Mam1 protein. 35 0.15
EF363480-1|ABM69287.1| 235|Homo sapiens tongue cancer chemother... 32 1.4
D87470-1|BAA13408.1| 291|Homo sapiens KIAA0280 protein. 32 1.4
BC052341-1|AAH52341.1| 235|Homo sapiens KIAA0280 protein. 32 1.4
AJ009794-1|CAA08833.1| 362|Homo sapiens hug-1 protein. 32 1.4
BX247885-5|CAI95721.1| 1960|Homo sapiens protein ( Human DNA seq... 30 4.3
AL031346-1|CAB42440.1| 1641|Homo sapiens dJ597B2.1 (transcriptio... 30 4.3
AB006630-1|BAA22961.1| 1716|Homo sapiens KIAA0292 protein. 30 4.3
BC110818-1|AAI10819.1| 646|Homo sapiens CHD7 protein protein. 30 5.7
BC080627-1|AAH80627.1| 628|Homo sapiens CHD7 protein protein. 30 5.7
BC068000-1|AAH68000.1| 594|Homo sapiens CHD7 protein protein. 30 5.7
BC053890-1|AAH53890.1| 594|Homo sapiens CHD7 protein protein. 30 5.7
BC014681-1|AAH14681.1| 637|Homo sapiens Unknown (protein for IM... 30 5.7
AY515706-1|AAR99656.1| 668|Homo sapiens bestrophin 3 protein. 30 5.7
AK123158-1|BAC85544.1| 572|Homo sapiens protein ( Homo sapiens ... 30 5.7
AK096459-1|BAC04797.1| 668|Homo sapiens protein ( Homo sapiens ... 30 5.7
Y14372-2|CAB51806.1| 674|Homo sapiens gamma adducin protein. 29 7.6
Y14372-1|CAB51805.1| 706|Homo sapiens gamma adducin protein. 29 7.6
U37122-1|AAB17126.1| 675|Homo sapiens adducin gamma subunit pro... 29 7.6
D67031-1|BAA23783.1| 674|Homo sapiens adducin-like protein prot... 29 7.6
BC094780-1|AAH94780.1| 320|Homo sapiens VGLL3 protein protein. 29 7.6
BC062559-1|AAH62559.1| 706|Homo sapiens adducin 3 (gamma) protein. 29 7.6
AL590628-2|CAH71740.1| 706|Homo sapiens adducin 3 (gamma) protein. 29 7.6
AL590628-1|CAH71739.1| 674|Homo sapiens adducin 3 (gamma) protein. 29 7.6
AK223270-1|BAD96990.1| 667|Homo sapiens adducin 3 isoform a var... 29 7.6
AB209810-1|BAD93047.1| 698|Homo sapiens adducin 3 isoform a var... 29 7.6
AL512408-3|CAI23484.1| 2285|Homo sapiens AT rich interactive dom... 29 10.0
AL512408-2|CAI23483.1| 1175|Homo sapiens AT rich interactive dom... 29 10.0
AL512408-1|CAI23482.1| 1685|Homo sapiens AT rich interactive dom... 29 10.0
AL034380-9|CAI21623.1| 2285|Homo sapiens AT rich interactive dom... 29 10.0
AL034380-7|CAI21622.1| 1175|Homo sapiens AT rich interactive dom... 29 10.0
AL034380-6|CAI21621.1| 1685|Homo sapiens AT rich interactive dom... 29 10.0
AF521670-1|AAN03446.1| 1999|Homo sapiens SWI/SNF chromatin remod... 29 10.0
AF268913-1|AAK54505.1| 1685|Homo sapiens OSA1 nuclear protein pr... 29 10.0
AF265208-1|AAF75765.1| 1927|Homo sapiens SWI-SNF complex protein... 29 10.0
AF231056-1|AAG33967.1| 2285|Homo sapiens BRG1-Associated Factor ... 29 10.0
AF219114-1|AAG17549.2| 1939|Homo sapiens chromatin remodelling f... 29 10.0
AF034373-1|AAC69607.1| 1051|Homo sapiens ataxin-2-like protein A... 29 10.0
AB210022-1|BAE06104.1| 1374|Homo sapiens ARID1A variant protein ... 29 10.0
AB051293-1|BAB55599.1| 1208|Homo sapiens SWI related protein pro... 29 10.0
AB042328-1|BAB20584.1| 562|Homo sapiens membrane-type 6 matrix ... 29 10.0
AB024075-1|BAA83073.1| 1119|Homo sapiens B120 protein. 29 10.0
AB001895-1|BAA23269.1| 1142|Homo sapiens B120 protein. 29 10.0
>D83785-1|BAA12114.2| 1042|Homo sapiens KIAA0200 protein.
