Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_D14
(557 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50070-3|CAA90400.1| 134|Caenorhabditis elegans Hypothetical pr... 35 0.046
U50197-3|AAA91256.2| 327|Caenorhabditis elegans Hypothetical pr... 31 0.74
U49945-4|AAC47924.1| 535|Caenorhabditis elegans Hypothetical pr... 31 0.74
U40801-5|AAO91727.1| 777|Caenorhabditis elegans Hypothetical pr... 30 0.98
U40801-4|AAO91728.1| 873|Caenorhabditis elegans Hypothetical pr... 30 0.98
U40801-3|AAV34792.1| 1134|Caenorhabditis elegans Hypothetical pr... 30 0.98
Z82060-6|CAB04887.1| 301|Caenorhabditis elegans Hypothetical pr... 30 1.3
AF040654-2|AAK21449.2| 1014|Caenorhabditis elegans Hypothetical ... 30 1.3
U40029-11|AAA81130.1| 914|Caenorhabditis elegans Tudor staphylo... 29 1.7
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 29 1.7
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 1.7
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 1.7
AF016684-13|AAB66203.1| 470|Caenorhabditis elegans Hypothetical... 29 2.3
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 29 3.0
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 29 3.0
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 29 3.0
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 29 3.0
Z92780-8|CAI46553.1| 587|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z92780-7|CAI46552.1| 624|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z92780-6|CAI46551.1| 691|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z92780-5|CAI46550.1| 532|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z83236-4|CAB05781.1| 191|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z81068-16|CAJ30230.1| 587|Caenorhabditis elegans Hypothetical p... 28 5.2
Z81068-15|CAB02980.2| 624|Caenorhabditis elegans Hypothetical p... 28 5.2
Z81068-14|CAJ30229.1| 691|Caenorhabditis elegans Hypothetical p... 28 5.2
Z81068-13|CAJ30228.1| 532|Caenorhabditis elegans Hypothetical p... 28 5.2
Z81068-11|CAB02981.1| 454|Caenorhabditis elegans Hypothetical p... 28 5.2
EF443133-1|ABO31113.1| 656|Caenorhabditis elegans LIM-9 isoform... 28 5.2
AL031630-3|CAA20983.1| 140|Caenorhabditis elegans Hypothetical ... 28 5.2
Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical pr... 27 6.9
U41107-1|AAC71166.1| 220|Caenorhabditis elegans Hypothetical pr... 27 6.9
AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis p... 27 6.9
AF101318-6|AAC69348.2| 946|Caenorhabditis elegans Hypothetical ... 27 6.9
AC024809-3|AAF59541.3| 455|Caenorhabditis elegans Hypothetical ... 27 6.9
U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 27 9.1
U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical pr... 27 9.1
U29244-6|AAY55902.1| 130|Caenorhabditis elegans Hypothetical pr... 27 9.1
L14433-7|AAA27972.1| 469|Caenorhabditis elegans Hypothetical pr... 27 9.1
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. 27 9.1
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso... 27 9.1
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 27 9.1
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 27 9.1
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 27 9.1
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein. 27 9.1
>Z50070-3|CAA90400.1| 134|Caenorhabditis elegans Hypothetical
protein F43G6.2 protein.
Length = 134
Score = 34.7 bits (76), Expect = 0.046
Identities = 23/70 (32%), Positives = 29/70 (41%)
Frame = +1
Query: 55 AVTFGIFNFNKHNDTPDEIKPVKTPAEDVKKDEKPLPKRGVLVKRRTPKSVTDEDLEVKD 234
A T F F HN P D +KDEKP +G + K + V +
Sbjct: 10 AATLYHFAFCLHNLRRSPNSPFTVRNRDEQKDEKPYENKGKINKFFLDLTYFQLPYPVSE 69
Query: 235 KGPLRLEAKI 264
+ PLRL AKI
Sbjct: 70 RAPLRLRAKI 79
>U50197-3|AAA91256.2| 327|Caenorhabditis elegans Hypothetical
protein F25E2.3 protein.
Length = 327
Score = 30.7 bits (66), Expect = 0.74
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -2
Query: 220 DLHRLHF*VFAFLLKHPFSVTVFRLFSHLQLGFLPVLSRLVCHCV 86
D HRLH V A+L T R H++ GF+P +S + HC+
Sbjct: 230 DDHRLHQCVAAYLTDLSMLTTAVR--PHIRNGFIPSMSFSLDHCI 272
>U49945-4|AAC47924.1| 535|Caenorhabditis elegans Hypothetical
protein C02H7.1 protein.
