Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_D13
         (403 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S81027-1|AAB36035.1|  608|Drosophila melanogaster Msr-110 protein.     41   5e-04
BT001836-1|AAN71591.1|  617|Drosophila melanogaster RH50422p pro...    41   5e-04
AY118587-1|AAM49956.1|  608|Drosophila melanogaster LD44960p pro...    41   5e-04
AE014296-972|AAN12101.1|  625|Drosophila melanogaster CG10596-PC...    41   5e-04
AE014296-971|AAF50768.1|  617|Drosophila melanogaster CG10596-PA...    41   5e-04
AE014296-970|AAN12100.1|  608|Drosophila melanogaster CG10596-PB...    41   5e-04

>S81027-1|AAB36035.1|  608|Drosophila melanogaster Msr-110 protein.
          Length = 608

 Score = 41.1 bits (92), Expect = 5e-04
 Identities = 16/26 (61%), Positives = 20/26 (76%)
 Frame = +3

Query: 324 KLPIQFDLDDLAGAFLANNQKGRMNC 401
           K+P++ DL DLA A L NN+K RMNC
Sbjct: 160 KMPLELDLSDLAAAILRNNKKSRMNC 185


>BT001836-1|AAN71591.1|  617|Drosophila melanogaster RH50422p
           protein.
          Length = 617

 Score = 41.1 bits (92), Expect = 5e-04
 Identities = 16/26 (61%), Positives = 20/26 (76%)
 Frame = +3

Query: 324 KLPIQFDLDDLAGAFLANNQKGRMNC 401
           K+P++ DL DLA A L NN+K RMNC
Sbjct: 169 KMPLELDLSDLAAAILRNNRKSRMNC 194


>AY118587-1|AAM49956.1|  608|Drosophila melanogaster LD44960p
           protein.
          Length = 608

 Score = 41.1 bits (92), Expect = 5e-04
 Identities = 16/26 (61%), Positives = 20/26 (76%)
 Frame = +3

Query: 324 KLPIQFDLDDLAGAFLANNQKGRMNC 401
           K+P++ DL DLA A L NN+K RMNC
Sbjct: 160 KMPLELDLSDLAAAILRNNKKSRMNC 185


>AE014296-972|AAN12101.1|  625|Drosophila melanogaster CG10596-PC,
           isoform C protein.
          Length = 625

 Score = 41.1 bits (92), Expect = 5e-04
 Identities = 16/26 (61%), Positives = 20/26 (76%)
 Frame = +3

Query: 324 KLPIQFDLDDLAGAFLANNQKGRMNC 401
           K+P++ DL DLA A L NN+K RMNC
Sbjct: 177 KMPLELDLSDLAAAILRNNKKSRMNC 202


>AE014296-971|AAF50768.1|  617|Drosophila melanogaster CG10596-PA,
           isoform A protein.
          Length = 617

 Score = 41.1 bits (92), Expect = 5e-04
 Identities = 16/26 (61%), Positives = 20/26 (76%)
 Frame = +3

Query: 324 KLPIQFDLDDLAGAFLANNQKGRMNC 401
           K+P++ DL DLA A L NN+K RMNC
Sbjct: 169 KMPLELDLSDLAAAILRNNKKSRMNC 194


>AE014296-970|AAN12100.1|  608|Drosophila melanogaster CG10596-PB,
           isoform B protein.
          Length = 608

 Score = 41.1 bits (92), Expect = 5e-04
 Identities = 16/26 (61%), Positives = 20/26 (76%)
 Frame = +3

Query: 324 KLPIQFDLDDLAGAFLANNQKGRMNC 401
           K+P++ DL DLA A L NN+K RMNC
Sbjct: 160 KMPLELDLSDLAAAILRNNKKSRMNC 185


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,111,886
Number of Sequences: 53049
Number of extensions: 298023
Number of successful extensions: 997
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 997
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1170601320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)