Length = 1042
Score = 35.1 bits (77), Expect = 0.15
Identities = 27/88 (30%), Positives = 41/88 (46%)
Frame = +1
Query: 253 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYSQPEVPIHQNMA 432
W P S +T P + NVSP + ++H ++ +PQ+SQ VP ++ MA
Sbjct: 865 WQHQGMPNLSGQT---PGNSNVSPFTAASSFHMQQQAH--LKMSSPQFSQA-VP-NRPMA 917
Query: 433 PIPISIPAGASLTPVSLQHVQLVPCMCP 516
P+ + G+ L PVS Q P P
Sbjct: 918 PMSSAAAVGSLLPPVSAQQRTSAPAPAP 945
>AF221759-1|AAF34658.1| 893|Homo sapiens Mam1 protein.
Length = 893
Score = 35.1 bits (77), Expect = 0.15
Identities = 27/88 (30%), Positives = 41/88 (46%)
Frame = +1
Query: 253 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYSQPEVPIHQNMA 432
W P S +T P + NVSP + ++H ++ +PQ+SQ VP ++ MA
Sbjct: 716 WQHQGMPNLSGQT---PGNSNVSPFTAASSFHMQQQAH--LKMSSPQFSQA-VP-NRPMA 768
Query: 433 PIPISIPAGASLTPVSLQHVQLVPCMCP 516
P+ + G+ L PVS Q P P
Sbjct: 769 PMSSAAAVGSLLPPVSAQQRTSAPAPAP 796
>EF363480-1|ABM69287.1| 235|Homo sapiens tongue cancer chemotherapy
resistance-associated protein 1 variant 2 protein.
Length = 235
Score = 31.9 bits (69), Expect = 1.4
Identities = 29/92 (31%), Positives = 37/92 (40%), Gaps = 7/92 (7%)
Frame = +1
Query: 226 ASSDAFFLKWGSD-SAPPSSQKTWVQPLSPNVSP------TIRYQYMYSPYESHKTYQLQ 384
ASS AF G+ PP+ T P SP+ +P IR Y + Y Q
Sbjct: 87 ASSAAFRYTAGTPYKVPPTQSNTAPPPYSPSPNPYQTAMYPIRSAYPQQNLYAQGAYYTQ 146
Query: 385 APQYSQPEVPIHQNMAPIPISIPAGASLTPVS 480
+QP V IH P SIP+ PV+
Sbjct: 147 PVYAAQPHV-IHHTTVVQPNSIPSAIYPAPVA 177
>D87470-1|BAA13408.1| 291|Homo sapiens KIAA0280 protein.
Length = 291
Score = 31.9 bits (69), Expect = 1.4
Identities = 29/92 (31%), Positives = 37/92 (40%), Gaps = 7/92 (7%)
Frame = +1
Query: 226 ASSDAFFLKWGSD-SAPPSSQKTWVQPLSPNVSP------TIRYQYMYSPYESHKTYQLQ 384
ASS AF G+ PP+ T P SP+ +P IR Y + Y Q
Sbjct: 143 ASSAAFRYTAGTPYKVPPTQSNTAPPPYSPSPNPYQTAMYPIRSAYPQQNLYAQGAYYTQ 202
Query: 385 APQYSQPEVPIHQNMAPIPISIPAGASLTPVS 480
+QP V IH P SIP+ PV+
Sbjct: 203 PVYAAQPHV-IHHTTVVQPNSIPSAIYPAPVA 233
>BC052341-1|AAH52341.1| 235|Homo sapiens KIAA0280 protein.
Length = 235
Score = 31.9 bits (69), Expect = 1.4
Identities = 29/92 (31%), Positives = 37/92 (40%), Gaps = 7/92 (7%)
Frame = +1
Query: 226 ASSDAFFLKWGSD-SAPPSSQKTWVQPLSPNVSP------TIRYQYMYSPYESHKTYQLQ 384
ASS AF G+ PP+ T P SP+ +P IR Y + Y Q
Sbjct: 87 ASSAAFRYTAGTPYKVPPTQSNTAPPPYSPSPNPYQTAMYPIRSAYPQQNLYAQGAYYTQ 146
Query: 385 APQYSQPEVPIHQNMAPIPISIPAGASLTPVS 480
+QP V IH P SIP+ PV+
Sbjct: 147 PVYAAQPHV-IHHTTVVQPNSIPSAIYPAPVA 177
>AJ009794-1|CAA08833.1| 362|Homo sapiens hug-1 protein.