Length = 535
Score = 30.7 bits (66), Expect = 0.74
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +1
Query: 76 NFNKHNDTPDEIKPVKTPAEDVKKDEKPLPKRGVLVKRRTPKSVTDEDLEVKDK 237
+FN N T +E K K ED K DE + K+R+ K T E+ E +K
Sbjct: 111 SFNSRNGTGEEKKKKKVKKEDKKGDE----EEKSTTKKRSSKKETHEEKEKSEK 160
>U40801-5|AAO91727.1| 777|Caenorhabditis elegans Hypothetical
protein F28E10.1b protein.
Length = 777
Score = 30.3 bits (65), Expect = 0.98
Identities = 18/80 (22%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +1
Query: 145 KDEKPLPKRGVLVKRRTPKSV-TDEDLEVKDKGPLRLEAKILNYQSPSLIYMSLVHQQKT 321
K E+P+PK ++ +TP+++ ++DK P + +S S +++S +K
Sbjct: 306 KYEEPVPKEKFILTMKTPEAIRRHHTFTIRDKSPEEMNKITKITKSQSDVHVSKRAAKKL 365
Query: 322 FNELFENIQRHYAKAKNEIV 381
+ E +R + K ++V
Sbjct: 366 VKQASEPERRDLFEEKEDVV 385
>U40801-4|AAO91728.1| 873|Caenorhabditis elegans Hypothetical
protein F28E10.1c protein.
Length = 873
Score = 30.3 bits (65), Expect = 0.98
Identities = 18/80 (22%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +1
Query: 145 KDEKPLPKRGVLVKRRTPKSV-TDEDLEVKDKGPLRLEAKILNYQSPSLIYMSLVHQQKT 321
K E+P+PK ++ +TP+++ ++DK P + +S S +++S +K
Sbjct: 402 KYEEPVPKEKFILTMKTPEAIRRHHTFTIRDKSPEEMNKITKITKSQSDVHVSKRAAKKL 461
Query: 322 FNELFENIQRHYAKAKNEIV 381
+ E +R + K ++V
Sbjct: 462 VKQASEPERRDLFEEKEDVV 481
>U40801-3|AAV34792.1| 1134|Caenorhabditis elegans Hypothetical
protein F28E10.1a protein.
Length = 1134
Score = 30.3 bits (65), Expect = 0.98
Identities = 18/80 (22%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +1
Query: 145 KDEKPLPKRGVLVKRRTPKSV-TDEDLEVKDKGPLRLEAKILNYQSPSLIYMSLVHQQKT 321
K E+P+PK ++ +TP+++ ++DK P + +S S +++S +K
Sbjct: 448 KYEEPVPKEKFILTMKTPEAIRRHHTFTIRDKSPEEMNKITKITKSQSDVHVSKRAAKKL 507
Query: 322 FNELFENIQRHYAKAKNEIV 381
+ E +R + K ++V
Sbjct: 508 VKQASEPERRDLFEEKEDVV 527
>Z82060-6|CAB04887.1| 301|Caenorhabditis elegans Hypothetical
protein T27F6.8 protein.
Length = 301
Score = 29.9 bits (64), Expect = 1.3
Identities = 29/132 (21%), Positives = 59/132 (44%), Gaps = 3/132 (2%)
Frame = +1
Query: 109 IKPVKTPAEDVKKDEKPLPKR---GVLVKRRTPKSVTDEDLEVKDKGPLRLEAKILNYQS 279
I+ PA KK L K+ G+L R + D++ + D P+ L +++ S
Sbjct: 10 IRSRSPPAVQKKKSSHNLLKKNSSGLLRFIRNNDKLLDDE-PIFDM-PMHLMLHVIDQMS 67
Query: 280 PSLIYMSLVHQQKTFNELFENIQRHYAKAKNEIVRKWELNDKCCTLCAQSQTWRRAVILE 459
+ + + E+ E+++ Y+K + +RK ++N+ C + A + + V +
Sbjct: 68 ----FFEQIRLARLCREVKEHLEEKYSKIRKLELRKRDINEACASDDAFERHSKAYVAIR 123
Query: 460 IQDKLAKVFYSD 495
I+D A + D
Sbjct: 124 IEDDTACLVIDD 135
>AF040654-2|AAK21449.2| 1014|Caenorhabditis elegans Hypothetical
protein R06B10.2 protein.
