Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_D14
         (557 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.           23   1.6  
AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.           23   1.6  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    23   1.6  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   1.6  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    22   4.8  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   8.4  

>AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/34 (35%), Positives = 13/34 (38%)
 Frame = -2

Query: 190 AFLLKHPFSVTVFRLFSHLQLGFLPVLSRLVCHC 89
           AF  K+P     F  F    L  LP   R   HC
Sbjct: 53  AFFKKYPEYQRYFTAFMDTPLNELPANKRFQAHC 86


>AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/34 (35%), Positives = 13/34 (38%)
 Frame = -2

Query: 190 AFLLKHPFSVTVFRLFSHLQLGFLPVLSRLVCHC 89
           AF  K+P     F  F    L  LP   R   HC
Sbjct: 53  AFFKKYPEYQRYFTAFMDTPLNELPANKRFQAHC 86


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 222 GGEGQGTSTLGSENTQLPIAVSNIHVA 302
           GG   GT+TL   N  +  A SN+ +A
Sbjct: 167 GGFMSGTATLDVYNADIMAATSNVIIA 193


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 222 GGEGQGTSTLGSENTQLPIAVSNIHVA 302
           GG   GT+TL   N  +  A SN+ +A
Sbjct: 167 GGFMSGTATLDVYNADIMAATSNVIIA 193


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +1

Query: 112 KPVKTPAEDVKKDEKPLPKRGVLVKR 189
           K +K   E+    ++PLP    L+KR
Sbjct: 119 KKIKKTMENKDITKRPLPNESQLIKR 144


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 193 TPKSVTDEDLEVKDKGP 243
           TP+ ++  D + KD+GP
Sbjct: 340 TPRIMSSFDFQSKDQGP 356


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,601
Number of Sequences: 438
Number of extensions: 3677
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16072521
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)