Length = 362
Score = 31.9 bits (69), Expect = 1.4
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 346 YSPYESHKTYQLQAPQYSQPEVPIHQNMAPIPISIPAGASLTPVSLQH 489
+SPY+SH + S P VP+H ++ P P LT + L H
Sbjct: 66 WSPYKSHPCVTTNSSNNSCPAVPVHFTISTPPSIPPHWQGLTALVLLH 113
>BX247885-5|CAI95721.1| 1960|Homo sapiens protein ( Human DNA
sequence from clone RP4-669P10 on chromosome
22q13.31-13.33. ).
Length = 1960
Score = 30.3 bits (65), Expect = 4.3
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 6/35 (17%)
Frame = +1
Query: 376 QLQAPQYSQPEVPI------HQNMAPIPISIPAGA 462
Q Q QY+QPEVP+ HQN +PI PA +
Sbjct: 341 QSQVGQYNQPEVPVRSPMQFHQNFSPISNPSPAAS 375
>AL031346-1|CAB42440.1| 1641|Homo sapiens dJ597B2.1 (transcription
factor 20 (AR1, KIAA0292)) protein.
Length = 1641
Score = 30.3 bits (65), Expect = 4.3
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 6/35 (17%)
Frame = +1
Query: 376 QLQAPQYSQPEVPI------HQNMAPIPISIPAGA 462
Q Q QY+QPEVP+ HQN +PI PA +
Sbjct: 97 QSQVGQYNQPEVPVRSPMQFHQNFSPISNPSPAAS 131
>AB006630-1|BAA22961.1| 1716|Homo sapiens KIAA0292 protein.
Length = 1716
Score = 30.3 bits (65), Expect = 4.3
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 6/35 (17%)
Frame = +1
Query: 376 QLQAPQYSQPEVPI------HQNMAPIPISIPAGA 462
Q Q QY+QPEVP+ HQN +PI PA +
Sbjct: 97 QSQVGQYNQPEVPVRSPMQFHQNFSPISNPSPAAS 131
>BC110818-1|AAI10819.1| 646|Homo sapiens CHD7 protein protein.
Length = 646
Score = 29.9 bits (64), Expect = 5.7
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Frame = +1
Query: 274 PSSQKTWVQ-PLSPNVSPTIRYQYMYSPYESHKTYQLQ---APQYSQPEVPIHQNMAPIP 441
P Q ++ Q P P + P + SP H Q +PQ + +VP+HQ+ P
Sbjct: 502 PGQQPSFQQLPTCPPLQPHPGLHHQSSPPHPHHQPWAQLHPSPQNTPQKVPVHQHSPSEP 561
Query: 442 ISIPAGASLTPVSLQHVQLV 501
+T VS + QLV
Sbjct: 562 FLEKPVPDMTQVSGPNAQLV 581
>BC080627-1|AAH80627.1| 628|Homo sapiens CHD7 protein protein.
Length = 628
Score = 29.9 bits (64), Expect = 5.7
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Frame = +1
Query: 274 PSSQKTWVQ-PLSPNVSPTIRYQYMYSPYESHKTYQLQ---APQYSQPEVPIHQNMAPIP 441
P Q ++ Q P P + P + SP H Q +PQ + +VP+HQ+ P
Sbjct: 526 PGQQPSFQQLPTCPPLQPHPGLHHQSSPPHPHHQPWAQLHPSPQNTPQKVPVHQHSPSEP 585
Query: 442 ISIPAGASLTPVSLQHVQLV 501
+T VS + QLV
Sbjct: 586 FLEKPVPDMTQVSGPNAQLV 605
>BC068000-1|AAH68000.1| 594|Homo sapiens CHD7 protein protein.