Length = 1014
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +1
Query: 25 INYEMIKHKFAVTFGIFNFNKHNDTPDEIKPVKTPAEDVKKDEKPL 162
I+ EM KH+ + + N N + DE+ +KT D KK KP+
Sbjct: 576 IDEEMKKHQLNPS-DVKNLNSLDGLEDELNRIKTAISDFKKSVKPV 620
>U40029-11|AAA81130.1| 914|Caenorhabditis elegans Tudor
staphylococcal nuclease homologprotein 1 protein.
Length = 914
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +1
Query: 400 DKCCTLCAQSQTWRRAVILEIQDKLAKVFYSDFASIETVPLSLLRELTSDFA 555
D C +Q W R + ++ A++ Y D+ + ET+ L ++ + FA
Sbjct: 745 DLCVAKFSQDGQWYRCKVESVRAGQAEIVYIDYGNRETIEAVKLAQIPAGFA 796
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 29.5 bits (63), Expect = 1.7
Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = +1
Query: 94 DTPDEIKPVKTPAEDVKKDEKPL-PKRGVLVKRRTPKSVTDEDLEVKDKGPLRLEAKILN 270
D P E P EDV K+E P P + + K P T E++ K+ P +
Sbjct: 3552 DVPKEAAPSGPTQEDVPKEEAPSEPTQEDVPKEAAPSEPTQENVP-KEAAPSEPTKDVPK 3610
Query: 271 YQSPSLIYMSLVHQQKTFNE 330
+PS V ++ T +E
Sbjct: 3611 EAAPSEPIQEEVPKEATLSE 3630
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 29.5 bits (63), Expect = 1.7
Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = +1
Query: 94 DTPDEIKPVKTPAEDVKKDEKPL-PKRGVLVKRRTPKSVTDEDLEVKDKGPLRLEAKILN 270
D P E P EDV K+E P P + + K P T E++ K+ P +
Sbjct: 3552 DVPKEAAPSGPTQEDVPKEEAPSEPTQEDVPKEAAPSEPTQENVP-KEAAPSEPTKDVPK 3610
Query: 271 YQSPSLIYMSLVHQQKTFNE 330
+PS V ++ T +E
Sbjct: 3611 EAAPSEPIQEEVPKEATLSE 3630
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 29.5 bits (63), Expect = 1.7
Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = +1
Query: 94 DTPDEIKPVKTPAEDVKKDEKPL-PKRGVLVKRRTPKSVTDEDLEVKDKGPLRLEAKILN 270
D P E P EDV K+E P P + + K P T E++ K+ P +
Sbjct: 3552 DVPKEAAPSGPTQEDVPKEEAPSEPTQEDVPKEAAPSEPTQENVP-KEAAPSEPTKDVPK 3610
Query: 271 YQSPSLIYMSLVHQQKTFNE 330
+PS V ++ T +E
Sbjct: 3611 EAAPSEPIQEEVPKEATLSE 3630
>AF016684-13|AAB66203.1| 470|Caenorhabditis elegans Hypothetical
protein F45C12.3 protein.
Length = 470
Score = 29.1 bits (62), Expect = 2.3
Identities = 28/111 (25%), Positives = 54/111 (48%), Gaps = 7/111 (6%)
Frame = +1
Query: 94 DTPDEIKPVKTPAEDVK-KDEK---PLPKRGVLVKRRTPK--SVTDEDLEVKDKGPLRLE 255
+ PDE++ +K P E K K E+ P P + ++K P S + + E++ G L +
Sbjct: 197 EKPDELEEIKDPREPEKPKPERLMGPEPSKD-MIKLEEPVLFSELERNKELEKPGELEDQ 255
Query: 256 AKILNY-QSPSLIYMSLVHQQKTFNELFENIQRHYAKAKNEIVRKWELNDK 405
+ +N + P + + + ++ E ++RH KNE R++E + K
Sbjct: 256 NEEVNGPEKPVELEEAEILEKPNEPMESETLERHQQLEKNEEPREYEEDKK 306
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 85 KHNDTPDEIKPVKTPAEDVKKDEKPLPKRGVLVKRRTPKSVTDEDLEVKDKGPLRLE 255
K +P ++ + PA KK++ P ++ V+ + ++PK + E E K K P + E
Sbjct: 1689 KKEKSPQTVE--EKPASPTKKEKSP--EKSVVEEVKSPKEKSPEKAEEKPKSPTKKE 1741
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 85 KHNDTPDEIKPVKTPAEDVKKDEKPLPKRGVLVKRRTPKSVTDEDLEVKDKGPLRLE 255
K +P ++ + PA KK++ P ++ V+ + ++PK + E E K K P + E
Sbjct: 1689 KKEKSPQTVE--EKPASPTKKEKSP--EKSVVEEVKSPKEKSPEKAEEKPKSPTKKE 1741
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 85 KHNDTPDEIKPVKTPAEDVKKDEKPLPKRGVLVKRRTPKSVTDEDLEVKDKGPLRLE 255
K +P ++ + PA KK++ P ++ V+ + ++PK + E E K K P + E
Sbjct: 1689 KKEKSPQTVE--EKPASPTKKEKSP--EKSVVEEVKSPKEKSPEKAEEKPKSPTKKE 1741
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 85 KHNDTPDEIKPVKTPAEDVKKDEKPLPKRGVLVKRRTPKSVTDEDLEVKDKGPLRLE 255
K +P ++ + PA KK++ P ++ V+ + ++PK + E E K K P + E
Sbjct: 1689 KKEKSPQTVE--EKPASPTKKEKSP--EKSVVEEVKSPKEKSPEKAEEKPKSPTKKE 1741
>Z92780-8|CAI46553.1| 587|Caenorhabditis elegans Hypothetical
protein F25H5.1b protein.
Length = 587
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 355 YAKAKNEIVRKWELNDKCCTLCAQSQTWRRAVILEIQDKLAKVFYSDFAS 504
Y KA N + W + CC C Q+ T +R ++ + Q K + FA+
Sbjct: 326 YTKAMN---KDWHSDHFCCWQCDQTLTGQRYIMRDEQPYCIKCYEDVFAN 372
>Z92780-7|CAI46552.1| 624|Caenorhabditis elegans Hypothetical
protein F25H5.1a protein.
Length = 624
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 355 YAKAKNEIVRKWELNDKCCTLCAQSQTWRRAVILEIQDKLAKVFYSDFAS 504
Y KA N + W + CC C Q+ T +R ++ + Q K + FA+
Sbjct: 363 YTKAMN---KDWHSDHFCCWQCDQTLTGQRYIMRDEQPYCIKCYEDVFAN 409
>Z92780-6|CAI46551.1| 691|Caenorhabditis elegans Hypothetical
protein F25H5.1f protein.
Length = 691
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 355 YAKAKNEIVRKWELNDKCCTLCAQSQTWRRAVILEIQDKLAKVFYSDFAS 504
Y KA N + W + CC C Q+ T +R ++ + Q K + FA+
Sbjct: 363 YTKAMN---KDWHSDHFCCWQCDQTLTGQRYIMRDEQPYCIKCYEDVFAN 409
>Z92780-5|CAI46550.1| 532|Caenorhabditis elegans Hypothetical
protein F25H5.1c protein.
Length = 532
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 355 YAKAKNEIVRKWELNDKCCTLCAQSQTWRRAVILEIQDKLAKVFYSDFAS 504
Y KA N + W + CC C Q+ T +R ++ + Q K + FA+
Sbjct: 271 YTKAMN---KDWHSDHFCCWQCDQTLTGQRYIMRDEQPYCIKCYEDVFAN 317
>Z83236-4|CAB05781.1| 191|Caenorhabditis elegans Hypothetical
protein K10H10.5 protein.
Length = 191
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = +1
Query: 73 FNFNKHNDTPDEIKPVKTPAEDVKKDEKPLPKRGVLVKRRTPKSVTDEDLEVKDK 237
F F+ D +++ K + DE PLP V + S +ED E DK
Sbjct: 77 FRFSDEEDDEEKVAHHKKKPIEEDDDEFPLPPNSEEVAEASKSSKKEEDWEDDDK 131
>Z81068-16|CAJ30230.1| 587|Caenorhabditis elegans Hypothetical
protein F25H5.1b protein.
Length = 587
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 355 YAKAKNEIVRKWELNDKCCTLCAQSQTWRRAVILEIQDKLAKVFYSDFAS 504
Y KA N + W + CC C Q+ T +R ++ + Q K + FA+
Sbjct: 326 YTKAMN---KDWHSDHFCCWQCDQTLTGQRYIMRDEQPYCIKCYEDVFAN 372
>Z81068-15|CAB02980.2| 624|Caenorhabditis elegans Hypothetical
protein F25H5.1a protein.