Length = 594
Score = 29.9 bits (64), Expect = 5.7
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Frame = +1
Query: 274 PSSQKTWVQ-PLSPNVSPTIRYQYMYSPYESHKTYQLQ---APQYSQPEVPIHQNMAPIP 441
P Q ++ Q P P + P + SP H Q +PQ + +VP+HQ+ P
Sbjct: 496 PGQQPSFQQLPTCPPLQPHPGLHHQSSPPHPHHQPWAQLHPSPQNTPQKVPVHQHSPSEP 555
Query: 442 ISIPAGASLTPVSLQHVQLV 501
+T VS + QLV
Sbjct: 556 FLEKPVPDMTQVSGPNAQLV 575
>BC053890-1|AAH53890.1| 594|Homo sapiens CHD7 protein protein.
Length = 594
Score = 29.9 bits (64), Expect = 5.7
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Frame = +1
Query: 274 PSSQKTWVQ-PLSPNVSPTIRYQYMYSPYESHKTYQLQ---APQYSQPEVPIHQNMAPIP 441
P Q ++ Q P P + P + SP H Q +PQ + +VP+HQ+ P
Sbjct: 496 PGQQPSFQQLPTCPPLQPHPGLHHQSSPPHPHHQPWAQLHPSPQNTPQKVPVHQHSPSEP 555
Query: 442 ISIPAGASLTPVSLQHVQLV 501
+T VS + QLV
Sbjct: 556 FLEKPVPDMTQVSGPNAQLV 575
>BC014681-1|AAH14681.1| 637|Homo sapiens Unknown (protein for
IMAGE:3866722) protein.
Length = 637
Score = 29.9 bits (64), Expect = 5.7
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Frame = +1
Query: 274 PSSQKTWVQ-PLSPNVSPTIRYQYMYSPYESHKTYQLQ---APQYSQPEVPIHQNMAPIP 441
P Q ++ Q P P + P + SP H Q +PQ + +VP+HQ+ P
Sbjct: 496 PGQQPSFQQLPTCPPLQPHPGLHHQSSPPHPHHQPWAQLHPSPQNTPQKVPVHQHSPSEP 555
Query: 442 ISIPAGASLTPVSLQHVQLV 501
+T VS + QLV
Sbjct: 556 FLEKPVPDMTQVSGPNAQLV 575
>AY515706-1|AAR99656.1| 668|Homo sapiens bestrophin 3 protein.
Length = 668
Score = 29.9 bits (64), Expect = 5.7
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +1
Query: 271 PPSSQKTWVQPLSPNVSPTIRYQY--MYSPYESHKTYQLQA--PQYSQPEVPIHQNMAPI 438
PP + TW + P SPT+ + + + E+ +T LQ+ PQ S PI + P
Sbjct: 443 PPRASPTWKKSCFPEGSPTLHFSMGELSTIRETSQTSTLQSLTPQSSVRTSPIKMPLVP- 501
Query: 439 PISIPAGASLTPVS 480
+ I A + P S
Sbjct: 502 EVLITAAEAPVPTS 515
>AK123158-1|BAC85544.1| 572|Homo sapiens protein ( Homo sapiens
cDNA FLJ41163 fis, clone BRACE2039734. ).
Length = 572
Score = 29.9 bits (64), Expect = 5.7
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Frame = +1
Query: 274 PSSQKTWVQ-PLSPNVSPTIRYQYMYSPYESHKTYQLQ---APQYSQPEVPIHQNMAPIP 441
P Q ++ Q P P + P + SP H Q +PQ + +VP+HQ+ P
Sbjct: 258 PGQQPSFQQLPTCPPLQPHPGLHHQSSPPHPHHQPWAQLHPSPQNTPQKVPVHQHSPSEP 317
Query: 442 ISIPAGASLTPVSLQHVQLV 501
+T VS + QLV
Sbjct: 318 FLEKPVPDMTQVSGPNAQLV 337
>AK096459-1|BAC04797.1| 668|Homo sapiens protein ( Homo sapiens
cDNA FLJ39140 fis, clone NTONG2009233, moderately
similar to BESTROPHIN. ).
Length = 668
Score = 29.9 bits (64), Expect = 5.7
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +1
Query: 271 PPSSQKTWVQPLSPNVSPTIRYQY--MYSPYESHKTYQLQA--PQYSQPEVPIHQNMAPI 438
PP + TW + P SPT+ + + + E+ +T LQ+ PQ S PI + P
Sbjct: 443 PPRASPTWKKSCFPEGSPTLHFSMGELSTIRETSQTSTLQSLTPQSSVRTSPIKMPLVP- 501
Query: 439 PISIPAGASLTPVS 480
+ I A + P S
Sbjct: 502 EVLITAAEAPVPTS 515
>Y14372-2|CAB51806.1| 674|Homo sapiens gamma adducin protein.