Length = 624
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 355 YAKAKNEIVRKWELNDKCCTLCAQSQTWRRAVILEIQDKLAKVFYSDFAS 504
Y KA N + W + CC C Q+ T +R ++ + Q K + FA+
Sbjct: 363 YTKAMN---KDWHSDHFCCWQCDQTLTGQRYIMRDEQPYCIKCYEDVFAN 409
>Z81068-14|CAJ30229.1| 691|Caenorhabditis elegans Hypothetical
protein F25H5.1f protein.
Length = 691
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 355 YAKAKNEIVRKWELNDKCCTLCAQSQTWRRAVILEIQDKLAKVFYSDFAS 504
Y KA N + W + CC C Q+ T +R ++ + Q K + FA+
Sbjct: 363 YTKAMN---KDWHSDHFCCWQCDQTLTGQRYIMRDEQPYCIKCYEDVFAN 409
>Z81068-13|CAJ30228.1| 532|Caenorhabditis elegans Hypothetical
protein F25H5.1c protein.
Length = 532
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 355 YAKAKNEIVRKWELNDKCCTLCAQSQTWRRAVILEIQDKLAKVFYSDFAS 504
Y KA N + W + CC C Q+ T +R ++ + Q K + FA+
Sbjct: 271 YTKAMN---KDWHSDHFCCWQCDQTLTGQRYIMRDEQPYCIKCYEDVFAN 317
>Z81068-11|CAB02981.1| 454|Caenorhabditis elegans Hypothetical
protein F25H5.1e protein.
Length = 454
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 355 YAKAKNEIVRKWELNDKCCTLCAQSQTWRRAVILEIQDKLAKVFYSDFAS 504
Y KA N + W + CC C Q+ T +R ++ + Q K + FA+
Sbjct: 193 YTKAMN---KDWHSDHFCCWQCDQTLTGQRYIMRDEQPYCIKCYEDVFAN 239
>EF443133-1|ABO31113.1| 656|Caenorhabditis elegans LIM-9 isoform
protein.
Length = 656
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 355 YAKAKNEIVRKWELNDKCCTLCAQSQTWRRAVILEIQDKLAKVFYSDFAS 504
Y KA N + W + CC C Q+ T +R ++ + Q K + FA+
Sbjct: 363 YTKAMN---KDWHSDHFCCWQCDQTLTGQRYIMRDEQPYCIKCYEDVFAN 409
>AL031630-3|CAA20983.1| 140|Caenorhabditis elegans Hypothetical
protein Y38H6C.3 protein.
Length = 140
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/73 (21%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Frame = +1
Query: 85 KHNDTPDEIKPVKTPAEDVKKDEKPLPKRGVLVKRRTPKSVTDE------DLEVKDKGPL 246
+ N+ + +K ++T + +K+ + +PK K R P+ + + DL + D+ P
Sbjct: 49 RRNENMERVKAIETASTSEQKNPEVVPKEPKPEKPRNPEELKKQNELNKIDLWIADEDPA 108
Query: 247 RLEAKILNYQSPS 285
R + + + PS
Sbjct: 109 RRKQPLNLHDHPS 121
>Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical protein
F18C12.2b protein.
Length = 2271
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/57 (24%), Positives = 26/57 (45%)
Frame = +1
Query: 334 FENIQRHYAKAKNEIVRKWELNDKCCTLCAQSQTWRRAVILEIQDKLAKVFYSDFAS 504
F + RH+ +++ + L C +C Q+ + R+ IL +Q+ F D S
Sbjct: 2058 FVELVRHHPNTADQLPSQGYLPQFCTAMCLQNTSASRSAILILQELSENQFCCDALS 2114
>Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical protein
F18C12.2a protein.
Length = 2279
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/57 (24%), Positives = 26/57 (45%)
Frame = +1
Query: 334 FENIQRHYAKAKNEIVRKWELNDKCCTLCAQSQTWRRAVILEIQDKLAKVFYSDFAS 504
F + RH+ +++ + L C +C Q+ + R+ IL +Q+ F D S
Sbjct: 2066 FVELVRHHPNTADQLPSQGYLPQFCTAMCLQNTSASRSAILILQELSENQFCCDALS 2122
>U41107-1|AAC71166.1| 220|Caenorhabditis elegans Hypothetical
protein F55C12.4 protein.
Length = 220
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/62 (19%), Positives = 28/62 (45%)
Frame = +1
Query: 250 LEAKILNYQSPSLIYMSLVHQQKTFNELFENIQRHYAKAKNEIVRKWELNDKCCTLCAQS 429
+ + + + +IY L + F+ L++ Q++ ++ R + +KC +C Q
Sbjct: 121 INGTVRSSSTTGMIYDKLANISSRFDNLWDGHQKNSMSMEDVTARISRVENKCLAVCQQH 180
Query: 430 QT 435
T
Sbjct: 181 DT 182
>AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis
protein RME-8 protein.
Length = 2279
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/57 (24%), Positives = 26/57 (45%)
Frame = +1
Query: 334 FENIQRHYAKAKNEIVRKWELNDKCCTLCAQSQTWRRAVILEIQDKLAKVFYSDFAS 504
F + RH+ +++ + L C +C Q+ + R+ IL +Q+ F D S
Sbjct: 2066 FVELVRHHPNTADQLPSQGYLPQFCTAMCLQNTSASRSAILILQELSENQFCCDALS 2122
>AF101318-6|AAC69348.2| 946|Caenorhabditis elegans Hypothetical
protein Y73C8C.8 protein.
Length = 946
Score = 27.5 bits (58), Expect = 6.9
Identities = 31/128 (24%), Positives = 54/128 (42%), Gaps = 3/128 (2%)
Frame = +1
Query: 106 EIKPVKTPAEDVKK-DEKPLPKRGVLVKRRTPKSVTDEDLEVKDKGPLRLEAKILNYQSP 282
E K VK+ + +K E P+ K PK + +K + LRLE +
Sbjct: 570 ESKRVKSKKQKKQKPSENPIAKPEEKQSNACPKCFRASEYNIKLRDDLRLEKIETKHLRK 629
Query: 283 SLIYMSLVHQQKTFNELFENIQRHYAKAKNEIVRKWELNDKCCTLCAQSQTWRRAV--IL 456
SL ++K+ +N + + KA+ E ++ L+ K + +T R + IL
Sbjct: 630 SLKLSQQESEEKSQKIAGKNEEIEHLKAQVETTKRELLDQKSELNHEKDETIRLQMEQIL 689
Query: 457 EIQDKLAK 480
+ Q+ L K
Sbjct: 690 DHQNALVK 697
>AC024809-3|AAF59541.3| 455|Caenorhabditis elegans Hypothetical
protein Y53G8AR.8 protein.
Length = 455
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 94 DTPDEIKPVKTPAEDVKKDEKPLP 165
+ PD++ P K PA+ +KD LP
Sbjct: 62 ERPDDLNPKKAPADMTRKDTGQLP 85
>U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical
protein C33G8.2 protein.
Length = 390
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +1
Query: 94 DTPDEIKPVKTPAEDVKKDEKPLPKRGVLVKRRTPKSVTDEDLEVKDK 237
D D+ K K +D DE K+ K++ K D+D E KDK
Sbjct: 213 DENDKKKDKKKKKDDKDDDENEDDKKKDKKKKKDDKEKDDDDEEEKDK 260
>U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical protein
C27F2.8 protein.
Length = 1715
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +1
Query: 40 IKHKFAV---TFGIFNFNKHNDTPDEIKPVKTPAEDVKKDEKPLP 165
I+ +FA+ F + N NK+N T + V + A+ +KP P
Sbjct: 1086 IRQQFAIPRHVFDLNNLNKNNSTTTPVPTVPSTAKPESSIKKPTP 1130
>U29244-6|AAY55902.1| 130|Caenorhabditis elegans Hypothetical
protein ZK1248.20 protein.
Length = 130
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +1
Query: 100 PDEIKPVKTPAEDVKKDEKPLPKRGVLVKRRTPKSVTDEDLEVKDK 237
PD A+ V K +KP PK + + + K + + +++ K+K
Sbjct: 47 PDGDAAAADAAKPVDKSQKPFPKFEMPTESKKKKKMAENEVDKKEK 92
>L14433-7|AAA27972.1| 469|Caenorhabditis elegans Hypothetical
protein C50C3.1 protein.