Length = 674
Score = 29.5 bits (63), Expect = 7.6
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -1
Query: 427 YFGGSELRAESIAVL--AVDMFCAIHMANTYIDNGLSGRR*EIMVEPR 290
Y G +L +A L VD+F H+ANTYI +S + I++ PR
Sbjct: 130 YVKGEKLTRCKLASLYRLVDLFGWAHLANTYISVRISKEQDHIIIIPR 177
>Y14372-1|CAB51805.1| 706|Homo sapiens gamma adducin protein.
Length = 706
Score = 29.5 bits (63), Expect = 7.6
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -1
Query: 427 YFGGSELRAESIAVL--AVDMFCAIHMANTYIDNGLSGRR*EIMVEPR 290
Y G +L +A L VD+F H+ANTYI +S + I++ PR
Sbjct: 130 YVKGEKLTRCKLASLYRLVDLFGWAHLANTYISVRISKEQDHIIIIPR 177
>U37122-1|AAB17126.1| 675|Homo sapiens adducin gamma subunit
protein.
Length = 675
Score = 29.5 bits (63), Expect = 7.6
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -1
Query: 427 YFGGSELRAESIAVL--AVDMFCAIHMANTYIDNGLSGRR*EIMVEPR 290
Y G +L +A L VD+F H+ANTYI +S + I++ PR
Sbjct: 130 YVKGEKLTRCKLASLYRLVDLFGWAHLANTYISVRISKEQDHIIIIPR 177
>D67031-1|BAA23783.1| 674|Homo sapiens adducin-like protein
protein.
Length = 674
Score = 29.5 bits (63), Expect = 7.6
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -1
Query: 427 YFGGSELRAESIAVL--AVDMFCAIHMANTYIDNGLSGRR*EIMVEPR 290
Y G +L +A L VD+F H+ANTYI +S + I++ PR
Sbjct: 130 YVKGEKLTRCKLASLYRLVDLFGWAHLANTYISVRISKEQDHIIIIPR 177
>BC094780-1|AAH94780.1| 320|Homo sapiens VGLL3 protein protein.
Length = 320
Score = 29.5 bits (63), Expect = 7.6
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 271 PPSSQKTWVQPLSPNVSPTIRYQYMYSPYESH 366
PP+ ++W PL+ VSP+ Y +M+ Y H
Sbjct: 200 PPAVSESWPYPLTSQVSPS--YSHMHDVYMRH 229
>BC062559-1|AAH62559.1| 706|Homo sapiens adducin 3 (gamma) protein.
Length = 706
Score = 29.5 bits (63), Expect = 7.6
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -1
Query: 427 YFGGSELRAESIAVL--AVDMFCAIHMANTYIDNGLSGRR*EIMVEPR 290
Y G +L +A L VD+F H+ANTYI +S + I++ PR
Sbjct: 130 YVKGEKLTRCKLASLYRLVDLFGWAHLANTYISVRISKEQDHIIIIPR 177
>AL590628-2|CAH71740.1| 706|Homo sapiens adducin 3 (gamma) protein.
Length = 706
Score = 29.5 bits (63), Expect = 7.6
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -1
Query: 427 YFGGSELRAESIAVL--AVDMFCAIHMANTYIDNGLSGRR*EIMVEPR 290
Y G +L +A L VD+F H+ANTYI +S + I++ PR
Sbjct: 130 YVKGEKLTRCKLASLYRLVDLFGWAHLANTYISVRISKEQDHIIIIPR 177
>AL590628-1|CAH71739.1| 674|Homo sapiens adducin 3 (gamma) protein.
Length = 674
Score = 29.5 bits (63), Expect = 7.6
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -1
Query: 427 YFGGSELRAESIAVL--AVDMFCAIHMANTYIDNGLSGRR*EIMVEPR 290
Y G +L +A L VD+F H+ANTYI +S + I++ PR
Sbjct: 130 YVKGEKLTRCKLASLYRLVDLFGWAHLANTYISVRISKEQDHIIIIPR 177
>AK223270-1|BAD96990.1| 667|Homo sapiens adducin 3 isoform a
variant protein.
Length = 667
Score = 29.5 bits (63), Expect = 7.6
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -1
Query: 427 YFGGSELRAESIAVL--AVDMFCAIHMANTYIDNGLSGRR*EIMVEPR 290
Y G +L +A L VD+F H+ANTYI +S + I++ PR
Sbjct: 91 YVKGEKLTRCKLASLYRLVDLFGWAHLANTYISVRISKEQDHIIIIPR 138
>AB209810-1|BAD93047.1| 698|Homo sapiens adducin 3 isoform a
variant protein.
Length = 698
Score = 29.5 bits (63), Expect = 7.6
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -1
Query: 427 YFGGSELRAESIAVL--AVDMFCAIHMANTYIDNGLSGRR*EIMVEPR 290
Y G +L +A L VD+F H+ANTYI +S + I++ PR
Sbjct: 131 YVKGEKLTRCKLASLYRLVDLFGWAHLANTYISVRISKEQDHIIIIPR 178
>AL512408-3|CAI23484.1| 2285|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 2285
Score = 29.1 bits (62), Expect = 10.0
Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Frame = +1
Query: 253 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-QPEVPIH-QN 426
+ S P Q+ P+ +P + Y P Q P YS QP P H Q+
Sbjct: 471 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQS 530
Query: 427 MAPIP 441
AP P
Sbjct: 531 PAPYP 535
>AL512408-2|CAI23483.1| 1175|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 1175
Score = 29.1 bits (62), Expect = 10.0
Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Frame = +1
Query: 253 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-QPEVPIH-QN 426
+ S P Q+ P+ +P + Y P Q P YS QP P H Q+
Sbjct: 88 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQS 147
Query: 427 MAPIP 441
AP P
Sbjct: 148 PAPYP 152
>AL512408-1|CAI23482.1| 1685|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 1685
Score = 29.1 bits (62), Expect = 10.0
Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Frame = +1
Query: 253 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-QPEVPIH-QN 426
+ S P Q+ P+ +P + Y P Q P YS QP P H Q+
Sbjct: 88 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQS 147
Query: 427 MAPIP 441
AP P
Sbjct: 148 PAPYP 152
>AL034380-9|CAI21623.1| 2285|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 2285
Score = 29.1 bits (62), Expect = 10.0
Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Frame = +1
Query: 253 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-QPEVPIH-QN 426
+ S P Q+ P+ +P + Y P Q P YS QP P H Q+
Sbjct: 471 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQS 530
Query: 427 MAPIP 441
AP P
Sbjct: 531 PAPYP 535
>AL034380-7|CAI21622.1| 1175|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 1175
Score = 29.1 bits (62), Expect = 10.0
Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Frame = +1
Query: 253 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-QPEVPIH-QN 426
+ S P Q+ P+ +P + Y P Q P YS QP P H Q+
Sbjct: 88 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQS 147
Query: 427 MAPIP 441
AP P
Sbjct: 148 PAPYP 152
>AL034380-6|CAI21621.1| 1685|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 1685
Score = 29.1 bits (62), Expect = 10.0
Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Frame = +1
Query: 253 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-QPEVPIH-QN 426
+ S P Q+ P+ +P + Y P Q P YS QP P H Q+
Sbjct: 88 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQS 147
Query: 427 MAPIP 441
AP P
Sbjct: 148 PAPYP 152
>AF521670-1|AAN03446.1| 1999|Homo sapiens SWI/SNF chromatin
remodeling complex subunit OSA1 protein.
Length = 1999
Score = 29.1 bits (62), Expect = 10.0
Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Frame = +1
Query: 253 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-QPEVPIH-QN 426
+ S P Q+ P+ +P + Y P Q P YS QP P H Q+
Sbjct: 185 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQS 244
Query: 427 MAPIP 441
AP P
Sbjct: 245 PAPYP 249
>AF268913-1|AAK54505.1| 1685|Homo sapiens OSA1 nuclear protein
protein.
Length = 1685
Score = 29.1 bits (62), Expect = 10.0
Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Frame = +1
Query: 253 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-QPEVPIH-QN 426
+ S P Q+ P+ +P + Y P Q P YS QP P H Q+
Sbjct: 88 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQS 147
Query: 427 MAPIP 441
AP P
Sbjct: 148 PAPYP 152
>AF265208-1|AAF75765.1| 1927|Homo sapiens SWI-SNF complex protein
p270 protein.