Length = 469
Score = 27.1 bits (57), Expect = 9.1
Identities = 24/105 (22%), Positives = 45/105 (42%)
Frame = +1
Query: 28 NYEMIKHKFAVTFGIFNFNKHNDTPDEIKPVKTPAEDVKKDEKPLPKRGVLVKRRTPKSV 207
+Y++ + K+ V + + N K ND P E++ + + + P G +P
Sbjct: 202 DYQINRMKWVV-YSVKNVKKQNDEPSEMR-IMEENRLTENNISRAPLFGTFDALDSPNLT 259
Query: 208 TDEDLEVKDKGPLRLEAKILNYQSPSLIYMSLVHQQKTFNELFEN 342
TD + + P+ I + SP I + Q T+ ++FEN
Sbjct: 260 TDAIIRARTPVPI-----ITSGSSPD-IPQCVSPVQNTYQQIFEN 298
>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
Length = 4250
Score = 27.1 bits (57), Expect = 9.1
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 196 PKSVTDEDLEVK-DKGPLRLEAKILNYQSPSLIYMSLVHQQKTFNELFENIQRHYAKAKN 372
P+ D +L V+ DKG R + KI PSL Y S H + + E+ + +++AK
Sbjct: 3250 PEDNGDYELVVRNDKGEARSKTKITVLPRPSLDYTSQTHGNQ--QDSLESHFKQHSQAKL 3307
Query: 373 EI 378
++
Sbjct: 3308 QL 3309
>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform b protein.
Length = 4203
Score = 27.1 bits (57), Expect = 9.1
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 196 PKSVTDEDLEVK-DKGPLRLEAKILNYQSPSLIYMSLVHQQKTFNELFENIQRHYAKAKN 372
P+ D +L V+ DKG R + KI PSL Y S H + + E+ + +++AK
Sbjct: 3167 PEDNGDYELVVRNDKGEARSKTKITVLPRPSLDYTSQTHGNQ--QDSLESHFKQHSQAKL 3224
Query: 373 EI 378
++
Sbjct: 3225 QL 3226
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform a protein.
Length = 4488
Score = 27.1 bits (57), Expect = 9.1
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 196 PKSVTDEDLEVK-DKGPLRLEAKILNYQSPSLIYMSLVHQQKTFNELFENIQRHYAKAKN 372
P+ D +L V+ DKG R + KI PSL Y S H + + E+ + +++AK
Sbjct: 3488 PEDNGDYELVVRNDKGEARSKTKITVLPRPSLDYTSQTHGNQ--QDSLESHFKQHSQAKL 3545
Query: 373 EI 378
++
Sbjct: 3546 QL 3547
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform d protein.
Length = 4369
Score = 27.1 bits (57), Expect = 9.1
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 196 PKSVTDEDLEVK-DKGPLRLEAKILNYQSPSLIYMSLVHQQKTFNELFENIQRHYAKAKN 372
P+ D +L V+ DKG R + KI PSL Y S H + + E+ + +++AK
Sbjct: 3488 PEDNGDYELVVRNDKGEARSKTKITVLPRPSLDYTSQTHGNQ--QDSLESHFKQHSQAKL 3545
Query: 373 EI 378
++
Sbjct: 3546 QL 3547
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform c protein.
Length = 4447
Score = 27.1 bits (57), Expect = 9.1
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 196 PKSVTDEDLEVK-DKGPLRLEAKILNYQSPSLIYMSLVHQQKTFNELFENIQRHYAKAKN 372
P+ D +L V+ DKG R + KI PSL Y S H + + E+ + +++AK
Sbjct: 3488 PEDNGDYELVVRNDKGEARSKTKITVLPRPSLDYTSQTHGNQ--QDSLESHFKQHSQAKL 3545
Query: 373 EI 378
++
Sbjct: 3546 QL 3547
>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
Length = 4219
Score = 27.1 bits (57), Expect = 9.1
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 196 PKSVTDEDLEVK-DKGPLRLEAKILNYQSPSLIYMSLVHQQKTFNELFENIQRHYAKAKN 372
P+ D +L V+ DKG R + KI PSL Y S H + + E+ + +++AK
Sbjct: 3183 PEDNGDYELVVRNDKGEARSKTKITVLPRPSLDYTSQTHGNQ--QDSLESHFKQHSQAKL 3240
Query: 373 EI 378
++
Sbjct: 3241 QL 3242
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,945,074
Number of Sequences: 27780
Number of extensions: 282476
Number of successful extensions: 1003
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 994
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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