Length = 1927
Score = 29.1 bits (62), Expect = 10.0
Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Frame = +1
Query: 253 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-QPEVPIH-QN 426
+ S P Q+ P+ +P + Y P Q P YS QP P H Q+
Sbjct: 113 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQS 172
Query: 427 MAPIP 441
AP P
Sbjct: 173 PAPYP 177
>AF231056-1|AAG33967.1| 2285|Homo sapiens BRG1-Associated Factor
250a protein.
Length = 2285
Score = 29.1 bits (62), Expect = 10.0
Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Frame = +1
Query: 253 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-QPEVPIH-QN 426
+ S P Q+ P+ +P + Y P Q P YS QP P H Q+
Sbjct: 471 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQS 530
Query: 427 MAPIP 441
AP P
Sbjct: 531 PAPYP 535
>AF219114-1|AAG17549.2| 1939|Homo sapiens chromatin remodelling
factor p250 protein.
Length = 1939
Score = 29.1 bits (62), Expect = 10.0
Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Frame = +1
Query: 253 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-QPEVPIH-QN 426
+ S P Q+ P+ +P + Y P Q P YS QP P H Q+
Sbjct: 125 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQS 184
Query: 427 MAPIP 441
AP P
Sbjct: 185 PAPYP 189
>AF034373-1|AAC69607.1| 1051|Homo sapiens ataxin-2-like protein A2LP
protein.
Length = 1051
Score = 29.1 bits (62), Expect = 10.0
Identities = 26/88 (29%), Positives = 36/88 (40%), Gaps = 6/88 (6%)
Frame = +1
Query: 211 ILAIVASSDAFFLKWGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAP 390
+ A + S+ L GS S T P + +P Y ++ Y H T QL A
Sbjct: 896 VFAPMLQSNPRMLTSGSHPQAIVSSSTPQYPSAEQPTPQALYATVHQSYPHHAT-QLHAH 954
Query: 391 QYSQPEV------PIHQNMAPIPISIPA 456
Q QP P Q+ AP P+ +PA
Sbjct: 955 Q-PQPATTPTGSQPQSQHAAPSPVQVPA 981
>AB210022-1|BAE06104.1| 1374|Homo sapiens ARID1A variant protein
protein.
Length = 1374
Score = 29.1 bits (62), Expect = 10.0
Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Frame = +1
Query: 253 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-QPEVPIH-QN 426
+ S P Q+ P+ +P + Y P Q P YS QP P H Q+
Sbjct: 125 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQS 184
Query: 427 MAPIP 441
AP P
Sbjct: 185 PAPYP 189
>AB051293-1|BAB55599.1| 1208|Homo sapiens SWI related protein
protein.
Length = 1208
Score = 29.1 bits (62), Expect = 10.0
Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Frame = +1
Query: 253 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-QPEVPIH-QN 426
+ S P Q+ P+ +P + Y P Q P YS QP P H Q+
Sbjct: 88 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQS 147
Query: 427 MAPIP 441
AP P
Sbjct: 148 PAPYP 152
>AB042328-1|BAB20584.1| 562|Homo sapiens membrane-type 6 matrix
metalloproteinase protein.
Length = 562
Score = 29.1 bits (62), Expect = 10.0
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 268 APPS-SQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYSQPEVPIHQNMAPIP 441
APP+ + K Q +S V RY Y+ P+ + QLQ+P+ + + + Q A +P
Sbjct: 16 APPARAPKPSAQDVSLGVDWLTRYGYLPPPHRAQA--QLQSPEKLRDAIKVMQRFAGLP 72
>AB024075-1|BAA83073.1| 1119|Homo sapiens B120 protein.
Length = 1119
Score = 29.1 bits (62), Expect = 10.0
Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Frame = +1
Query: 253 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-QPEVPIH-QN 426
+ S P Q+ P+ +P + Y P Q P YS QP P H Q+
Sbjct: 88 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQS 147
Query: 427 MAPIP 441
AP P
Sbjct: 148 PAPYP 152
>AB001895-1|BAA23269.1| 1142|Homo sapiens B120 protein.
Length = 1142
Score = 29.1 bits (62), Expect = 10.0
Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Frame = +1
Query: 253 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-QPEVPIH-QN 426
+ S P Q+ P+ +P + Y P Q P YS QP P H Q+
Sbjct: 88 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQS 147
Query: 427 MAPIP 441
AP P
Sbjct: 148 PAPYP 152
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,971,456
Number of Sequences: 237096
Number of extensions: 1824971
Number of successful extensions: 4339
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 4098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4335
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5046825278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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